Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 6
- nucleus 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH32292 | Soybean | cytosol, nucleus | 99.77 | 99.77 |
| KRH67524 | Soybean | nucleus | 99.1 | 98.43 |
| KRG95799 | Soybean | cytosol, nucleus | 98.87 | 98.21 |
| PGSC0003DMT400040872 | Potato | cytosol | 97.52 | 97.3 |
| Solyc06g083620.2.1 | Tomato | nucleus, plastid | 97.29 | 97.07 |
| VIT_07s0005g05160.t01 | Wine grape | cytosol | 97.29 | 96.85 |
| AT4G29040.1 | Thale cress | cytosol | 96.84 | 96.84 |
| PGSC0003DMT400051744 | Potato | cytosol | 96.84 | 96.62 |
| AT2G20140.1 | Thale cress | cytosol | 96.61 | 96.61 |
| CDY35245 | Canola | cytosol | 95.71 | 95.71 |
| Bra011079.1-P | Field mustard | cytosol | 95.71 | 95.71 |
| CDY06847 | Canola | cytosol | 95.49 | 95.49 |
| CDX92914 | Canola | cytosol, extracellular | 95.49 | 95.49 |
| CDY14224 | Canola | cytosol | 95.71 | 95.28 |
| CDX97472 | Canola | cytosol | 95.71 | 95.28 |
| Bra010342.1-P | Field mustard | cytosol | 95.71 | 95.28 |
| GSMUA_Achr4P05850_001 | Banana | cytosol | 90.74 | 94.81 |
| GSMUA_Achr4P05840_001 | Banana | cytosol | 89.62 | 94.3 |
| EER99961 | Sorghum | cytosol | 93.23 | 92.39 |
| Os03t0298400-01 | Rice | plasma membrane | 93.68 | 92.22 |
| Os07t0691800-01 | Rice | cytosol, nucleus, plasma membrane, plastid | 93.23 | 92.19 |
| Zm00001d022573_P001 | Maize | cytosol, extracellular, plasma membrane | 93.0 | 92.17 |
| TraesCS2B01G105700.1 | Wheat | cytosol | 92.55 | 91.31 |
| TraesCS2D01G087900.1 | Wheat | cytosol, golgi | 92.55 | 91.31 |
| TraesCS2A01G090000.1 | Wheat | cytosol | 92.33 | 91.09 |
| Zm00001d028801_P001 | Maize | cytosol, extracellular | 91.65 | 91.03 |
| TraesCS4D01G190600.1 | Wheat | cytosol, golgi | 92.1 | 90.67 |
| HORVU4Hr1G055060.1 | Barley | cytosol | 92.1 | 90.67 |
| TraesCS4B01G189200.1 | Wheat | cytosol | 91.87 | 90.44 |
| TraesCS4A01G115000.1 | Wheat | cytosol | 91.87 | 90.44 |
| Zm00001d007215_P001 | Maize | cytosol | 93.0 | 88.79 |
| HORVU2Hr1G014770.2 | Barley | cytosol, plastid | 86.23 | 86.62 |
| CDY59958 | Canola | cytosol | 62.75 | 76.37 |
| Bra024165.1-P | Field mustard | cytosol | 55.3 | 75.85 |
| HORVU3Hr1G095530.3 | Barley | mitochondrion, plastid | 41.99 | 74.1 |
| HORVU1Hr1G091080.1 | Barley | mitochondrion, plastid | 41.76 | 73.71 |
| KRH45565 | Soybean | endoplasmic reticulum | 28.44 | 61.76 |
| KRH30674 | Soybean | cytosol, nucleus | 42.44 | 45.52 |
| KRG98107 | Soybean | cytosol | 42.66 | 44.79 |
| KRH30673 | Soybean | cytosol, nucleus | 42.44 | 44.44 |
| KRH51796 | Soybean | cytosol | 38.15 | 42.46 |
| KRH61120 | Soybean | endoplasmic reticulum | 38.15 | 42.46 |
| KRH33891 | Soybean | endoplasmic reticulum, nucleus | 40.41 | 42.32 |
| KRG92899 | Soybean | cytosol, nucleus | 40.41 | 42.32 |
| KRH05868 | Soybean | cytosol, nucleus | 37.92 | 42.11 |
| KRH15139 | Soybean | cytosol, endoplasmic reticulum, nucleus | 37.92 | 42.11 |
| KRH44668 | Soybean | cytosol, mitochondrion, nucleus | 39.05 | 41.39 |
| KRH46990 | Soybean | nucleus | 39.05 | 41.39 |
| KRH68501 | Soybean | nucleus | 39.28 | 40.94 |
| KRG96790 | Soybean | mitochondrion | 29.8 | 39.76 |
| KRG97280 | Soybean | cytosol, nucleus | 37.25 | 38.73 |
| KRH06311 | Soybean | cytosol | 37.25 | 38.73 |
| KRH47728 | Soybean | cytosol, nucleus | 37.25 | 38.73 |
| KRH69005 | Soybean | nucleus | 37.25 | 38.73 |
| KRH06953 | Soybean | cytosol | 23.02 | 37.78 |
| KRH51488 | Soybean | mitochondrion | 35.67 | 37.35 |
| KRH00031 | Soybean | plastid | 23.48 | 30.14 |
| KRG99061 | Soybean | cytosol | 12.87 | 28.5 |
| KRG94277 | Soybean | cytosol | 11.96 | 25.6 |
| KRH45638 | Soybean | cytosol | 14.22 | 19.63 |
| KRH70928 | Soybean | cytosol | 25.73 | 18.81 |
| KRH25081 | Soybean | cytosol, endoplasmic reticulum, mitochondrion | 27.31 | 16.71 |
| KRH30601 | Soybean | cytosol | 29.57 | 16.25 |
| KRH26511 | Soybean | cytosol, endoplasmic reticulum, mitochondrion, nucleus | 29.57 | 16.23 |
| KRH22853 | Soybean | cytosol, endoplasmic reticulum, mitochondrion | 29.57 | 16.23 |
| KRH54357 | Soybean | cytosol, endoplasmic reticulum, mitochondrion | 29.12 | 15.85 |
| KRH63585 | Soybean | endoplasmic reticulum | 29.12 | 15.85 |
| KRH67721 | Soybean | endoplasmic reticulum, nucleus | 28.89 | 15.84 |
| KRH19916 | Soybean | endoplasmic reticulum, mitochondrion | 28.89 | 15.78 |
| KRH10420 | Soybean | mitochondrion | 17.61 | 15.76 |
| KRH32530 | Soybean | endoplasmic reticulum, mitochondrion | 28.89 | 15.74 |
| KRG96011 | Soybean | endoplasmic reticulum, mitochondrion, nucleus | 28.67 | 15.72 |
| KRH44049 | Soybean | nucleus | 27.09 | 15.17 |
| KRG96401 | Soybean | mitochondrion | 26.64 | 12.84 |
| KRH66707 | Soybean | plastid | 27.99 | 11.85 |
| KRH68139 | Soybean | cytosol | 16.7 | 11.04 |
| KRH50491 | Soybean | cytosol | 24.38 | 9.56 |
| KRG95054 | Soybean | plastid | 15.35 | 8.82 |
Protein Annotations
| Gene3D:1.10.8.60 | EntrezGene:100802442 | MapMan:19.2.6.2.1.2 | Gene3D:2.40.50.140 | InterPro:26S_Psome_P45-like | Gene3D:3.40.50.300 |
| UniProt:A0A0R4J4W3 | InterPro:AAA+_ATPase | EMBL:ACUP02008197 | InterPro:ATPase_AAA_CS | InterPro:ATPase_AAA_core | EnsemblPlantsGene:GLYMA_13G130400 |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 |
| GO:GO:0016787 | GO:GO:0019538 | GO:GO:0030163 | EnsemblPlants:KRH19693 | ProteinID:KRH19693 | ProteinID:KRH19693.1 |
| InterPro:P-loop_NTPase | PFAM:PF00004 | ScanProsite:PS00674 | PANTHER:PTHR23073 | PANTHER:PTHR23073:SF61 | SMART:SM00382 |
| SUPFAM:SSF52540 | TIGRFAMs:TIGR01242 | UniParc:UPI000189D0CE | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr13:-:24321747..24326039
Molecular Weight (calculated)
49346.8 Da
IEP (calculated)
6.074
GRAVY (calculated)
-0.441
Length
443 amino acids
Sequence
(BLAST)
(BLAST)
001: MGQGTPGGMN RQGDRKPDGG DKKEKKFEPS APPARVGRKQ RKQKGPEAAA RLPTVTPVTK CKLRLLKLER IKDYLLMEEE FVANQERLKP QEEKAEEDRS
101: KVDDLRGSPM SVGNLEELID ENHAIVSSSV GPEYYVGILS FVDKDQLEPG CAILMHNKVL SVVGLLQDEV DPMVSVMKVE KAPLESYADI GGLDAQIQEI
201: KEAVELPLTH PELYEDIGIK PPKGVILYGE PGTGKTLLAK AVANSTSATF LRVVGSELIQ KYLGDGPKLV RELFRVADDL SPSIVFIDEI DAVGTKRYDA
301: HSGGEREIQR TMLELLNQLD GFDSRGDVKV ILATNRIESL DPALLRPGRI DRKIEFPLPD IKTRRRIFQI HTSRMTLADD VNLEEFVMTK DEFSGADIKA
401: ICTEAGLLAL RERRMKVTHA DFKKAKDKVM FKKKEGVPEG LYM
101: KVDDLRGSPM SVGNLEELID ENHAIVSSSV GPEYYVGILS FVDKDQLEPG CAILMHNKVL SVVGLLQDEV DPMVSVMKVE KAPLESYADI GGLDAQIQEI
201: KEAVELPLTH PELYEDIGIK PPKGVILYGE PGTGKTLLAK AVANSTSATF LRVVGSELIQ KYLGDGPKLV RELFRVADDL SPSIVFIDEI DAVGTKRYDA
301: HSGGEREIQR TMLELLNQLD GFDSRGDVKV ILATNRIESL DPALLRPGRI DRKIEFPLPD IKTRRRIFQI HTSRMTLADD VNLEEFVMTK DEFSGADIKA
401: ICTEAGLLAL RERRMKVTHA DFKKAKDKVM FKKKEGVPEG LYM
001: MGQGPSGGLN RQGDRKPDGG DKKEKKFEPA APPARVGRKQ RKQKGPEAAA RLPTVTPSTK CKLRLLKLER IKDYLLMEEE FVANQERLKP QEEKAEEDRS
101: KVDDLRGTPM SVGNLEELID ENHAIVSSSV GPEYYVGILS FVDKDQLEPG CSILMHNKVL SVVGILQDEV DPMVSVMKVE KAPLESYADI GGLEAQIQEI
201: KEAVELPLTH PELYEDIGIK PPKGVILYGE PGTGKTLLAK AVANSTSATF LRVVGSELIQ KYLGDGPKLV RELFRVADDL SPSIVFIDEI DAVGTKRYDA
301: HSGGEREIQR TMLELLNQLD GFDSRGDVKV ILATNRIESL DPALLRPGRI DRKIEFPLPD IKTRRRIFQI HTSKMTLSED VNLEEFVMTK DEFSGADIKA
401: ICTEAGLLAL RERRMKVTHP DFKKAKEKVM FKKKEGVPEG LYM
101: KVDDLRGTPM SVGNLEELID ENHAIVSSSV GPEYYVGILS FVDKDQLEPG CSILMHNKVL SVVGILQDEV DPMVSVMKVE KAPLESYADI GGLEAQIQEI
201: KEAVELPLTH PELYEDIGIK PPKGVILYGE PGTGKTLLAK AVANSTSATF LRVVGSELIQ KYLGDGPKLV RELFRVADDL SPSIVFIDEI DAVGTKRYDA
301: HSGGEREIQR TMLELLNQLD GFDSRGDVKV ILATNRIESL DPALLRPGRI DRKIEFPLPD IKTRRRIFQI HTSKMTLSED VNLEEFVMTK DEFSGADIKA
401: ICTEAGLLAL RERRMKVTHP DFKKAKEKVM FKKKEGVPEG LYM
Arabidopsis Description
RPT2ARPT2a [Source:UniProtKB/TrEMBL;Acc:A0A178V3V3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.