CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH04812	Soybean	nucleus	92.18	89.55
KRH61975	Soybean	cytosol, nucleus, plastid	90.46	87.68
KRH52636	Soybean	endoplasmic reticulum	89.73	86.97
GSMUA_Achr9P29490_001	Banana	cytosol	81.17	84.05
CDX90170	Canola	cytosol, nucleus, plastid	83.62	81.62
CDX99790	Canola	cytosol, nucleus, plastid	83.62	81.62
CDY43320	Canola	extracellular	83.62	81.62
Bra010849.1-P	Field mustard	cytosol, nucleus, plastid	83.37	81.38
AT1G29150.1	Thale cress	cytosol, nucleus, plastid	83.37	81.38
Bra032291.1-P	Field mustard	cytosol, nucleus, plastid	83.13	81.15
CDY50790	Canola	cytosol	82.89	80.91
TraesCS2D01G310600.1	Wheat	cytosol, nucleus, plastid	81.66	79.15
Os04t0444600-01	Rice	plasma membrane	81.91	78.82
TraesCS4D01G349100.1	Wheat	cytosol, nucleus, plastid	81.66	78.4
TraesCS2B01G329100.1	Wheat	golgi, unclear	81.66	78.4
EES17355	Sorghum	plastid	81.42	78.17
TraesCS5A01G524900.1	Wheat	cytosol, nucleus, plastid	81.42	78.17
OQU81648	Sorghum	nucleus	81.42	78.17
Zm00001d041456_P001	Maize	extracellular	81.17	77.93
Zm00001d003566_P001	Maize	plasma membrane	82.15	77.78
Solyc05g013030.1.1	Tomato	plastid	80.44	77.78
Zm00001d003567_P001	Maize	cytosol, nucleus, plastid	81.91	77.55
PGSC0003DMT400072856	Potato	plastid	80.2	77.54
TraesCS2B01G285600.1	Wheat	golgi	80.44	77.41
TraesCS2D01G265800.1	Wheat	cytosol, nucleus, plastid	80.44	77.41
TraesCS2A01G257000.1	Wheat	cytosol, nucleus, plastid	80.2	77.18
HORVU2Hr1G064590.1	Barley	cytosol, nucleus, plastid	80.2	77.18
GSMUA_Achr10P...	Banana	cytosol	78.0	75.59
TraesCS4B01G355700.1	Wheat	nucleus	80.2	74.38
HORVU4Hr1G086010.2	Barley	plastid	81.17	72.65
CDY15648	Canola	cytosol, mitochondrion	49.88	70.1
HORVU2Hr1G077540.2	Barley	cytosol	81.66	68.16
CDX94649	Canola	endoplasmic reticulum	60.88	63.2
VIT_12s0034g00940.t01	Wine grape	extracellular	16.63	59.13
Os03t0576400-00	Rice	nucleus	15.89	59.09
VIT_15s0048g00130.t01	Wine grape	cytosol	4.4	47.37
KRH64921	Soybean	nucleus	19.32	18.0
KRH57710	Soybean	nucleus	19.07	17.77
KRG94968	Soybean	cytosol	19.32	17.56
KRG94272	Soybean	nucleus	18.83	17.54

Protein Annotations

Gene3D:1.25.40.570	MapMan:19.2.6.2.2.5	UniProt:A0A0R0GJV8	EMBL:ACUP02008819	ncoils:Coil	EnsemblPlantsGene:GLYMA_14G139600
GO:GO:0003674	GO:GO:0005198	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0006511	GO:GO:0008150	GO:GO:0008152	GO:GO:0008541	GO:GO:0009056
GO:GO:0009987	GO:GO:0016043	GO:GO:0019538	GO:GO:0043248	InterPro:IPR000717	EnsemblPlants:KRH16194
ProteinID:KRH16194	ProteinID:KRH16194.1	InterPro:PCI_dom	PFAM:PF01399	PFscan:PS50250	PANTHER:PTHR10678
PANTHER:PTHR10678:SF14	SMART:SM00088	SMART:SM00753	SUPFAM:SSF46785	UniParc:UPI0006ED86C3	InterPro:WH_DNA-bd_sf
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr14:+:26888267..26889515

Molecular Weight (calculated)

45861.6 Da

IEP (calculated)

5.215

GRAVY (calculated)

-0.023

Length

409 amino acids

Sequence
(BLAST)

001: MTSFLPATTE SLDLAVDAKD PSESISILYQ VLDYPSSSPD ALRMKEQAIT NLTEHLREQN RAEDLHSLLT QLRPFFSLIP KAKTAKIVRG IIDSVAKIPG
101: TTDLQITLCK EMVQWTRAEK HTFLRQRVEA RLAAFLMESK EYSEALTLLS SLVKEVRRLD DKLLLVDIDL LESKLHFSLR NLPKLLIYVP PAQQGSIDLQ
201: SGILHAEEKD SKTAYSYFFE AFESFNALDD PKAVFSQKYM LLCKIMVSQA DDVAGIISSK AGLQYLGPDL DAMKAVADAH SKRSLKLFEI ALRDFKAQLE
301: EDPIVHRHLS SMYDTLMEQN LCRLIEPFAR VEIAHIAELI ELPVDPVERK LSQMILDKLF AGTLDQGAGC LVIFDDSKTD AIYPATLETI SNIGKVVDSL
401: FVRSAKIVA

Best Arabidopsis Sequence Match ( AT1G29150.1 )
(BLAST)

001: MVSYRATTET ISLALEANSS EAITILYQVL EDPSSSPEAI RIKEQAITNL CDRLTEEKRG EDLRKLLTKL RPFFSLIPKA KTAKIVRGII DAVAKIPGTT
101: DLQITLCKEM VEWTRAEKRT FLRQRVEARL AALLMENKEY VEALALLSTL VKEVRRLDDK LLLVDIDLLE SKLHFSLRNL PKAKAALTAA RTAANAIYVP
201: PAQQGTIDLQ SGILHAEEKD YKTGYSYFFE AFESFNALGD PRAVFSLKYM LLCKIMVSQA DDVAGIISSK AGLQYVGPDL DAMKAVADAH SKRSLKLFEN
301: ALRDYKAQLE DDPIVHRHLS SLYDTLLEQN LCRLIEPFSR VEIAHIAELI GLPLDHVEKK LSQMILDKKF AGTLDQGAGC LIIFEDPKAD AIYSATLETI
401: ANMGKVVDSL YVRSAKIMS

Arabidopsis Description

RPN626S proteasome non-ATPase regulatory subunit 11 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9LP45]
SUBAcon: [plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.