Factsheet for GSMUA_Achr10P10460_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
mitochondrion 2
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P29490_001	Banana	cytosol	83.89	89.62
Os04t0444600-01	Rice	plasma membrane	84.83	84.24
KRH52636	Soybean	endoplasmic reticulum	84.12	84.12
KRH61975	Soybean	cytosol, nucleus, plastid	83.89	83.89
EES17355	Sorghum	plastid	84.36	83.57
Zm00001d041456_P001	Maize	extracellular	84.12	83.33
TraesCS2D01G310600.1	Wheat	cytosol, nucleus, plastid	83.18	83.18
TraesCS5A01G524900.1	Wheat	cytosol, nucleus, plastid	83.65	82.86
TraesCS4D01G349100.1	Wheat	cytosol, nucleus, plastid	83.18	82.39
AT1G29150.1	Thale cress	cytosol, nucleus, plastid	81.75	82.34
TraesCS2B01G329100.1	Wheat	golgi, unclear	82.94	82.16
OQU81648	Sorghum	nucleus	82.94	82.16
HORVU2Hr1G064590.1	Barley	cytosol, nucleus, plastid	82.7	82.12
CDY43320	Canola	extracellular	81.52	82.1
TraesCS2D01G265800.1	Wheat	cytosol, nucleus, plastid	82.46	81.88
TraesCS2B01G285600.1	Wheat	golgi	82.46	81.88
Zm00001d003566_P001	Maize	plasma membrane	83.65	81.71
TraesCS2A01G257000.1	Wheat	cytosol, nucleus, plastid	82.23	81.65
CDX90170	Canola	cytosol, nucleus, plastid	81.04	81.62
Zm00001d003567_P001	Maize	cytosol, nucleus, plastid	83.41	81.48
CDX99790	Canola	cytosol, nucleus, plastid	80.81	81.38
Bra010849.1-P	Field mustard	cytosol, nucleus, plastid	80.81	81.38
Solyc05g013030.1.1	Tomato	plastid	80.57	80.38
CDY50790	Canola	cytosol	79.62	80.19
Bra032291.1-P	Field mustard	cytosol, nucleus, plastid	79.62	80.19
PGSC0003DMT400072856	Potato	plastid	80.33	80.14
KRH04812	Soybean	nucleus	79.86	80.05
TraesCS4B01G355700.1	Wheat	nucleus	81.75	78.23
KRH16194	Soybean	cytosol	75.59	78.0
HORVU4Hr1G086010.2	Barley	plastid	83.41	77.02
HORVU2Hr1G077540.2	Barley	cytosol	83.89	72.24
CDY15648	Canola	cytosol, mitochondrion	48.82	70.79
VIT_12s0034g00940.t01	Wine grape	extracellular	18.72	68.7
CDX94649	Canola	endoplasmic reticulum	58.77	62.94
Os03t0576400-00	Rice	nucleus	15.64	60.0
VIT_15s0048g00130.t01	Wine grape	cytosol	4.5	50.0
GSMUA_Achr6P08520_001	Banana	cytosol	9.72	21.47
GSMUA_Achr6P23660_001	Banana	cytosol	21.09	20.55
GSMUA_AchrUn_...	Banana	cytosol	8.06	20.36

Protein Annotations

Gene3D:1.25.40.570	MapMan:19.2.6.2.2.5	ncoils:Coil	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
EnsemblPlantsGene:GSMUA_Achr10G10460_001	EnsemblPlants:GSMUA_Achr10P10460_001	EnsemblPlants:GSMUA_Achr10T10460_001	InterPro:IPR000717	InterPro:IPR011990	UniProt:M0RH22
InterPro:PCI_dom	PFAM:PF01399	PFscan:PS50250	PANTHER:PTHR10678	PANTHER:PTHR10678:SF14	SMART:SM00088
SMART:SM00753	SUPFAM:SSF46785	SUPFAM:SSF48452	InterPro:TPR-like_helical_dom_sf	UniParc:UPI00029531D1	InterPro:WH_DNA-bd_sf
SEG:seg	:	:	:	:	:

Description

26S proteasome non-ATPase regulatory subunit 11 [Source:GMGC_GENE;Acc:GSMUA_Achr10G10460_001]

Coordinates

chr10:+:19995209..19996477

Molecular Weight (calculated)

47315.6 Da

IEP (calculated)

6.080

GRAVY (calculated)

-0.041

Length

422 amino acids

Sequence
(BLAST)

001: MQSAYLPATT DSIAQALEAK DHAESISLLY RVLENPSSSS EAMHIKEQAI LNLTDLLTQE KKAEDLRGLL TQLRPFFSLI PKAKTAKIVR GIMDAVAKIP
101: GTSDLQISLC KEMVEWTRAE KRTFLRQRVE ARLAGLLMEN EEYSEALMLL SGLIKDVRRL DDKLLLVDIV ILESKLHFSL RNLPKAKAAL TAARTAANSI
201: YVPPAQQGMI DLQSGILHAE EKDYKTAYSY FFEAFEAFNA LEDPRAIFSL KYMLLCKIMV NQADDVASII ASKAGLQYLG PDLDAMKAVA DAHSKRSLKS
301: FETALRDYRV QLEEDPIVHR HLSSLYNTLL EQNLCRLIEP YSRVEIVHIA EMIELPMDHV EKKLSQMVLD RKFAGILDQG PGCLIIFDDP KADAIFPATL
401: ETVTNVGKVV DSLYVRSSRI MA

Best Arabidopsis Sequence Match ( AT1G29150.1 )
(BLAST)

001: MVSYRATTET ISLALEANSS EAITILYQVL EDPSSSPEAI RIKEQAITNL CDRLTEEKRG EDLRKLLTKL RPFFSLIPKA KTAKIVRGII DAVAKIPGTT
101: DLQITLCKEM VEWTRAEKRT FLRQRVEARL AALLMENKEY VEALALLSTL VKEVRRLDDK LLLVDIDLLE SKLHFSLRNL PKAKAALTAA RTAANAIYVP
201: PAQQGTIDLQ SGILHAEEKD YKTGYSYFFE AFESFNALGD PRAVFSLKYM LLCKIMVSQA DDVAGIISSK AGLQYVGPDL DAMKAVADAH SKRSLKLFEN
301: ALRDYKAQLE DDPIVHRHLS SLYDTLLEQN LCRLIEPFSR VEIAHIAELI GLPLDHVEKK LSQMILDKKF AGTLDQGAGC LIIFEDPKAD AIYSATLETI
401: ANMGKVVDSL YVRSAKIMS

Arabidopsis Description

RPN626S proteasome non-ATPase regulatory subunit 11 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9LP45]
SUBAcon: [plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.