Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- extracellular 3
- mitochondrion 3
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY15648 | Canola | cytosol, mitochondrion | 59.13 | 23.37 |
| GSMUA_Achr9P29490_001 | Banana | cytosol | 72.17 | 21.01 |
| Bra010849.1-P | Field mustard | cytosol, nucleus, plastid | 73.04 | 20.05 |
| CDX90170 | Canola | cytosol, nucleus, plastid | 73.04 | 20.05 |
| CDY43320 | Canola | extracellular | 73.04 | 20.05 |
| AT1G29150.1 | Thale cress | cytosol, nucleus, plastid | 72.17 | 19.81 |
| CDX99790 | Canola | cytosol, nucleus, plastid | 72.17 | 19.81 |
| VIT_01s0182g00070.t01 | Wine grape | plastid | 72.17 | 19.67 |
| TraesCS2D01G310600.1 | Wheat | cytosol, nucleus, plastid | 72.17 | 19.67 |
| CDY50790 | Canola | cytosol | 71.3 | 19.57 |
| Bra032291.1-P | Field mustard | cytosol, nucleus, plastid | 71.3 | 19.57 |
| TraesCS5A01G524900.1 | Wheat | cytosol, nucleus, plastid | 72.17 | 19.48 |
| TraesCS4D01G349100.1 | Wheat | cytosol, nucleus, plastid | 72.17 | 19.48 |
| TraesCS2B01G329100.1 | Wheat | golgi, unclear | 72.17 | 19.48 |
| Os04t0444600-01 | Rice | plasma membrane | 71.3 | 19.29 |
| OQU81648 | Sorghum | nucleus | 71.3 | 19.25 |
| KRH61975 | Soybean | cytosol, nucleus, plastid | 70.43 | 19.19 |
| KRH52636 | Soybean | endoplasmic reticulum | 70.43 | 19.19 |
| KRH04812 | Soybean | nucleus | 69.57 | 19.0 |
| Zm00001d003567_P001 | Maize | cytosol, nucleus, plastid | 71.3 | 18.98 |
| Zm00001d003566_P001 | Maize | plasma membrane | 71.3 | 18.98 |
| TraesCS2A01G257000.1 | Wheat | cytosol, nucleus, plastid | 69.57 | 18.82 |
| TraesCS2B01G285600.1 | Wheat | golgi | 69.57 | 18.82 |
| TraesCS2D01G265800.1 | Wheat | cytosol, nucleus, plastid | 69.57 | 18.82 |
| HORVU2Hr1G064590.1 | Barley | cytosol, nucleus, plastid | 69.57 | 18.82 |
| Zm00001d041456_P001 | Maize | extracellular | 69.57 | 18.78 |
| EES17355 | Sorghum | plastid | 69.57 | 18.78 |
| GSMUA_Achr10P... | Banana | cytosol | 68.7 | 18.72 |
| TraesCS4B01G355700.1 | Wheat | nucleus | 71.3 | 18.59 |
| VIT_14s0030g01670.t01 | Wine grape | plastid | 73.04 | 18.34 |
| HORVU4Hr1G086010.2 | Barley | plastid | 72.17 | 18.16 |
| HORVU2Hr1G077540.2 | Barley | cytosol | 72.17 | 16.94 |
| KRH16194 | Soybean | cytosol | 59.13 | 16.63 |
| CDX94649 | Canola | endoplasmic reticulum | 56.52 | 16.5 |
| VIT_08s0040g00430.t01 | Wine grape | cytosol | 23.48 | 6.14 |
| Os03t0576400-00 | Rice | nucleus | 3.48 | 3.64 |
| VIT_15s0048g00130.t01 | Wine grape | cytosol | 0.0 | 0.0 |
Protein Annotations
| Gene3D:1.25.40.570 | MapMan:35.1 | ProteinID:CCB48741 | ProteinID:CCB48741.1 | UniProt:F6H970 | EMBL:FN595497 |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003774 | GO:GO:0003777 | GO:GO:0003779 | GO:GO:0003824 |
| GO:GO:0003871 | GO:GO:0005198 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005524 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005856 | GO:GO:0006511 | GO:GO:0007018 | GO:GO:0008017 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008270 | GO:GO:0008541 | GO:GO:0009056 | GO:GO:0009058 |
| GO:GO:0009086 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0016459 | GO:GO:0016740 | GO:GO:0016787 |
| GO:GO:0019538 | GO:GO:0032259 | GO:GO:0043248 | PANTHER:PTHR10678 | PANTHER:PTHR10678:SF13 | UniParc:UPI0002109DCD |
| ArrayExpress:VIT_12s0034g00940 | EnsemblPlantsGene:VIT_12s0034g00940 | EnsemblPlants:VIT_12s0034g00940.t01 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr12:-:16760185..16760841
Molecular Weight (calculated)
13076.0 Da
IEP (calculated)
7.435
GRAVY (calculated)
0.164
Length
115 amino acids
Sequence
(BLAST)
(BLAST)
001: MYPCFVLHRK FSLNLICRLD DKLLLADIDL LESKLHFSLR NLPKARATLT AARISANAIY VPPAQQGTMD LQNGILHVEE TDYKTACSYF LEAFEAFYAL
101: GEPRAVFSLK YMLLS
101: GEPRAVFSLK YMLLS
001: MVSYRATTET ISLALEANSS EAITILYQVL EDPSSSPEAI RIKEQAITNL CDRLTEEKRG EDLRKLLTKL RPFFSLIPKA KTAKIVRGII DAVAKIPGTT
101: DLQITLCKEM VEWTRAEKRT FLRQRVEARL AALLMENKEY VEALALLSTL VKEVRRLDDK LLLVDIDLLE SKLHFSLRNL PKAKAALTAA RTAANAIYVP
201: PAQQGTIDLQ SGILHAEEKD YKTGYSYFFE AFESFNALGD PRAVFSLKYM LLCKIMVSQA DDVAGIISSK AGLQYVGPDL DAMKAVADAH SKRSLKLFEN
301: ALRDYKAQLE DDPIVHRHLS SLYDTLLEQN LCRLIEPFSR VEIAHIAELI GLPLDHVEKK LSQMILDKKF AGTLDQGAGC LIIFEDPKAD AIYSATLETI
401: ANMGKVVDSL YVRSAKIMS
101: DLQITLCKEM VEWTRAEKRT FLRQRVEARL AALLMENKEY VEALALLSTL VKEVRRLDDK LLLVDIDLLE SKLHFSLRNL PKAKAALTAA RTAANAIYVP
201: PAQQGTIDLQ SGILHAEEKD YKTGYSYFFE AFESFNALGD PRAVFSLKYM LLCKIMVSQA DDVAGIISSK AGLQYVGPDL DAMKAVADAH SKRSLKLFEN
301: ALRDYKAQLE DDPIVHRHLS SLYDTLLEQN LCRLIEPFSR VEIAHIAELI GLPLDHVEKK LSQMILDKKF AGTLDQGAGC LIIFEDPKAD AIYSATLETI
401: ANMGKVVDSL YVRSAKIMS
Arabidopsis Description
RPN626S proteasome non-ATPase regulatory subunit 11 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9LP45]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.