Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 2
- cytosol 2
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH61975 | Soybean | cytosol, nucleus, plastid | 90.38 | 84.6 |
| KRH52636 | Soybean | endoplasmic reticulum | 90.38 | 84.6 |
| AT1G29150.1 | Thale cress | cytosol, nucleus, plastid | 89.62 | 84.49 |
| CDX90170 | Canola | cytosol, nucleus, plastid | 89.62 | 84.49 |
| CDY43320 | Canola | extracellular | 89.62 | 84.49 |
| Bra010849.1-P | Field mustard | cytosol, nucleus, plastid | 89.37 | 84.25 |
| CDX99790 | Canola | cytosol, nucleus, plastid | 89.11 | 84.01 |
| GSMUA_Achr10P... | Banana | cytosol | 89.62 | 83.89 |
| CDY50790 | Canola | cytosol | 88.61 | 83.53 |
| Bra032291.1-P | Field mustard | cytosol, nucleus, plastid | 88.61 | 83.53 |
| KRH04812 | Soybean | nucleus | 88.35 | 82.9 |
| Os04t0444600-01 | Rice | plasma membrane | 88.61 | 82.35 |
| TraesCS2D01G310600.1 | Wheat | cytosol, nucleus, plastid | 87.85 | 82.23 |
| TraesCS5A01G524900.1 | Wheat | cytosol, nucleus, plastid | 88.61 | 82.16 |
| TraesCS4D01G349100.1 | Wheat | cytosol, nucleus, plastid | 88.1 | 81.69 |
| TraesCS2B01G329100.1 | Wheat | golgi, unclear | 88.1 | 81.69 |
| HORVU2Hr1G064590.1 | Barley | cytosol, nucleus, plastid | 87.59 | 81.41 |
| EES17355 | Sorghum | plastid | 87.59 | 81.22 |
| OQU81648 | Sorghum | nucleus | 87.59 | 81.22 |
| KRH16194 | Soybean | cytosol | 84.05 | 81.17 |
| Zm00001d041456_P001 | Maize | extracellular | 87.34 | 80.99 |
| TraesCS2B01G285600.1 | Wheat | golgi | 87.09 | 80.94 |
| TraesCS2D01G265800.1 | Wheat | cytosol, nucleus, plastid | 87.09 | 80.94 |
| TraesCS2A01G257000.1 | Wheat | cytosol, nucleus, plastid | 86.84 | 80.71 |
| Zm00001d003566_P001 | Maize | plasma membrane | 87.59 | 80.09 |
| Zm00001d003567_P001 | Maize | cytosol, nucleus, plastid | 87.34 | 79.86 |
| Solyc05g013030.1.1 | Tomato | plastid | 84.81 | 79.2 |
| PGSC0003DMT400072856 | Potato | plastid | 84.56 | 78.96 |
| TraesCS4B01G355700.1 | Wheat | nucleus | 86.58 | 77.55 |
| CDY15648 | Canola | cytosol, mitochondrion | 56.2 | 76.29 |
| HORVU4Hr1G086010.2 | Barley | plastid | 88.1 | 76.15 |
| VIT_12s0034g00940.t01 | Wine grape | extracellular | 21.01 | 72.17 |
| HORVU2Hr1G077540.2 | Barley | cytosol | 88.35 | 71.22 |
| CDX94649 | Canola | endoplasmic reticulum | 65.32 | 65.48 |
| VIT_15s0048g00130.t01 | Wine grape | cytosol | 5.32 | 55.26 |
| Os03t0576400-00 | Rice | nucleus | 12.41 | 44.55 |
| GSMUA_Achr6P08520_001 | Banana | cytosol | 10.89 | 22.51 |
| GSMUA_Achr6P23660_001 | Banana | cytosol | 22.53 | 20.55 |
| GSMUA_AchrUn_... | Banana | cytosol | 8.35 | 19.76 |
Protein Annotations
| Gene3D:1.25.40.570 | MapMan:19.2.6.2.2.5 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| EnsemblPlantsGene:GSMUA_Achr9G29490_001 | EnsemblPlants:GSMUA_Achr9P29490_001 | EnsemblPlants:GSMUA_Achr9T29490_001 | InterPro:IPR000717 | InterPro:IPR011990 | UniProt:M0U4K6 |
| InterPro:PCI_dom | PFAM:PF01399 | PFscan:PS50250 | PANTHER:PTHR10678 | PANTHER:PTHR10678:SF14 | SMART:SM00088 |
| SMART:SM00753 | SUPFAM:SSF46785 | SUPFAM:SSF48452 | InterPro:TPR-like_helical_dom_sf | UniParc:UPI000294DDE0 | InterPro:WH_DNA-bd_sf |
| SEG:seg | : | : | : | : | : |
Description
26S proteasome non-ATPase regulatory subunit 11 [Source:GMGC_GENE;Acc:GSMUA_Achr9G29490_001]
Coordinates
chr9:-:33183370..33184700
Molecular Weight (calculated)
44329.0 Da
IEP (calculated)
6.640
GRAVY (calculated)
-0.051
Length
395 amino acids
Sequence
(BLAST)
(BLAST)
001: MLYRVLENPS ASPEALRIKE QAITNLTELL TQEKKAEDLR SLLTQLRPFF SLIPKAKTAK IVRGIIDAVA KIPGTSDLQI SLCKEMVEWT RAEKRTFLRQ
101: RVEARLAALL MESKEYSEAL TLLSSLIKEV RRLDDKLLLV DIDLLESKLH FSLRNLPKAK AALTAARTAA NAIYVPPAQQ GTIDLQSGIL HAEEKDYKTA
201: YSYFFEAFEA FNALEDPRAV FSLKYMLLCK IMVSQADDVS GIISSKAGLQ YVGPDLDAMK AVADAHSKRS LKFFETALRD YRAQLEEDPI VHRHLSSLYD
301: TLLEQNLCRL IEPYSRVEIA HVAEMIELPV DHVEKKLSQM ILDKKFAGTL DQGAGCLVIF DDPKPDAIFP ATLETIANIG KVVDSLYVRS ARIMA
101: RVEARLAALL MESKEYSEAL TLLSSLIKEV RRLDDKLLLV DIDLLESKLH FSLRNLPKAK AALTAARTAA NAIYVPPAQQ GTIDLQSGIL HAEEKDYKTA
201: YSYFFEAFEA FNALEDPRAV FSLKYMLLCK IMVSQADDVS GIISSKAGLQ YVGPDLDAMK AVADAHSKRS LKFFETALRD YRAQLEEDPI VHRHLSSLYD
301: TLLEQNLCRL IEPYSRVEIA HVAEMIELPV DHVEKKLSQM ILDKKFAGTL DQGAGCLVIF DDPKPDAIFP ATLETIANIG KVVDSLYVRS ARIMA
001: MVSYRATTET ISLALEANSS EAITILYQVL EDPSSSPEAI RIKEQAITNL CDRLTEEKRG EDLRKLLTKL RPFFSLIPKA KTAKIVRGII DAVAKIPGTT
101: DLQITLCKEM VEWTRAEKRT FLRQRVEARL AALLMENKEY VEALALLSTL VKEVRRLDDK LLLVDIDLLE SKLHFSLRNL PKAKAALTAA RTAANAIYVP
201: PAQQGTIDLQ SGILHAEEKD YKTGYSYFFE AFESFNALGD PRAVFSLKYM LLCKIMVSQA DDVAGIISSK AGLQYVGPDL DAMKAVADAH SKRSLKLFEN
301: ALRDYKAQLE DDPIVHRHLS SLYDTLLEQN LCRLIEPFSR VEIAHIAELI GLPLDHVEKK LSQMILDKKF AGTLDQGAGC LIIFEDPKAD AIYSATLETI
401: ANMGKVVDSL YVRSAKIMS
101: DLQITLCKEM VEWTRAEKRT FLRQRVEARL AALLMENKEY VEALALLSTL VKEVRRLDDK LLLVDIDLLE SKLHFSLRNL PKAKAALTAA RTAANAIYVP
201: PAQQGTIDLQ SGILHAEEKD YKTGYSYFFE AFESFNALGD PRAVFSLKYM LLCKIMVSQA DDVAGIISSK AGLQYVGPDL DAMKAVADAH SKRSLKLFEN
301: ALRDYKAQLE DDPIVHRHLS SLYDTLLEQN LCRLIEPFSR VEIAHIAELI GLPLDHVEKK LSQMILDKKF AGTLDQGAGC LIIFEDPKAD AIYSATLETI
401: ANMGKVVDSL YVRSAKIMS
Arabidopsis Description
RPN626S proteasome non-ATPase regulatory subunit 11 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9LP45]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.