Factsheet for Os03t0576400-00

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os04t0444600-01	Rice	plasma membrane	83.64	21.65
TraesCS5A01G524900.1	Wheat	cytosol, nucleus, plastid	77.27	19.95
TraesCS4D01G349100.1	Wheat	cytosol, nucleus, plastid	77.27	19.95
TraesCS2B01G329100.1	Wheat	golgi, unclear	77.27	19.95
Zm00001d003567_P001	Maize	cytosol, nucleus, plastid	78.18	19.91
Zm00001d003566_P001	Maize	plasma membrane	78.18	19.91
TraesCS2D01G310600.1	Wheat	cytosol, nucleus, plastid	76.36	19.91
OQU81648	Sorghum	nucleus	75.45	19.48
TraesCS4B01G355700.1	Wheat	nucleus	77.27	19.27
HORVU4Hr1G086010.2	Barley	plastid	80.0	19.26
HORVU2Hr1G077540.2	Barley	cytosol	79.09	17.76
KRH61975	Soybean	cytosol, nucleus, plastid	64.55	16.82
KRH52636	Soybean	endoplasmic reticulum	63.64	16.59
KRH16194	Soybean	cytosol	59.09	15.89
KRH04812	Soybean	nucleus	60.0	15.68
GSMUA_Achr10P...	Banana	cytosol	60.0	15.64
Solyc05g013030.1.1	Tomato	plastid	57.27	14.89
PGSC0003DMT400072856	Potato	plastid	57.27	14.89
CDY43320	Canola	extracellular	56.36	14.8
CDY50790	Canola	cytosol	54.55	14.32
CDX99790	Canola	cytosol, nucleus, plastid	54.55	14.32
CDX90170	Canola	cytosol, nucleus, plastid	54.55	14.32
Bra032291.1-P	Field mustard	cytosol, nucleus, plastid	54.55	14.32
Bra010849.1-P	Field mustard	cytosol, nucleus, plastid	54.55	14.32
AT1G29150.1	Thale cress	cytosol, nucleus, plastid	53.64	14.08
GSMUA_Achr9P29490_001	Banana	cytosol	44.55	12.41
CDX94649	Canola	endoplasmic reticulum	37.27	10.41
VIT_12s0034g00940.t01	Wine grape	extracellular	3.64	3.48
Os01t0279200-02	Rice	plasma membrane	8.18	2.05
CDY15648	Canola	cytosol, mitochondrion	1.82	0.69
VIT_15s0048g00130.t01	Wine grape	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:Os03t0576400-00	EnsemblPlantsGene:Os03g0576400	Gene3D:1.25.40.570	PANTHER:PTHR10678	PANTHER:PTHR10678:SF14	ProteinID:BAS85024.1
UniParc:UPI0003938E77	UniProt:A0A0P0VZM1	MapMan:35.1	:	:	:

Description

Similar to 26S proteasome non-ATPase regulatory subunit 11. (Os03t0576400-00)

Coordinates

chr3:+:21078683..21079538

Molecular Weight (calculated)

12219.7 Da

IEP (calculated)

7.357

GRAVY (calculated)

-0.249

Length

110 amino acids

Sequence
(BLAST)

001: MHLYEQGAIM SSMESSCLPA TTESIAKAQE AKDASESISI LYRVLQDPSS SAEALRTKEL AITNLTNYLT KENRAEELRN LLTQLRPFFS LIPKAKTAKL
101: SVESSMLLPR

Best Arabidopsis Sequence Match ( AT1G29150.1 )
(BLAST)

001: MVSYRATTET ISLALEANSS EAITILYQVL EDPSSSPEAI RIKEQAITNL CDRLTEEKRG EDLRKLLTKL RPFFSLIPKA KTAKIVRGII DAVAKIPGTT
101: DLQITLCKEM VEWTRAEKRT FLRQRVEARL AALLMENKEY VEALALLSTL VKEVRRLDDK LLLVDIDLLE SKLHFSLRNL PKAKAALTAA RTAANAIYVP
201: PAQQGTIDLQ SGILHAEEKD YKTGYSYFFE AFESFNALGD PRAVFSLKYM LLCKIMVSQA DDVAGIISSK AGLQYVGPDL DAMKAVADAH SKRSLKLFEN
301: ALRDYKAQLE DDPIVHRHLS SLYDTLLEQN LCRLIEPFSR VEIAHIAELI GLPLDHVEKK LSQMILDKKF AGTLDQGAGC LIIFEDPKAD AIYSATLETI
401: ANMGKVVDSL YVRSAKIMS

Arabidopsis Description

RPN626S proteasome non-ATPase regulatory subunit 11 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9LP45]
SUBAcon: [plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.