Factsheet for HORVU4Hr1G086010.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
TargetP:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G524900.1	Wheat	cytosol, nucleus, plastid	90.59	97.18
TraesCS4D01G349100.1	Wheat	cytosol, nucleus, plastid	90.59	97.18
Os04t0444600-01	Rice	plasma membrane	87.53	94.12
TraesCS4B01G355700.1	Wheat	nucleus	89.28	92.52
OQU81648	Sorghum	nucleus	86.21	92.49
Zm00001d003566_P001	Maize	plasma membrane	87.31	92.36
Zm00001d003567_P001	Maize	cytosol, nucleus, plastid	87.09	92.13
HORVU2Hr1G064590.1	Barley	cytosol, nucleus, plastid	84.9	91.29
GSMUA_Achr9P29490_001	Banana	cytosol	76.15	88.1
KRH61975	Soybean	cytosol, nucleus, plastid	79.43	86.02
KRH52636	Soybean	endoplasmic reticulum	78.99	85.55
HORVU2Hr1G077540.2	Barley	cytosol	90.59	84.49
CDY43320	Canola	extracellular	76.81	83.77
GSMUA_Achr10P...	Banana	cytosol	77.02	83.41
CDX90170	Canola	cytosol, nucleus, plastid	76.37	83.29
AT1G29150.1	Thale cress	cytosol, nucleus, plastid	76.37	83.29
Bra010849.1-P	Field mustard	cytosol, nucleus, plastid	76.15	83.05
CDX99790	Canola	cytosol, nucleus, plastid	75.93	82.82
KRH04812	Soybean	nucleus	75.93	82.42
CDY50790	Canola	cytosol	75.49	82.34
Bra032291.1-P	Field mustard	cytosol, nucleus, plastid	75.49	82.34
KRH16194	Soybean	cytosol	72.65	81.17
Solyc05g013030.1.1	Tomato	plastid	74.84	80.85
PGSC0003DMT400072856	Potato	plastid	74.62	80.61
Os03t0576400-00	Rice	nucleus	19.26	80.0
CDY15648	Canola	cytosol, mitochondrion	46.83	73.54
VIT_12s0034g00940.t01	Wine grape	extracellular	18.16	72.17
CDX94649	Canola	endoplasmic reticulum	56.02	64.97
VIT_15s0048g00130.t01	Wine grape	cytosol	4.6	55.26
HORVU3Hr1G039980.8	Barley	nucleus	18.38	19.13

Protein Annotations

Gene3D:1.25.40.570	MapMan:19.2.6.2.2.5	UniProt:A0A287PZ14	ncoils:Coil	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	EnsemblPlantsGene:HORVU4Hr1G086010	EnsemblPlants:HORVU4Hr1G086010.2	InterPro:IPR000717	InterPro:IPR011990	InterPro:PCI_dom
PFAM:PF01399	PFscan:PS50250	PANTHER:PTHR10678	PANTHER:PTHR10678:SF14	SMART:SM00088	SMART:SM00753
SUPFAM:SSF46785	SUPFAM:SSF48452	InterPro:TPR-like_helical_dom_sf	UniParc:UPI000B46E26C	InterPro:WH_DNA-bd_sf	SEG:seg

Description

No Description!

Coordinates

chrchr4H:+:633178648..633181221

Molecular Weight (calculated)

50697.4 Da

IEP (calculated)

6.044

GRAVY (calculated)

-0.039

Length

457 amino acids

Sequence
(BLAST)

001: RSDPSASRAA IAIAVPVLPR VAPPPALQGG VMSSAMESSY LPATTESIAK AQEAKDASES ISILYRVIQD PSSSADALRA KELAITNLTN YLTEENRAED
101: LRNLLTQLRP FFSLIPKAKT AKIVRGIIDA VAKVPGTSDL QISLCKEMVE WTRAEKRTFL RQRVEARLAA LLLENQEYTE ALTLLTGLIK EVRRLDDKLL
201: LVDIDLLESK LHFSLRNLPK AKASLTAART AANAIYVPPA QQGTIDLQSG ILHAEEKDYK TAYSYFFEAF EAFNALEDPR AIFSLKYMLL CKIMVNQADD
301: VAGIISSKAS LNYVGPNVDA MKAVADAYSK RSLKFFETAL RDFKAQLEED PIVHRHLSSL YDTLLEQNLC RLIEPYSRVE IEHVAQMIEL PIDHVEKKLS
401: QMILDKKFAG TLDQGAGCLI IFEELKTEAI FPATLETISN VGKVVDSLYM RSAKIMA

Best Arabidopsis Sequence Match ( AT1G29150.1 )
(BLAST)

001: MVSYRATTET ISLALEANSS EAITILYQVL EDPSSSPEAI RIKEQAITNL CDRLTEEKRG EDLRKLLTKL RPFFSLIPKA KTAKIVRGII DAVAKIPGTT
101: DLQITLCKEM VEWTRAEKRT FLRQRVEARL AALLMENKEY VEALALLSTL VKEVRRLDDK LLLVDIDLLE SKLHFSLRNL PKAKAALTAA RTAANAIYVP
201: PAQQGTIDLQ SGILHAEEKD YKTGYSYFFE AFESFNALGD PRAVFSLKYM LLCKIMVSQA DDVAGIISSK AGLQYVGPDL DAMKAVADAH SKRSLKLFEN
301: ALRDYKAQLE DDPIVHRHLS SLYDTLLEQN LCRLIEPFSR VEIAHIAELI GLPLDHVEKK LSQMILDKKF AGTLDQGAGC LIIFEDPKAD AIYSATLETI
401: ANMGKVVDSL YVRSAKIMS

Arabidopsis Description

RPN626S proteasome non-ATPase regulatory subunit 11 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9LP45]
SUBAcon: [plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.