Factsheet for HORVU2Hr1G064590.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

nucleus 3
mitochondrion 2
cytosol 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G265800.1	Wheat	cytosol, nucleus, plastid	98.82	98.82
TraesCS2B01G285600.1	Wheat	golgi	98.82	98.82
TraesCS2A01G257000.1	Wheat	cytosol, nucleus, plastid	98.59	98.59
EES17355	Sorghum	plastid	92.94	92.72
Zm00001d041456_P001	Maize	extracellular	92.47	92.25
GSMUA_Achr9P29490_001	Banana	cytosol	81.41	87.59
KRH61975	Soybean	cytosol, nucleus, plastid	85.18	85.78
KRH52636	Soybean	endoplasmic reticulum	84.71	85.31
HORVU4Hr1G086010.2	Barley	plastid	91.29	84.9
AT1G29150.1	Thale cress	cytosol, nucleus, plastid	81.65	82.82
CDY43320	Canola	extracellular	81.65	82.82
GSMUA_Achr10P...	Banana	cytosol	82.12	82.7
CDX90170	Canola	cytosol, nucleus, plastid	81.18	82.34
KRH04812	Soybean	nucleus	81.41	82.19
Bra010849.1-P	Field mustard	cytosol, nucleus, plastid	80.94	82.1
CDX99790	Canola	cytosol, nucleus, plastid	80.71	81.86
CDY50790	Canola	cytosol	79.76	80.91
Bra032291.1-P	Field mustard	cytosol, nucleus, plastid	79.76	80.91
HORVU2Hr1G077540.2	Barley	cytosol	92.47	80.2
KRH16194	Soybean	cytosol	77.18	80.2
Solyc05g013030.1.1	Tomato	plastid	79.06	79.43
PGSC0003DMT400072856	Potato	plastid	78.82	79.2
CDY15648	Canola	cytosol, mitochondrion	50.35	73.54
VIT_12s0034g00940.t01	Wine grape	extracellular	18.82	69.57
CDX94649	Canola	endoplasmic reticulum	60.24	64.97
VIT_15s0048g00130.t01	Wine grape	cytosol	4.71	52.63
HORVU3Hr1G039980.8	Barley	nucleus	19.29	18.68

Protein Annotations

Gene3D:1.25.40.570	MapMan:19.2.6.2.2.5	ncoils:Coil	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
EnsemblPlantsGene:HORVU2Hr1G064590	EnsemblPlants:HORVU2Hr1G064590.1	InterPro:IPR000717	InterPro:IPR011990	UniProt:M0WYN7	InterPro:PCI_dom
PFAM:PF01399	PFscan:PS50250	PANTHER:PTHR10678	PANTHER:PTHR10678:SF14	SMART:SM00088	SMART:SM00753
SUPFAM:SSF46785	SUPFAM:SSF48452	InterPro:TPR-like_helical_dom_sf	UniParc:UPI00029595E4	InterPro:WH_DNA-bd_sf	SEG:seg

Description

No Description!

Coordinates

chrchr2H:+:438618104..438621961

Molecular Weight (calculated)

47402.5 Da

IEP (calculated)

5.399

GRAVY (calculated)

-0.018

Length

425 amino acids

Sequence
(BLAST)

001: MSVMQSSYLP ATPESIAMAQ EAKDASESIL ILYRVLEDPS SSSDAVRTKE VAITNLTNYL TIENRAEELR NLLTQLRPFF ALIPKAKTAK IVRGIIDAVS
101: KIPGTSDLQI SLCKEMVEWT RAEKRTFLRQ RVEARLAALL LESQEYTEAL TLLSGLIKEV RRLDDKLLLV DIDLLESKLH FSLRNLPKAK ASLTAARTAA
201: NAIYVPPAQQ GTIDLQSGIL HAEEKDYKTA YSYFFEAFEG FNALEDPKAI FCLKYMLLCK IMVNQADDVA GVISSKAGLK YVGPDVDAMK AVADAYSKRS
301: LKYFETALGD YKAQLEEDPI VHRHLSSLYD TLLEQNLCRL IEAYSRVEIA HVAEMIELPI EHVEKKLSQM ILDKKFAGTL DQGAGCLIIF EDAKTEAIFP
401: ATLETISNVG KVVESLYMRS AKIMA

Best Arabidopsis Sequence Match ( AT1G29150.1 )
(BLAST)

001: MVSYRATTET ISLALEANSS EAITILYQVL EDPSSSPEAI RIKEQAITNL CDRLTEEKRG EDLRKLLTKL RPFFSLIPKA KTAKIVRGII DAVAKIPGTT
101: DLQITLCKEM VEWTRAEKRT FLRQRVEARL AALLMENKEY VEALALLSTL VKEVRRLDDK LLLVDIDLLE SKLHFSLRNL PKAKAALTAA RTAANAIYVP
201: PAQQGTIDLQ SGILHAEEKD YKTGYSYFFE AFESFNALGD PRAVFSLKYM LLCKIMVSQA DDVAGIISSK AGLQYVGPDL DAMKAVADAH SKRSLKLFEN
301: ALRDYKAQLE DDPIVHRHLS SLYDTLLEQN LCRLIEPFSR VEIAHIAELI GLPLDHVEKK LSQMILDKKF AGTLDQGAGC LIIFEDPKAD AIYSATLETI
401: ANMGKVVDSL YVRSAKIMS

Arabidopsis Description

RPN626S proteasome non-ATPase regulatory subunit 11 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9LP45]
SUBAcon: [plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.