Factsheet for HORVU2Hr1G077540.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G310600.1	Wheat	cytosol, nucleus, plastid	84.69	98.34
TraesCS2B01G329100.1	Wheat	golgi, unclear	85.1	97.89
Os04t0444600-01	Rice	plasma membrane	82.45	95.06
OQU81648	Sorghum	nucleus	81.22	93.43
Zm00001d003566_P001	Maize	plasma membrane	81.84	92.82
Zm00001d003567_P001	Maize	cytosol, nucleus, plastid	81.63	92.59
HORVU2Hr1G064590.1	Barley	cytosol, nucleus, plastid	80.2	92.47
HORVU4Hr1G086010.2	Barley	plastid	84.49	90.59
GSMUA_Achr9P29490_001	Banana	cytosol	71.22	88.35
KRH61975	Soybean	cytosol, nucleus, plastid	74.49	86.49
KRH52636	Soybean	endoplasmic reticulum	74.08	86.02
CDY43320	Canola	extracellular	72.04	84.25
GSMUA_Achr10P...	Banana	cytosol	72.24	83.89
CDX90170	Canola	cytosol, nucleus, plastid	71.63	83.77
Bra010849.1-P	Field mustard	cytosol, nucleus, plastid	71.43	83.53
AT1G29150.1	Thale cress	cytosol, nucleus, plastid	71.22	83.29
CDX99790	Canola	cytosol, nucleus, plastid	71.02	83.05
KRH04812	Soybean	nucleus	71.22	82.9
CDY50790	Canola	cytosol	70.61	82.58
Bra032291.1-P	Field mustard	cytosol, nucleus, plastid	70.61	82.58
KRH16194	Soybean	cytosol	68.16	81.66
Solyc05g013030.1.1	Tomato	plastid	69.18	80.14
PGSC0003DMT400072856	Potato	plastid	68.98	79.91
Os03t0576400-00	Rice	nucleus	17.76	79.09
CDY15648	Canola	cytosol, mitochondrion	43.27	72.85
VIT_12s0034g00940.t01	Wine grape	extracellular	16.94	72.17
CDX94649	Canola	endoplasmic reticulum	52.04	64.72
VIT_15s0048g00130.t01	Wine grape	cytosol	4.49	57.89
HORVU3Hr1G039980.8	Barley	nucleus	17.35	19.36

Protein Annotations

Gene3D:1.25.40.570	MapMan:19.2.6.2.2.5	UniProt:A0A287IJ80	ncoils:Coil	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	EnsemblPlantsGene:HORVU2Hr1G077540	EnsemblPlants:HORVU2Hr1G077540.2	InterPro:IPR000717	InterPro:IPR011990	InterPro:PCI_dom
PFAM:PF01399	PFscan:PS50250	PANTHER:PTHR10678	PANTHER:PTHR10678:SF14	SMART:SM00088	SMART:SM00753
SUPFAM:SSF46785	SUPFAM:SSF48452	InterPro:TPR-like_helical_dom_sf	UniParc:UPI000B489022	InterPro:WH_DNA-bd_sf	SEG:seg

Description

No Description!

Coordinates

chrchr2H:-:560565187..560568710

Molecular Weight (calculated)

51137.1 Da

IEP (calculated)

6.421

GRAVY (calculated)

-0.037

Length

490 amino acids

Sequence
(BLAST)

001: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXPSLPFVA VLLRATGQIH PCSDRFLLLV QRMVMSSSMD SSYLPATTES IAMAQEAKDA SESISILYRV
101: IQDPSSSADA LRAKELAITN LTNYLTQENR AEELRNLLTQ LRPFFSLIPK AKTAKIVRGI IDAVSKIPGT SDLQISLCKE MVEWTRAEKR TFLRQRVEAR
201: LAALLLENQE YTEALTLLTG LIKEVRRLDD KLLLVDIDLL ESKLHFSLRN LPKAKASLTA ARTAANAIYV PPAQQGTIDL QSGILHAEEK DYKTAYSYFF
301: EAFEAFNALD DPRAIFSLKY MLLCKIMVNQ ADDVAGIISS KASLKYVGPD VDAMKAVADA YSKRSLKYFE TALRDFKSQL EEDPIVHRHL SSLYDTLLEQ
401: NLCRLIEPYS RVEIGHVAQM IELPVDHVEK KLSQMILDKK FAGTLDQGAG CLIIFEDQKT EAIFPATLET ISNVGKVVDS LYMRSAKIMA

Best Arabidopsis Sequence Match ( AT1G29150.1 )
(BLAST)

001: MVSYRATTET ISLALEANSS EAITILYQVL EDPSSSPEAI RIKEQAITNL CDRLTEEKRG EDLRKLLTKL RPFFSLIPKA KTAKIVRGII DAVAKIPGTT
101: DLQITLCKEM VEWTRAEKRT FLRQRVEARL AALLMENKEY VEALALLSTL VKEVRRLDDK LLLVDIDLLE SKLHFSLRNL PKAKAALTAA RTAANAIYVP
201: PAQQGTIDLQ SGILHAEEKD YKTGYSYFFE AFESFNALGD PRAVFSLKYM LLCKIMVSQA DDVAGIISSK AGLQYVGPDL DAMKAVADAH SKRSLKLFEN
301: ALRDYKAQLE DDPIVHRHLS SLYDTLLEQN LCRLIEPFSR VEIAHIAELI GLPLDHVEKK LSQMILDKKF AGTLDQGAGC LIIFEDPKAD AIYSATLETI
401: ANMGKVVDSL YVRSAKIMS

Arabidopsis Description

RPN626S proteasome non-ATPase regulatory subunit 11 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9LP45]
SUBAcon: [cytosol,nucleus,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.