Factsheet for VIT_15s0048g00130.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 3
nucleus 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	secretory
MultiLoc:	cytosol
Plant-mPloc:	cytosol, nucleus
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY15648	Canola	cytosol, mitochondrion	50.0	6.53
GSMUA_Achr9P29490_001	Banana	cytosol	55.26	5.32
Bra010849.1-P	Field mustard	cytosol, nucleus, plastid	57.89	5.25
Bra032291.1-P	Field mustard	cytosol, nucleus, plastid	57.89	5.25
CDX90170	Canola	cytosol, nucleus, plastid	57.89	5.25
CDX99790	Canola	cytosol, nucleus, plastid	57.89	5.25
CDY43320	Canola	extracellular	57.89	5.25
CDY50790	Canola	cytosol	57.89	5.25
VIT_01s0182g00070.t01	Wine grape	plastid	57.89	5.21
Os04t0444600-01	Rice	plasma membrane	57.89	5.18
TraesCS5A01G524900.1	Wheat	cytosol, nucleus, plastid	57.89	5.16
TraesCS4D01G349100.1	Wheat	cytosol, nucleus, plastid	57.89	5.16
OQU81648	Sorghum	nucleus	57.89	5.16
AT1G29150.1	Thale cress	cytosol, nucleus, plastid	55.26	5.01
TraesCS4B01G355700.1	Wheat	nucleus	57.89	4.99
Zm00001d003566_P001	Maize	plasma membrane	55.26	4.86
CDX94649	Canola	endoplasmic reticulum	50.0	4.82
VIT_14s0030g01670.t01	Wine grape	plastid	57.89	4.8
TraesCS2D01G310600.1	Wheat	cytosol, nucleus, plastid	52.63	4.74
TraesCS2A01G257000.1	Wheat	cytosol, nucleus, plastid	52.63	4.71
TraesCS2B01G285600.1	Wheat	golgi	52.63	4.71
TraesCS2D01G265800.1	Wheat	cytosol, nucleus, plastid	52.63	4.71
HORVU2Hr1G064590.1	Barley	cytosol, nucleus, plastid	52.63	4.71
Zm00001d041456_P001	Maize	extracellular	52.63	4.69
TraesCS2B01G329100.1	Wheat	golgi, unclear	52.63	4.69
EES17355	Sorghum	plastid	52.63	4.69
Zm00001d003567_P001	Maize	cytosol, nucleus, plastid	52.63	4.63
HORVU4Hr1G086010.2	Barley	plastid	55.26	4.6
KRH04812	Soybean	nucleus	50.0	4.51
KRH61975	Soybean	cytosol, nucleus, plastid	50.0	4.5
KRH52636	Soybean	endoplasmic reticulum	50.0	4.5
GSMUA_Achr10P...	Banana	cytosol	50.0	4.5
HORVU2Hr1G077540.2	Barley	cytosol	57.89	4.49
KRH16194	Soybean	cytosol	47.37	4.4
VIT_08s0040g00430.t01	Wine grape	cytosol	26.32	2.27
Os03t0576400-00	Rice	nucleus	0.0	0.0
VIT_12s0034g00940.t01	Wine grape	extracellular	0.0	0.0

Protein Annotations

MapMan:35.2	ProteinID:CCB61428	ProteinID:CCB61428.1	UniProt:F6I3B0	EMBL:FN596739	GO:GO:0000338
GO:GO:0003674	GO:GO:0003714	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0008180	GO:GO:0009058
GO:GO:0009987	GO:GO:0019538	GO:GO:0045892	UniParc:UPI0002109426	ArrayExpress:VIT_15s0048g00130	EnsemblPlantsGene:VIT_15s0048g00130
EnsemblPlants:VIT_15s0048g00130.t01	:	:	:	:	:

Description

No Description!

Coordinates

chr15:+:14228423..14228935

Molecular Weight (calculated)

4120.9 Da

IEP (calculated)

7.513

GRAVY (calculated)

-0.471

Length

38 amino acids

Sequence
(BLAST)

1: MPVDHVEKKL SQMILDTKFA GYGCHCKGHE GNTGSSLT

Best Arabidopsis Sequence Match ( AT1G29150.1 )
(BLAST)

001: MVSYRATTET ISLALEANSS EAITILYQVL EDPSSSPEAI RIKEQAITNL CDRLTEEKRG EDLRKLLTKL RPFFSLIPKA KTAKIVRGII DAVAKIPGTT
101: DLQITLCKEM VEWTRAEKRT FLRQRVEARL AALLMENKEY VEALALLSTL VKEVRRLDDK LLLVDIDLLE SKLHFSLRNL PKAKAALTAA RTAANAIYVP
201: PAQQGTIDLQ SGILHAEEKD YKTGYSYFFE AFESFNALGD PRAVFSLKYM LLCKIMVSQA DDVAGIISSK AGLQYVGPDL DAMKAVADAH SKRSLKLFEN
301: ALRDYKAQLE DDPIVHRHLS SLYDTLLEQN LCRLIEPFSR VEIAHIAELI GLPLDHVEKK LSQMILDKKF AGTLDQGAGC LIIFEDPKAD AIYSATLETI
401: ANMGKVVDSL YVRSAKIMS

Arabidopsis Description

RPN626S proteasome non-ATPase regulatory subunit 11 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9LP45]
SUBAcon: [plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.