Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr6P23660_001 | Banana | cytosol | 74.25 | 28.64 |
| GSMUA_Achr9P29490_001 | Banana | cytosol | 19.76 | 8.35 |
| GSMUA_Achr10P... | Banana | cytosol | 20.36 | 8.06 |
| GSMUA_Achr6P08520_001 | Banana | cytosol | 5.39 | 4.71 |
Protein Annotations
| EnsemblPlants:GSMUA_AchrUn_randomP28350_001 | EnsemblPlants:GSMUA_AchrUn_randomT28350_001 | EnsemblPlantsGene:GSMUA_AchrUn_randomG28350_001 | Gene3D:1.25.40.570 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0008180 | GO:GO:0016020 | GO:GO:0016021 | PANTHER:PTHR10678 |
| PANTHER:PTHR10678:SF3 | SEG:seg | TMHMM:TMhelix | UniParc:UPI000296DE7A | UniProt:M0UD43 | MapMan:19.2.3.3.1.2 |
Description
proteasome subunit, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG28350_001]
Coordinates
chrchrUn_random:+:137577404..137578149
Molecular Weight (calculated)
19551.8 Da
IEP (calculated)
9.098
GRAVY (calculated)
-0.415
Length
167 amino acids
Sequence
(BLAST)
(BLAST)
001: MMTAYREMLT YTKSAVTCNY SEKCINNIMD FVSGSANQNF DLLQEFYETT LKALEEAKNK RLWFKTNLKL CTIWFDMREY GQMGKILKEL HKSCRREDGT
101: DDQTKGTQLL EVYAIEIQMY TTKNNKKLKV GHSLCSLFIA SLISQLLLLN LSISYSKKYV NNYHKMN
101: DDQTKGTQLL EVYAIEIQMY TTKNNKKLKV GHSLCSLFIA SLISQLLLLN LSISYSKKYV NNYHKMN
001: MASDADMEDY GFEYSDEEQE EQDVDIENQY YNSKGMVETE PEEALSGFAE VVQMEPEKAD WGFKALKQTV KIYYRLGKYK EMMEAYTEML TYIKSAVTRN
101: YSEKCINNIM DFVSGSASQN TGLLQEFYQT TLKALEEAKN ERLWFKTNLK LCNIWFDIGE YRRMTKILKE LHKSCQKEDG TDDQKKGSQL LEVYAIEIQI
201: YTETKDNKKL KQLYHKALAI KSAIPHPRIM GIIRECGGKM HMAERQWEEA ATDFFEAFKN YDEAGNQRRI QCLKYLVLAN MLMESEVNPF DGQEAKPYKN
301: DPEILAMTNL IAAYQRNEII EFERILKSNR RTIMDDPFIR NYMEDLLKKV RTQVLLKLIK PYTKIGIPFI SKELNVPETD VTELLVSLIL DSRIDGHIDE
401: MNRYLLRGDS GNGRKLHKAV DKWNSQLKSL SSNITSRVC
101: YSEKCINNIM DFVSGSASQN TGLLQEFYQT TLKALEEAKN ERLWFKTNLK LCNIWFDIGE YRRMTKILKE LHKSCQKEDG TDDQKKGSQL LEVYAIEIQI
201: YTETKDNKKL KQLYHKALAI KSAIPHPRIM GIIRECGGKM HMAERQWEEA ATDFFEAFKN YDEAGNQRRI QCLKYLVLAN MLMESEVNPF DGQEAKPYKN
301: DPEILAMTNL IAAYQRNEII EFERILKSNR RTIMDDPFIR NYMEDLLKKV RTQVLLKLIK PYTKIGIPFI SKELNVPETD VTELLVSLIL DSRIDGHIDE
401: MNRYLLRGDS GNGRKLHKAV DKWNSQLKSL SSNITSRVC
Arabidopsis Description
CSN2COP9 signalosome complex subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:Q8W207]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.