Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G45000.1 | KRG96790 | AT1G09100.1 | 21798944 |
| AT1G45000.1 | KRH68501 | AT1G09100.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH61120 | Soybean | endoplasmic reticulum | 100.0 | 100.0 |
| KRH05868 | Soybean | cytosol, nucleus | 98.49 | 98.25 |
| KRH15139 | Soybean | cytosol, endoplasmic reticulum, nucleus | 98.24 | 98.0 |
| VIT_18s0001g13090.t01 | Wine grape | cytosol | 96.23 | 96.23 |
| GSMUA_AchrUn_... | Banana | cytosol | 96.48 | 95.76 |
| Bra035338.1-P | Field mustard | cytosol | 94.22 | 93.98 |
| CDY02428 | Canola | cytosol, extracellular | 94.22 | 93.98 |
| CDY25226 | Canola | cytosol | 94.22 | 93.98 |
| AT5G43010.1 | Thale cress | cytosol | 93.97 | 93.73 |
| AT1G45000.1 | Thale cress | cytosol | 93.97 | 93.73 |
| CDY22373 | Canola | cytosol | 93.97 | 93.73 |
| CDX71534 | Canola | cytosol | 93.97 | 93.73 |
| Bra033655.1-P | Field mustard | cytosol | 93.97 | 93.73 |
| GSMUA_Achr4P03720_001 | Banana | cytosol | 93.47 | 93.47 |
| TraesCS6D01G149500.1 | Wheat | cytosol | 84.42 | 93.33 |
| Os02t0199900-01 | Rice | nucleus, plasma membrane | 93.47 | 93.0 |
| GSMUA_Achr7P17620_001 | Banana | cytosol | 95.73 | 92.93 |
| Zm00001d015788_P001 | Maize | plasma membrane | 93.22 | 92.75 |
| Zm00001d053649_P002 | Maize | cytosol, mitochondrion | 93.22 | 92.75 |
| EES06471 | Sorghum | cytosol | 93.22 | 92.75 |
| TraesCS6A01G162700.2 | Wheat | cytosol, golgi | 92.71 | 92.25 |
| TraesCS6B01G188500.1 | Wheat | cytosol | 92.71 | 92.25 |
| TraesCS7A01G378600.1 | Wheat | cytosol | 91.96 | 91.5 |
| TraesCS7D01G375500.1 | Wheat | cytosol | 91.96 | 91.5 |
| TraesCS7B01G280400.1 | Wheat | cytosol, unclear | 91.96 | 91.5 |
| Zm00001d046539_P002 | Maize | cytosol, mitochondrion | 91.21 | 91.21 |
| EER88627 | Sorghum | cytosol | 90.95 | 90.95 |
| Os06t0607800-01 | Rice | nucleus | 91.46 | 90.77 |
| HORVU6Hr1G032570.5 | Barley | cytosol | 89.2 | 86.8 |
| HORVU7Hr1G090380.3 | Barley | cytosol | 91.96 | 83.94 |
| TraesCS7D01G532000.1 | Wheat | cytosol | 77.64 | 77.64 |
| TraesCS7B01G468900.1 | Wheat | cytosol | 76.63 | 76.63 |
| TraesCS7A01G545700.1 | Wheat | cytosol | 76.63 | 76.63 |
| HORVU7Hr1G119300.13 | Barley | cytosol | 77.39 | 76.62 |
| KRH51488 | Soybean | mitochondrion | 69.85 | 65.72 |
| KRH00031 | Soybean | plastid | 52.01 | 60.0 |
| KRH46990 | Soybean | nucleus | 43.97 | 41.87 |
| KRH44668 | Soybean | cytosol, mitochondrion, nucleus | 43.97 | 41.87 |
| KRH45565 | Soybean | endoplasmic reticulum | 20.1 | 39.22 |
| KRH69005 | Soybean | nucleus | 41.46 | 38.73 |
| KRH06311 | Soybean | cytosol | 41.46 | 38.73 |
| KRG97280 | Soybean | cytosol, nucleus | 41.46 | 38.73 |
| KRH47728 | Soybean | cytosol, nucleus | 41.46 | 38.73 |
| KRH32292 | Soybean | cytosol, nucleus | 42.46 | 38.15 |
| KRH19693 | Soybean | cytosol | 42.46 | 38.15 |
| KRH06953 | Soybean | cytosol | 25.88 | 38.15 |
| KRH30674 | Soybean | cytosol, nucleus | 39.45 | 38.01 |
| KRG95799 | Soybean | cytosol, nucleus | 42.21 | 37.67 |
| KRH67524 | Soybean | nucleus | 42.21 | 37.67 |
| KRG92899 | Soybean | cytosol, nucleus | 39.7 | 37.35 |
| KRH33891 | Soybean | endoplasmic reticulum, nucleus | 39.7 | 37.35 |
| KRG98107 | Soybean | cytosol | 38.94 | 36.73 |
| KRH30673 | Soybean | cytosol, nucleus | 38.94 | 36.64 |
| KRH68501 | Soybean | nucleus | 38.69 | 36.24 |
| KRG96790 | Soybean | mitochondrion | 29.4 | 35.24 |
| KRG99061 | Soybean | cytosol | 15.33 | 30.5 |
| KRG94277 | Soybean | cytosol | 13.32 | 25.6 |
| KRH45638 | Soybean | cytosol | 15.58 | 19.31 |
| KRH70928 | Soybean | cytosol | 27.39 | 17.99 |
| KRG96011 | Soybean | endoplasmic reticulum, mitochondrion, nucleus | 34.42 | 16.96 |
| KRH67721 | Soybean | endoplasmic reticulum, nucleus | 34.42 | 16.96 |
| KRH19916 | Soybean | endoplasmic reticulum, mitochondrion | 34.42 | 16.89 |
| KRH32530 | Soybean | endoplasmic reticulum, mitochondrion | 34.42 | 16.85 |
| KRH63585 | Soybean | endoplasmic reticulum | 34.42 | 16.83 |
| KRH54357 | Soybean | cytosol, endoplasmic reticulum, mitochondrion | 34.42 | 16.83 |
| KRH22853 | Soybean | cytosol, endoplasmic reticulum, mitochondrion | 33.92 | 16.73 |
| KRH25081 | Soybean | cytosol, endoplasmic reticulum, mitochondrion | 30.4 | 16.71 |
| KRH26511 | Soybean | cytosol, endoplasmic reticulum, mitochondrion, nucleus | 33.67 | 16.6 |
| KRH30601 | Soybean | cytosol | 33.17 | 16.38 |
| KRH44049 | Soybean | nucleus | 31.16 | 15.68 |
| KRH10420 | Soybean | mitochondrion | 18.84 | 15.15 |
| KRH66707 | Soybean | plastid | 31.41 | 11.95 |
| KRG96401 | Soybean | mitochondrion | 27.14 | 11.75 |
| KRH68139 | Soybean | cytosol | 17.59 | 10.45 |
| KRH50491 | Soybean | cytosol | 26.88 | 9.47 |
| KRG95054 | Soybean | plastid | 17.59 | 9.08 |
Protein Annotations
| Gene3D:1.10.8.60 | EntrezGene:100788475 | EntrezGene:100794489 | MapMan:19.2.6.2.1.4 | Gene3D:2.40.50.140 | InterPro:26S_Psome_P45-like |
| Gene3D:3.40.50.300 | UniProt:A0A0R4J305 | InterPro:AAA+_ATPase | EMBL:ACUP02002156 | EMBL:ACUP02003392 | InterPro:ATPase_AAA_CS |
| InterPro:ATPase_AAA_core | ncoils:Coil | EnsemblPlantsGene:GLYMA_06G029400 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0016787 | GO:GO:0019538 | GO:GO:0030163 |
| EnsemblPlants:KRH51796 | ProteinID:KRH51796 | ProteinID:KRH51796.1 | ProteinID:KRH61120.1 | InterPro:P-loop_NTPase | PFAM:PF00004 |
| ScanProsite:PS00674 | PANTHER:PTHR23073 | PANTHER:PTHR23073:SF58 | SMART:SM00382 | SUPFAM:SSF52540 | TIGRFAMs:TIGR01242 |
| UniParc:UPI000189D0C4 | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr6:+:2297315..2301087
Molecular Weight (calculated)
44582.1 Da
IEP (calculated)
8.422
GRAVY (calculated)
-0.353
Length
398 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEAEDAVRR RNAVAEYRKK LLQHKELESR VRSVRENLRA SKKEFNKTED DLKSLQSVGQ IIGEVLRPLD NERLIVKASS GPRYVVGCRS KVDKEKLTSG
101: TRVVLDMTTL TIMRALPREV DPVVYNMLHE DPGNISYSAV GGLSDQIREL RESIELPLMN PELFLRVGIK PPKGVLLYGP PGTGKTLLAR AIASNIDANF
201: LKVVSSAIID KYIGESARLI REMFGYARDH QPCIIFMDEI DAIGGRRFSE GTSADREIQR TLMELLNQLD GFDQLGKVKM IMATNRPDVL DPALLRPGRL
301: DRKIEIPLPN EQSRMEILKI HAAGIAKHGE IDYEAVVKLA EGFNGADLRN VCTEAGMAAI RAERDYVIHE DFMKAVRKLN EAKKLESSAH YSADFGKD
101: TRVVLDMTTL TIMRALPREV DPVVYNMLHE DPGNISYSAV GGLSDQIREL RESIELPLMN PELFLRVGIK PPKGVLLYGP PGTGKTLLAR AIASNIDANF
201: LKVVSSAIID KYIGESARLI REMFGYARDH QPCIIFMDEI DAIGGRRFSE GTSADREIQR TLMELLNQLD GFDQLGKVKM IMATNRPDVL DPALLRPGRL
301: DRKIEIPLPN EQSRMEILKI HAAGIAKHGE IDYEAVVKLA EGFNGADLRN VCTEAGMAAI RAERDYVIHE DFMKAVRKLN EAKKLESSAH YSADFGKD
001: MSDGDDAARR RTAAVTDYRK KLLHHKELES RVRTARENLR AAKKEFNKTE DDLKSLQSVG QIIGEVLRPL DNERLIVKAS SGPRYVVGCR SKVDKEKLTS
101: GTRVVLDMTT LTIMRALPRE VDPVVYNMLH EDPGNISYSA VGGLGDQIRE LRESIELPLM NPELFLRVGI KPPKGVLLYG PPGTGKTLLA RAIASNIDAN
201: FLKVVSSAII DKYIGESARL IREMFNYARE HQPCIIFMDE IDAIGGRRFS EGTSADREIQ RTLMELLNQL DGFDQLGKVK MIMATNRPDV LDPALLRPGR
301: LDRKIEIPLP NEQSRMEILK IHASGIAKHG EIDYEAIVKL GEGFNGADLR NICTEAGMFA IRAERDYVIH EDFMKAVRKL SEAKKLESSS HYNADFGKE
101: GTRVVLDMTT LTIMRALPRE VDPVVYNMLH EDPGNISYSA VGGLGDQIRE LRESIELPLM NPELFLRVGI KPPKGVLLYG PPGTGKTLLA RAIASNIDAN
201: FLKVVSSAII DKYIGESARL IREMFNYARE HQPCIIFMDE IDAIGGRRFS EGTSADREIQ RTLMELLNQL DGFDQLGKVK MIMATNRPDV LDPALLRPGR
301: LDRKIEIPLP NEQSRMEILK IHASGIAKHG EIDYEAIVKL GEGFNGADLR NICTEAGMFA IRAERDYVIH EDFMKAVRKL SEAKKLESSS HYNADFGKE
Arabidopsis Description
RPT4B26S protease regulatory subunit S10B homolog B [Source:UniProtKB/Swiss-Prot;Acc:Q9MAK9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.