Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU6Hr1G087650.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G43010.1 | HORVU6Hr1G087650.1 | AT3G05530.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G375500.1 | Wheat | cytosol | 91.51 | 99.75 |
| TraesCS7B01G280400.1 | Wheat | cytosol, unclear | 91.51 | 99.75 |
| TraesCS7A01G378600.1 | Wheat | cytosol | 91.28 | 99.5 |
| Os06t0607800-01 | Rice | nucleus | 86.47 | 94.02 |
| Zm00001d046539_P002 | Maize | cytosol, mitochondrion | 85.09 | 93.22 |
| EER88627 | Sorghum | cytosol | 85.09 | 93.22 |
| KRH61120 | Soybean | endoplasmic reticulum | 83.94 | 91.96 |
| KRH51796 | Soybean | cytosol | 83.94 | 91.96 |
| VIT_03s0038g04350.t01 | Wine grape | cytosol | 83.94 | 91.73 |
| KRH05868 | Soybean | cytosol, nucleus | 83.72 | 91.48 |
| KRH15139 | Soybean | cytosol, endoplasmic reticulum, nucleus | 83.49 | 91.23 |
| Solyc01g109940.2.1 | Tomato | nucleus | 83.03 | 90.95 |
| GSMUA_Achr4P03720_001 | Banana | cytosol | 83.03 | 90.95 |
| PGSC0003DMT400079514 | Potato | cytosol | 82.8 | 90.7 |
| VIT_18s0001g13090.t01 | Wine grape | cytosol | 82.8 | 90.7 |
| GSMUA_AchrUn_... | Banana | cytosol | 83.03 | 90.27 |
| AT1G45000.1 | Thale cress | cytosol | 82.57 | 90.23 |
| HORVU6Hr1G032570.5 | Barley | cytosol | 84.63 | 90.22 |
| AT5G43010.1 | Thale cress | cytosol | 82.11 | 89.72 |
| Bra033655.1-P | Field mustard | cytosol | 81.88 | 89.47 |
| CDX71534 | Canola | cytosol | 81.88 | 89.47 |
| CDY22373 | Canola | cytosol | 81.65 | 89.22 |
| Bra035338.1-P | Field mustard | cytosol | 81.19 | 88.72 |
| CDY02428 | Canola | cytosol, extracellular | 81.19 | 88.72 |
| CDY25226 | Canola | cytosol | 81.19 | 88.72 |
| GSMUA_Achr7P17620_001 | Banana | cytosol | 83.03 | 88.29 |
| Solyc10g054040.1.1 | Tomato | cytosol, unclear | 75.92 | 82.96 |
| HORVU7Hr1G119300.13 | Barley | cytosol | 71.33 | 77.36 |
| CDY20370 | Canola | cytosol | 41.28 | 66.91 |
| KRH51488 | Soybean | mitochondrion | 62.16 | 64.07 |
| CDY39032 | Canola | cytosol | 35.09 | 60.96 |
| KRH00031 | Soybean | plastid | 46.1 | 58.26 |
| CDY39033 | Canola | cytosol | 54.13 | 58.13 |
| CDY20371 | Canola | cytosol, plastid | 54.59 | 54.09 |
| HORVU3Hr1G067470.2 | Barley | cytosol | 25.92 | 49.78 |
| HORVU2Hr1G107280.1 | Barley | cytosol | 35.78 | 42.16 |
| HORVU6Hr1G087650.1 | Barley | cytosol, plasma membrane | 36.24 | 41.15 |
| HORVU7Hr1G084550.2 | Barley | cytosol | 39.22 | 40.43 |
| HORVU2Hr1G014000.1 | Barley | cytosol | 37.39 | 39.76 |
| HORVU6Hr1G083150.1 | Barley | cytosol | 37.84 | 38.73 |
| Bra008198.1-P | Field mustard | cytosol | 55.5 | 38.53 |
| HORVU7Hr1G032070.1 | Barley | cytosol | 38.53 | 37.84 |
| HORVU6Hr1G036990.7 | Barley | cytosol | 39.68 | 37.45 |
| HORVU2Hr1G014770.2 | Barley | cytosol, plastid | 37.61 | 37.19 |
| HORVU4Hr1G055060.1 | Barley | cytosol | 37.84 | 36.67 |
| HORVU6Hr1G049800.1 | Barley | cytosol | 4.36 | 33.93 |
| HORVU3Hr1G095530.3 | Barley | mitochondrion, plastid | 15.14 | 26.29 |
| HORVU1Hr1G091080.1 | Barley | mitochondrion, plastid | 14.91 | 25.9 |
| HORVU0Hr1G038060.2 | Barley | cytosol | 28.67 | 23.63 |
| HORVU2Hr1G086170.2 | Barley | cytosol | 27.98 | 21.44 |
| HORVU0Hr1G013350.2 | Barley | cytosol | 12.39 | 17.53 |
| HORVU0Hr1G006340.1 | Barley | cytosol | 30.96 | 17.13 |
| HORVU4Hr1G072010.4 | Barley | cytosol | 31.42 | 16.81 |
| HORVU3Hr1G029450.1 | Barley | cytosol | 30.96 | 16.71 |
| HORVU4Hr1G071960.2 | Barley | cytosol | 31.19 | 16.65 |
| HORVU1Hr1G060370.1 | Barley | cytosol | 30.73 | 16.6 |
| HORVU3Hr1G029440.1 | Barley | cytosol | 30.96 | 16.58 |
| HORVU1Hr1G060340.2 | Barley | cytosol | 30.73 | 16.48 |
| HORVU1Hr1G049910.1 | Barley | cytosol | 30.73 | 16.46 |
| HORVU2Hr1G011690.1 | Barley | cytosol | 28.9 | 15.29 |
| HORVU7Hr1G002880.2 | Barley | plastid | 27.06 | 14.73 |
| HORVU5Hr1G069560.1 | Barley | cytosol | 6.19 | 12.74 |
| HORVU1Hr1G015310.16 | Barley | cytosol, plastid | 28.21 | 12.24 |
| HORVU2Hr1G104530.9 | Barley | cytosol | 25.23 | 12.05 |
| HORVU4Hr1G016200.10 | Barley | cytosol, plastid | 27.29 | 11.83 |
| HORVU6Hr1G053620.1 | Barley | cytosol | 8.49 | 10.31 |
| HORVU7Hr1G058410.7 | Barley | cytosol, peroxisome | 24.08 | 9.49 |
| HORVU3Hr1G029660.1 | Barley | cytosol, peroxisome | 0.69 | 8.82 |
| HORVU5Hr1G078590.8 | Barley | plastid | 22.25 | 8.58 |
Protein Annotations
| Gene3D:1.10.8.60 | MapMan:19.2.6.2.1.4 | Gene3D:2.40.50.140 | InterPro:26S_Psome_P45-like | Gene3D:3.40.50.300 | UniProt:A0A287XA16 |
| InterPro:AAA+_ATPase | InterPro:ATPase_AAA_CS | InterPro:ATPase_AAA_core | ncoils:Coil | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016787 |
| GO:GO:0019538 | GO:GO:0030163 | GO:GO:0036402 | GO:GO:1901800 | EnsemblPlantsGene:HORVU7Hr1G090380 | EnsemblPlants:HORVU7Hr1G090380.3 |
| InterPro:P-loop_NTPase | PFAM:PF00004 | ScanProsite:PS00674 | InterPro:PSMC6 | PANTHER:PTHR23073 | PANTHER:PTHR23073:SF59 |
| SMART:SM00382 | SUPFAM:SSF52540 | TIGRFAMs:TIGR01242 | UniParc:UPI000B4627FE | SEG:seg | : |
Description
No Description!
Coordinates
chrchr7H:+:550853703..550858384
Molecular Weight (calculated)
48639.6 Da
IEP (calculated)
7.589
GRAVY (calculated)
-0.450
Length
436 amino acids
Sequence
(BLAST)
(BLAST)
001: KNQDTADGER QVPPAPLILG RKQSKAEPSR AAEEDMAEAD DAAAARRRTV ITEYRNKLLN ARELETRVRT GRENLKKAKK DYDKTEDDLK SLQSVGQIIG
101: EVLRPLDSER FIVKASSGPR YVVGCRSKVD KEKLTAATRV VLDMTTLTIM RTLPREVDPV VYNMLHEDPG NVSYSAVGGL SDQIRELRES IELPLMNPEL
201: FLRVGIKPPK KGVLLYGPPG TGKTLLARAI ASNIDANFLK IVSSAIIDKY IGESARLIRE MFNYAREHQP CIIFMDEIDA IGGRRFSEGT SADREIQRTL
301: MELLNQLDGF DELGKVKMIM ATNRPDVLDP ALLRPGRLDR KIEIPLPNEQ SRTEVLKIHA AGIAKHGEID YEAVVKLAEG FNGADLRNVC TEAGMAAIRA
401: ERDYVIHEDF MKAVRKLNDA KKLESSAHYS ADFGKD
101: EVLRPLDSER FIVKASSGPR YVVGCRSKVD KEKLTAATRV VLDMTTLTIM RTLPREVDPV VYNMLHEDPG NVSYSAVGGL SDQIRELRES IELPLMNPEL
201: FLRVGIKPPK KGVLLYGPPG TGKTLLARAI ASNIDANFLK IVSSAIIDKY IGESARLIRE MFNYAREHQP CIIFMDEIDA IGGRRFSEGT SADREIQRTL
301: MELLNQLDGF DELGKVKMIM ATNRPDVLDP ALLRPGRLDR KIEIPLPNEQ SRTEVLKIHA AGIAKHGEID YEAVVKLAEG FNGADLRNVC TEAGMAAIRA
401: ERDYVIHEDF MKAVRKLNDA KKLESSAHYS ADFGKD
001: MSDGDDAARR RTAAVTDYRK KLLHHKELES RVRTARENLR AAKKEFNKTE DDLKSLQSVG QIIGEVLRPL DNERLIVKAS SGPRYVVGCR SKVDKEKLTS
101: GTRVVLDMTT LTIMRALPRE VDPVVYNMLH EDPGNISYSA VGGLGDQIRE LRESIELPLM NPELFLRVGI KPPKGVLLYG PPGTGKTLLA RAIASNIDAN
201: FLKVVSSAII DKYIGESARL IREMFNYARE HQPCIIFMDE IDAIGGRRFS EGTSADREIQ RTLMELLNQL DGFDQLGKVK MIMATNRPDV LDPALLRPGR
301: LDRKIEIPLP NEQSRMEILK IHASGIAKHG EIDYEAIVKL GEGFNGADLR NICTEAGMFA IRAERDYVIH EDFMKAVRKL SEAKKLESSS HYNADFGKE
101: GTRVVLDMTT LTIMRALPRE VDPVVYNMLH EDPGNISYSA VGGLGDQIRE LRESIELPLM NPELFLRVGI KPPKGVLLYG PPGTGKTLLA RAIASNIDAN
201: FLKVVSSAII DKYIGESARL IREMFNYARE HQPCIIFMDE IDAIGGRRFS EGTSADREIQ RTLMELLNQL DGFDQLGKVK MIMATNRPDV LDPALLRPGR
301: LDRKIEIPLP NEQSRMEILK IHASGIAKHG EIDYEAIVKL GEGFNGADLR NICTEAGMFA IRAERDYVIH EDFMKAVRKL SEAKKLESSS HYNADFGKE
Arabidopsis Description
RPT4B26S protease regulatory subunit S10B homolog B [Source:UniProtKB/Swiss-Prot;Acc:Q9MAK9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.