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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 3
  • mitochondrion 1
  • cytoskeleton 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol
BaCelLo:cytosol
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytoskeleton
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY39032 Canola cytosol 72.49 77.69
CDY39033 Canola cytosol 89.96 59.61
CDY20371 Canola cytosol, plastid 91.08 55.68
TraesCS6D01G149500.1 Wheat cytosol 66.91 50.0
VIT_18s0001g13090.t01 Wine grape cytosol 66.91 45.23
GSMUA_AchrUn_... Banana cytosol 67.29 45.14
TraesCS7B01G280400.1 Wheat cytosol, unclear 66.91 45.0
EES06471 Sorghum cytosol 66.91 45.0
TraesCS6A01G162700.2 Wheat cytosol, golgi 66.91 45.0
TraesCS7A01G378600.1 Wheat cytosol 66.91 45.0
TraesCS7D01G375500.1 Wheat cytosol 66.91 45.0
Zm00001d015788_P001 Maize plasma membrane 66.91 45.0
Zm00001d053649_P002 Maize cytosol, mitochondrion 66.91 45.0
Os06t0607800-01 Rice nucleus 66.91 44.89
TraesCS6B01G188500.1 Wheat cytosol 66.54 44.75
Os02t0199900-01 Rice nucleus, plasma membrane 66.54 44.75
Zm00001d046539_P002 Maize cytosol, mitochondrion 66.17 44.72
GSMUA_Achr4P03720_001 Banana cytosol 65.8 44.47
EER88627 Sorghum cytosol 65.43 44.22
CDY02428 Canola cytosol, extracellular 65.43 44.11
CDY25226 Canola cytosol 65.43 44.11
CDY22373 Canola cytosol 65.43 44.11
CDX71534 Canola cytosol 65.43 44.11
GSMUA_Achr7P17620_001 Banana cytosol 66.91 43.9
HORVU6Hr1G032570.5 Barley cytosol 63.94 42.05
TraesCS7A01G545700.1 Wheat cytosol 61.71 41.71
TraesCS7B01G468900.1 Wheat cytosol 61.34 41.46
TraesCS7D01G532000.1 Wheat cytosol 61.34 41.46
HORVU7Hr1G090380.3 Barley cytosol 66.91 41.28
HORVU7Hr1G119300.13 Barley cytosol 61.34 41.04
CDY25624 Canola cytosol 33.83 36.26
CDX70903 Canola cytosol 47.58 30.77
CDY35832 Canola cytosol 47.58 30.55
CDX74842 Canola cytosol 45.35 29.61
CDY08201 Canola cytosol 39.03 29.58
CDY20470 Canola cytosol, plasma membrane 46.47 29.34
CDY24076 Canola cytosol 46.1 29.11
CDY25685 Canola cytosol 46.1 29.11
CDY36602 Canola cytosol 46.1 29.11
CDY30665 Canola cytosol 46.1 29.11
CDY02494 Canola cytosol 46.1 29.11
CDY06847 Canola cytosol 46.47 28.22
CDX92914 Canola cytosol, extracellular 46.1 27.99
CDY35245 Canola cytosol 46.1 27.99
CDX97472 Canola cytosol 46.1 27.87
CDY14224 Canola cytosol 46.1 27.87
CDY59958 Canola cytosol 37.55 27.75
CDX74142 Canola cytosol 43.49 27.59
CDY05176 Canola cytosol 43.49 27.59
CDY27761 Canola cytosol 43.49 27.59
CDY18782 Canola cytosol 43.49 27.59
CDY18801 Canola cytosol 43.49 27.59
CDY40714 Canola cytosol 43.49 27.59
CDY02806 Canola cytosol 40.89 27.23
CDY32714 Canola cytosol 40.89 27.23
CDY32995 Canola cytosol, extracellular 40.89 27.23
CDX88666 Canola cytosol 40.89 27.23
CDY58566 Canola cytosol 40.89 27.23
CDY43865 Canola cytosol 40.89 27.23
CDY30663 Canola cytosol 42.01 26.16
CDX88865 Canola cytosol, extracellular 47.21 20.19
CDY44958 Canola cytosol, plasma membrane 47.96 17.89
CDY42324 Canola cytosol, extracellular 47.58 17.85
CDX74308 Canola mitochondrion 37.17 14.16
CDY04161 Canola cytosol 31.6 14.1
CDY23949 Canola cytosol 36.06 13.38
CDX84794 Canola cytosol 36.43 13.19
CDX91939 Canola cytosol, mitochondrion 37.17 12.87
CDX89923 Canola cytosol 36.06 12.7
CDY45794 Canola nucleus 37.55 12.67
CDY11249 Canola cytosol 37.55 12.66
CDY54618 Canola cytosol 37.92 12.62
CDY41581 Canola cytosol 37.92 12.62
CDY07941 Canola cytosol 37.92 12.61
CDX80862 Canola cytosol, plastid 37.92 12.61
CDX73996 Canola cytosol 37.92 12.61
CDY22207 Canola cytosol 37.92 12.59
CDY41316 Canola cytosol, extracellular 37.92 12.59
CDY13308 Canola cytosol 37.92 12.59
CDY33111 Canola endoplasmic reticulum, plasma membrane, vacuole 32.34 12.15
CDX67563 Canola cytosol 37.92 11.6
CDX89698 Canola endoplasmic reticulum 29.74 11.51
CDY37450 Canola mitochondrion 37.55 10.92
CDY32490 Canola mitochondrion 37.55 10.9
CDX73571 Canola cytosol 28.62 10.36
CDX78154 Canola cytosol 28.62 10.35
CDX72118 Canola plastid 36.06 10.28
CDY56774 Canola plastid 36.8 9.72
CDX69950 Canola cytosol 33.46 8.24
CDY62119 Canola cytosol 32.71 8.06
CDY02982 Canola cytosol 31.97 7.29
CDY18139 Canola extracellular, vacuole 2.97 2.64
CDY69655 Canola cytosol, nucleus 0.37 0.44
Protein Annotations
Gene3D:1.10.8.60Gene3D:3.40.50.300MapMan:35.1GO:A0A078G1D8UniProt:A0A078G1D8InterPro:AAA+_ATPase
InterPro:ATPase_AAA_CSInterPro:ATPase_AAA_coreEnsemblPlants:CDY20370ProteinID:CDY20370ProteinID:CDY20370.1GO:GO:0000166
GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005524GO:GO:0008150GO:GO:0008152
GO:GO:0009056GO:GO:0009987GO:GO:0016787GO:GO:0019538GO:GO:0036402GO:GO:1901800
EnsemblPlantsGene:GSBRNA2T00012387001InterPro:P-loop_NTPasePFAM:PF00004ScanProsite:PS00674InterPro:PSMC6PANTHER:PTHR23073
PANTHER:PTHR23073:SF59SMART:SM00382SUPFAM:SSF52540UniParc:UPI0004EECBE1::
Description
BnaC02g24460DBnaC02g24460D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G1D8]
Coordinates
chrLK032107:+:119420..120676
Molecular Weight (calculated)
30013.2 Da
IEP (calculated)
5.987
GRAVY (calculated)
-0.259
Length
269 amino acids
Sequence
(BLAST)
001: MVCQHHGGDV SYSDLGGLTH QLRDVRDWIE RPLIDPDIFE RVGVKPPKGV LLYGPPGTGK TLLAKAISSN INSTFLIKSF SLVSKYVGES PLMVREMFKY
101: APEHQPCIIF LDEIDAIDRR RSCYGEGETK ECDRVLIELL SELDGFNELD KVKVIMATNR PDVLDPALLR PGRIDKKIEF SLPNEDSRIR ILKIHASGIT
201: KQGDIDYEKV VKLSEGFNGA DMRNVCTEAG MLALRAGHDY VVPSDFIKAV TKLGEAKKLE SSAQYNADF
Best Arabidopsis Sequence Match ( AT1G45000.1 )
(BLAST)
001: MSDGDDAARR RTAAVTDYRK KLLHHKELES RVRTARENLR AAKKEFNKTE DDLKSLQSVG QIIGEVLRPL DNERLIVKAS SGPRYVVGCR SKVDKEKLTS
101: GTRVVLDMTT LTIMRALPRE VDPVVYNMLH EDPGNISYSA VGGLGDQIRE LRESIELPLM NPELFLRVGI KPPKGVLLYG PPGTGKTLLA RAIASNIDAN
201: FLKVVSSAII DKYIGESARL IREMFNYARE HQPCIIFMDE IDAIGGRRFS EGTSADREIQ RTLMELLNQL DGFDQLGKVK MIMATNRPDV LDPALLRPGR
301: LDRKIEIPLP NEQSRMEILK IHASGIAKHG EIDYEAIVKL GEGFNGADLR NICTEAGMFA IRAERDYVIH EDFMKAVRKL SEAKKLESSS HYNADFGKE
Arabidopsis Description
RPT4B26S protease regulatory subunit S10B homolog B [Source:UniProtKB/Swiss-Prot;Acc:Q9MAK9]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.