Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- peroxisome 1
- mitochondrion 1
- plastid 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY62119 | Canola | cytosol | 97.53 | 97.53 |
| AT5G08470.1 | Thale cress | cytosol | 88.37 | 85.4 |
| VIT_00s0125g00170.t01 | Wine grape | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 64.01 | 61.64 |
| KRH50491 | Soybean | cytosol | 59.07 | 57.08 |
| Solyc04g057960.2.1 | Tomato | endoplasmic reticulum, plasma membrane | 58.33 | 56.47 |
| GSMUA_Achr11P... | Banana | cytosol | 55.77 | 54.33 |
| HORVU0Hr1G013350.2 | Barley | cytosol | 15.29 | 54.22 |
| EES15200 | Sorghum | cytosol | 47.71 | 47.62 |
| TraesCS7B01G174800.1 | Wheat | cytosol | 44.78 | 47.48 |
| TraesCS7A01G277100.1 | Wheat | peroxisome | 46.89 | 46.97 |
| TraesCS7D01G277100.1 | Wheat | cytosol, peroxisome, plastid | 46.89 | 46.97 |
| HORVU7Hr1G058410.7 | Barley | cytosol, peroxisome | 47.07 | 46.43 |
| TraesCS5D01G306600.2 | Wheat | mitochondrion | 45.05 | 44.97 |
| TraesCS5B01G299200.1 | Wheat | mitochondrion | 44.96 | 44.88 |
| Zm00001d049974_P004 | Maize | peroxisome | 45.51 | 44.57 |
| TraesCS5A01G301500.1 | Wheat | mitochondrion | 43.31 | 43.96 |
| HORVU5Hr1G078590.8 | Barley | plastid | 44.41 | 42.92 |
| CDY25624 | Canola | cytosol | 9.07 | 39.44 |
| CDY20370 | Canola | cytosol | 8.24 | 33.46 |
| CDY39032 | Canola | cytosol | 7.23 | 31.47 |
| CDY25226 | Canola | cytosol | 10.62 | 29.07 |
| CDY02428 | Canola | cytosol, extracellular | 10.53 | 28.82 |
| CDX71534 | Canola | cytosol | 10.53 | 28.82 |
| CDY22373 | Canola | cytosol | 10.53 | 28.82 |
| CDY04161 | Canola | cytosol | 15.38 | 27.86 |
| CDY58566 | Canola | cytosol | 10.16 | 27.48 |
| CDX70903 | Canola | cytosol | 10.44 | 27.4 |
| CDY02806 | Canola | cytosol | 10.07 | 27.23 |
| CDY43865 | Canola | cytosol | 10.07 | 27.23 |
| CDX88666 | Canola | cytosol | 10.07 | 27.23 |
| CDY35832 | Canola | cytosol | 10.44 | 27.21 |
| CDY32714 | Canola | cytosol | 9.98 | 26.98 |
| CDY39033 | Canola | cytosol | 9.98 | 26.85 |
| CDY32995 | Canola | cytosol, extracellular | 9.89 | 26.73 |
| CDY11249 | Canola | cytosol | 19.14 | 26.19 |
| CDY06847 | Canola | cytosol | 10.44 | 25.73 |
| CDY07941 | Canola | cytosol | 19.05 | 25.71 |
| CDX73996 | Canola | cytosol | 19.05 | 25.71 |
| CDY13308 | Canola | cytosol | 19.05 | 25.68 |
| CDX74308 | Canola | mitochondrion | 16.58 | 25.64 |
| CDY54618 | Canola | cytosol | 18.96 | 25.62 |
| CDY41581 | Canola | cytosol | 18.96 | 25.62 |
| CDX80862 | Canola | cytosol, plastid | 18.96 | 25.59 |
| CDY22207 | Canola | cytosol | 18.96 | 25.56 |
| CDY41316 | Canola | cytosol, extracellular | 18.96 | 25.56 |
| CDX92914 | Canola | cytosol, extracellular | 10.35 | 25.51 |
| CDY35245 | Canola | cytosol | 10.35 | 25.51 |
| CDX97472 | Canola | cytosol | 10.35 | 25.39 |
| CDY14224 | Canola | cytosol | 10.35 | 25.39 |
| CDY30665 | Canola | cytosol | 9.8 | 25.12 |
| CDY20470 | Canola | cytosol, plasma membrane | 9.8 | 25.12 |
| CDY24076 | Canola | cytosol | 9.8 | 25.12 |
| CDY36602 | Canola | cytosol | 9.8 | 25.12 |
| CDY25685 | Canola | cytosol | 9.8 | 25.12 |
| CDY02494 | Canola | cytosol | 9.8 | 25.12 |
| CDX74842 | Canola | cytosol | 9.43 | 25.0 |
| CDY20371 | Canola | cytosol, plastid | 9.89 | 24.55 |
| CDY23949 | Canola | cytosol | 15.93 | 24.0 |
| CDX73571 | Canola | cytosol | 16.3 | 23.96 |
| CDX78154 | Canola | cytosol | 16.21 | 23.79 |
| CDY33111 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 15.57 | 23.74 |
| CDX91939 | Canola | cytosol, mitochondrion | 16.85 | 23.68 |
| CDY05176 | Canola | cytosol | 9.07 | 23.35 |
| CDX74142 | Canola | cytosol | 9.07 | 23.35 |
| CDY18782 | Canola | cytosol | 9.07 | 23.35 |
| CDY27761 | Canola | cytosol | 9.07 | 23.35 |
| CDY40714 | Canola | cytosol | 9.07 | 23.35 |
| CDY18801 | Canola | cytosol | 9.07 | 23.35 |
| CDX84794 | Canola | cytosol | 15.84 | 23.28 |
| CDX67563 | Canola | cytosol | 18.68 | 23.21 |
| CDY59958 | Canola | cytosol | 7.69 | 23.08 |
| CDY45794 | Canola | nucleus | 16.58 | 22.71 |
| CDX89923 | Canola | cytosol | 15.84 | 22.64 |
| CDY08201 | Canola | cytosol | 7.33 | 22.54 |
| CDY30663 | Canola | cytosol | 8.79 | 22.22 |
| CDX72118 | Canola | plastid | 18.77 | 21.72 |
| CDY32490 | Canola | mitochondrion | 17.86 | 21.04 |
| CDY37450 | Canola | mitochondrion | 17.58 | 20.76 |
| CDY56774 | Canola | plastid | 18.96 | 20.33 |
| CDX89698 | Canola | endoplasmic reticulum | 12.91 | 20.29 |
| CDX88865 | Canola | cytosol, extracellular | 10.26 | 17.81 |
| CDY42324 | Canola | cytosol, extracellular | 10.44 | 15.9 |
| CDY44958 | Canola | cytosol, plasma membrane | 10.44 | 15.81 |
| CDY02982 | Canola | cytosol | 15.29 | 14.16 |
| CDY18139 | Canola | extracellular, vacuole | 3.85 | 13.86 |
| CDY69655 | Canola | cytosol, nucleus | 0.18 | 0.88 |
Protein Annotations
| Gene3D:1.10.8.60 | MapMan:23.4.1.5.1.1 | Gene3D:3.10.330.10 | Gene3D:3.40.50.300 | GO:A0A078BYY3 | InterPro:AAA+_ATPase |
| InterPro:ATPase_AAA_CS | InterPro:ATPase_AAA_core | InterPro:Asp_de-COase-like_dom_sf | InterPro:CDC48_domain_2-like_sf | EnsemblPlants:CDX69950 | ProteinID:CDX69950 |
| ProteinID:CDX69950.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005524 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005777 | GO:GO:0005778 |
| GO:GO:0006625 | GO:GO:0006810 | GO:GO:0007031 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016020 |
| GO:GO:0016043 | GO:GO:0016787 | GO:GO:0042623 | EnsemblPlantsGene:GSBRNA2T00136031001 | InterPro:P-loop_NTPase | InterPro:PEX-N_psi_beta-barrel |
| PFAM:PF00004 | PFAM:PF09262 | ScanProsite:PS00674 | PANTHER:PTHR23077 | PANTHER:PTHR23077:SF12 | InterPro:Pex1 |
| SMART:SM00382 | SUPFAM:SSF50692 | SUPFAM:SSF52540 | SUPFAM:SSF54585 | UniParc:UPI0004EDC90F | SEG:seg |
Description
BnaA10g22990D
Coordinates
chrLK031790:-:2448293..2455123
Molecular Weight (calculated)
119487.0 Da
IEP (calculated)
6.362
GRAVY (calculated)
-0.092
Length
1092 amino acids
Sequence
(BLAST)
(BLAST)
0001: METEAVVRTV AGVDCFVSLP RQILHVLQST SSSLLPPLLP VELRSGDRRW PVAWSGSSSS SSAIEVARVF AESISLPDGT VVQVRVLSNV PKATLVTVEP
0101: ETEDDWEVLE LNAELAEAAI LSQVRILHEA MKFPLWLHDR TVIRFAVVST FPPKGVVQLV AGTEVAVAPK RRERNLNSKK GPDASNKDVK IMLRVQDTTR
0201: SAFHEADVKG FDVRVALTSV AYIHPETAEK YSLESLQMIS VSPRIPLKGS VKKDEALNKK NSDASKKEPR RAILRLVFSD LAAKGHLMMV ESLRLYLGAG
0301: LHSWVHLRGC NVNVNKEVPA LSLSPCIFKI SEKENVLDRG TDMLGNPNSN RRSSHPPSGL TTNVDVVDWS AHEKVVTALL SEGLQIEGEQ DNAYQLKNKK
0401: GLECLTRLWS SAQRDAIASV TGVDVSSLIL GRETLFHFEV GGKKDKIVPL EILYVMTVSD ESSLGDKFIA YELTLDRREK KDNVVHTEPM LEKMNLGEPI
0501: FFSSAKERHC NKGVSPDISS LAWMGSVVSD VIKRMTVLLS PTAGMWFSKF SIPSPGHILI YGPPGSGKTI LARAAAKYLE EQKDLLAHVI LVSCSALAME
0601: KVQHIRQTLS SVIAEGLEHA PSVIILDDLD SIISSSSDNE GTQASNAITM LTKFLTDVID DYGEYRNTSC GIGPLAFVAS VQSLEQIPQT LSSSGRFDFH
0701: VQLAAPATSE RGAILKHEIQ KRLLECSEDI LLELAAKCEG YDAYDLEILI DRAVHAAIGR HLPCESNVSK YTLVKEDFTR AMHEFVPVAM RDITKSASEG
0801: GRSGWEDVGG VTDVKNAIKE MIELPSRFPK IFAKSPLRLR SNVLLYGPPG CGKTHIVGAA AAACSLRFIS VKGPELLNKY IGASEQSVRD IFAKAAAAAP
0901: CILFFDEFDS IAPKRGHDNT GVTDRVVNQF LTELDGVEVL TGVFVFAATS RPDLLDPALL RPGRLDRLLM CDFPSPPERL EILTVLSRKL PMADDIDLDP
1001: IAAMTEGFSG ADLQALLSDA QLAAVHEFLS KEDRTEPGTT PMITDPLLKS IASKTKPSVS EAEKQKLYDI YSQFLDSRKS SREAKGKRAT LA
0101: ETEDDWEVLE LNAELAEAAI LSQVRILHEA MKFPLWLHDR TVIRFAVVST FPPKGVVQLV AGTEVAVAPK RRERNLNSKK GPDASNKDVK IMLRVQDTTR
0201: SAFHEADVKG FDVRVALTSV AYIHPETAEK YSLESLQMIS VSPRIPLKGS VKKDEALNKK NSDASKKEPR RAILRLVFSD LAAKGHLMMV ESLRLYLGAG
0301: LHSWVHLRGC NVNVNKEVPA LSLSPCIFKI SEKENVLDRG TDMLGNPNSN RRSSHPPSGL TTNVDVVDWS AHEKVVTALL SEGLQIEGEQ DNAYQLKNKK
0401: GLECLTRLWS SAQRDAIASV TGVDVSSLIL GRETLFHFEV GGKKDKIVPL EILYVMTVSD ESSLGDKFIA YELTLDRREK KDNVVHTEPM LEKMNLGEPI
0501: FFSSAKERHC NKGVSPDISS LAWMGSVVSD VIKRMTVLLS PTAGMWFSKF SIPSPGHILI YGPPGSGKTI LARAAAKYLE EQKDLLAHVI LVSCSALAME
0601: KVQHIRQTLS SVIAEGLEHA PSVIILDDLD SIISSSSDNE GTQASNAITM LTKFLTDVID DYGEYRNTSC GIGPLAFVAS VQSLEQIPQT LSSSGRFDFH
0701: VQLAAPATSE RGAILKHEIQ KRLLECSEDI LLELAAKCEG YDAYDLEILI DRAVHAAIGR HLPCESNVSK YTLVKEDFTR AMHEFVPVAM RDITKSASEG
0801: GRSGWEDVGG VTDVKNAIKE MIELPSRFPK IFAKSPLRLR SNVLLYGPPG CGKTHIVGAA AAACSLRFIS VKGPELLNKY IGASEQSVRD IFAKAAAAAP
0901: CILFFDEFDS IAPKRGHDNT GVTDRVVNQF LTELDGVEVL TGVFVFAATS RPDLLDPALL RPGRLDRLLM CDFPSPPERL EILTVLSRKL PMADDIDLDP
1001: IAAMTEGFSG ADLQALLSDA QLAAVHEFLS KEDRTEPGTT PMITDPLLKS IASKTKPSVS EAEKQKLYDI YSQFLDSRKS SREAKGKRAT LA
0001: MSRNRQIIIP DDVMETEAVV NTVAGVDCFV SLPRQLLHAL QSTSSSPLPP LLPVELRSGD RRWSVAWSGS SSSSSAIEIA RVFAESISLP DGTVVKVRVL
0101: PNVPKATLVT VEPETEDDWE VLELNAELAE AAILSQVRIL HETMKFPLWL HDRTVIRFSV VSTFPSKGVV QLVPGTEVAV APKRRDRNLK AKKSQEKECN
0201: NVKALLRVQE TDRSAFHEAD VKGFELRVAL TSIAYIHPET AKKHSLESLQ LISVSPRIPL KGSAKKDEAL NMKNSEASKV AENGTSSAKK EPRQAILRLV
0301: FSDLAAKGHL MMVESLRLYL GAGLHSWVYL RGCNVNEDKE IPALSLSPCV FKISENEKVL DKGTDRLGNN NSVRKSSHPP SGLSTYVDVV DWSVHDKVVT
0401: ALSSEGLHDE GNHDKNKKGL EYLTRLWSLA QLDAMASVTG VDVSSLIVGR ETFFHFEVRG LESYKSIDGQ PSVNDRWESG KKDKHTPLEI LYVMTVSDES
0501: LLGDKFAGYD LSLDRSEKSD NVVHIEPVLE KMNLGEPIYL KSAKETHCNK GVSPDISSLT WMGPIVSDVI KRMTVLLSPA AGMWFSKFKI PSPGHILIYG
0601: PPGSGKTILA RAAAKYFEEQ KDLLAHVILV SCSTLALEKV QHIHHVLSSV IAEGLEHAPS VIILDDLDSI ISSSSDTEGT QASVGVTMLT KFLTDVIDDY
0701: GEYRNSSCGI GPLAFVASVQ SLEQIPQTLS SSGRFDFHVQ LAAPATSERG AILKHEIQKR LLDCSEDILL NLAAKCEGYD AYDLEILVDR AVHAAIGRHL
0801: PLESNISKYN LVKEDFTRAM HDFVPVAMRD ITKSASEGGR LGWEDVGGVT DIKNAIKEMI ELPSKFPKIF AKSPLRLRSN VLLYGPPGCG KTHIVGAAAA
0901: ACSLRFISVK GPELLNKYIG ASEQAVRDIF SKAAAAAPCI LFFDEFDSIA PKRGHDNTGV TDRVVNQFLT ELDGVEVLTG VFVFAATSRP DLLDPALLRP
1001: GRLDRLLLCD FPSPPERLEI LTVLSRKLLM ADDIDLEPIA LMTEGFSGAD LQALLSDAQL AAVHEYLNRE DKPETGTTPI ITDPLLKSIA SKTKPSVSET
1101: EKQKLYDIYS QFLDSRKSSR EAKGKRATLA
0101: PNVPKATLVT VEPETEDDWE VLELNAELAE AAILSQVRIL HETMKFPLWL HDRTVIRFSV VSTFPSKGVV QLVPGTEVAV APKRRDRNLK AKKSQEKECN
0201: NVKALLRVQE TDRSAFHEAD VKGFELRVAL TSIAYIHPET AKKHSLESLQ LISVSPRIPL KGSAKKDEAL NMKNSEASKV AENGTSSAKK EPRQAILRLV
0301: FSDLAAKGHL MMVESLRLYL GAGLHSWVYL RGCNVNEDKE IPALSLSPCV FKISENEKVL DKGTDRLGNN NSVRKSSHPP SGLSTYVDVV DWSVHDKVVT
0401: ALSSEGLHDE GNHDKNKKGL EYLTRLWSLA QLDAMASVTG VDVSSLIVGR ETFFHFEVRG LESYKSIDGQ PSVNDRWESG KKDKHTPLEI LYVMTVSDES
0501: LLGDKFAGYD LSLDRSEKSD NVVHIEPVLE KMNLGEPIYL KSAKETHCNK GVSPDISSLT WMGPIVSDVI KRMTVLLSPA AGMWFSKFKI PSPGHILIYG
0601: PPGSGKTILA RAAAKYFEEQ KDLLAHVILV SCSTLALEKV QHIHHVLSSV IAEGLEHAPS VIILDDLDSI ISSSSDTEGT QASVGVTMLT KFLTDVIDDY
0701: GEYRNSSCGI GPLAFVASVQ SLEQIPQTLS SSGRFDFHVQ LAAPATSERG AILKHEIQKR LLDCSEDILL NLAAKCEGYD AYDLEILVDR AVHAAIGRHL
0801: PLESNISKYN LVKEDFTRAM HDFVPVAMRD ITKSASEGGR LGWEDVGGVT DIKNAIKEMI ELPSKFPKIF AKSPLRLRSN VLLYGPPGCG KTHIVGAAAA
0901: ACSLRFISVK GPELLNKYIG ASEQAVRDIF SKAAAAAPCI LFFDEFDSIA PKRGHDNTGV TDRVVNQFLT ELDGVEVLTG VFVFAATSRP DLLDPALLRP
1001: GRLDRLLLCD FPSPPERLEI LTVLSRKLLM ADDIDLEPIA LMTEGFSGAD LQALLSDAQL AAVHEYLNRE DKPETGTTPI ITDPLLKSIA SKTKPSVSET
1101: EKQKLYDIYS QFLDSRKSSR EAKGKRATLA
Arabidopsis Description
PEX1Peroxisome biogenesis protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FNP1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.