Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, extracellular, endoplasmic reticulum, vacuole, plastid, cytosol, plasma membrane, golgi
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 2
- peroxisome 1
- nucleus 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH50491 | Soybean | cytosol | 65.78 | 66.02 |
| Solyc04g057960.2.1 | Tomato | endoplasmic reticulum, plasma membrane | 64.73 | 65.07 |
| CDY62119 | Canola | cytosol | 61.73 | 64.1 |
| CDX69950 | Canola | cytosol | 61.64 | 64.01 |
| Bra009342.1-P | Field mustard | cytosol | 62.17 | 62.89 |
| AT5G08470.1 | Thale cress | cytosol | 61.73 | 61.95 |
| GSMUA_Achr11P... | Banana | cytosol | 60.41 | 61.11 |
| HORVU0Hr1G013350.2 | Barley | cytosol | 15.17 | 55.84 |
| EES15200 | Sorghum | cytosol | 50.62 | 52.47 |
| TraesCS7B01G174800.1 | Wheat | cytosol | 46.65 | 51.36 |
| TraesCS7D01G277100.1 | Wheat | cytosol, peroxisome, plastid | 49.12 | 51.1 |
| TraesCS7A01G277100.1 | Wheat | peroxisome | 48.68 | 50.64 |
| HORVU7Hr1G058410.7 | Barley | cytosol, peroxisome | 49.29 | 50.5 |
| Zm00001d049974_P004 | Maize | peroxisome | 48.06 | 48.88 |
| TraesCS5D01G306600.2 | Wheat | mitochondrion | 46.38 | 48.08 |
| TraesCS5B01G299200.1 | Wheat | mitochondrion | 45.94 | 47.62 |
| TraesCS5A01G301500.1 | Wheat | mitochondrion | 45.06 | 47.49 |
| HORVU5Hr1G078590.8 | Barley | plastid | 45.5 | 45.66 |
| VIT_09s0002g05800.t01 | Wine grape | cytosol | 10.41 | 28.3 |
| VIT_18s0001g13090.t01 | Wine grape | cytosol | 9.79 | 27.89 |
| VIT_03s0038g04350.t01 | Wine grape | cytosol | 9.7 | 27.57 |
| VIT_04s0008g04690.t01 | Wine grape | cytosol | 10.14 | 27.38 |
| VIT_06s0061g00340.t01 | Wine grape | cytosol | 17.9 | 26.54 |
| VIT_08s0040g01480.t01 | Wine grape | cytosol | 18.69 | 26.3 |
| VIT_17s0000g08890.t01 | Wine grape | cytosol | 18.87 | 26.29 |
| VIT_06s0004g08220.t01 | Wine grape | cytosol | 9.52 | 25.84 |
| VIT_07s0005g05160.t01 | Wine grape | cytosol | 9.88 | 25.17 |
| VIT_14s0060g02260.t01 | Wine grape | cytosol | 8.91 | 24.94 |
| VIT_05s0020g01180.t01 | Wine grape | cytosol | 9.26 | 24.82 |
| VIT_11s0016g00230.t01 | Wine grape | cytosol | 9.26 | 24.71 |
| VIT_09s0002g00170.t01 | Wine grape | cytosol | 8.99 | 23.94 |
| VIT_01s0010g02600.t01 | Wine grape | cytosol | 17.2 | 23.64 |
| VIT_07s0104g01610.t01 | Wine grape | cytosol | 19.31 | 23.35 |
| VIT_08s0040g00910.t01 | Wine grape | cytosol | 17.99 | 19.26 |
Protein Annotations
| Gene3D:1.10.8.60 | EntrezGene:100259773 | wikigene:100259773 | MapMan:23.4.1.5.1.1 | Gene3D:3.10.330.10 | Gene3D:3.40.50.300 |
| InterPro:AAA+_ATPase | InterPro:ATPase_AAA_CS | InterPro:ATPase_AAA_core | InterPro:Asp_de-COase-like_dom_sf | ProteinID:CCB46496 | ProteinID:CCB46496.1 |
| InterPro:CDC48_domain_2-like_sf | UniProt:F6H2Q4 | EMBL:FN595230 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005777 | GO:GO:0005778 | GO:GO:0006625 | GO:GO:0006629 | GO:GO:0006635 | GO:GO:0006810 |
| GO:GO:0007031 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016020 |
| GO:GO:0016043 | GO:GO:0016558 | GO:GO:0016787 | GO:GO:0042623 | EntrezGene:LOC100259773 | wikigene:LOC100259773 |
| InterPro:P-loop_NTPase | InterPro:PEX-N_psi_beta-barrel | PFAM:PF00004 | PFAM:PF09262 | ScanProsite:PS00674 | PANTHER:PTHR23077 |
| PANTHER:PTHR23077:SF12 | InterPro:Pex1 | SMART:SM00382 | SUPFAM:SSF50692 | SUPFAM:SSF52540 | SUPFAM:SSF54585 |
| UniParc:UPI0001985C52 | ArrayExpress:VIT_00s0125g00170 | EnsemblPlantsGene:VIT_00s0125g00170 | EnsemblPlants:VIT_00s0125g00170.t01 | unigene:Vvi.18183 | RefSeq:XP_002273767 |
| RefSeq:XP_002273767.1 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chrUn:-:1516510..1583511
Molecular Weight (calculated)
124042.0 Da
IEP (calculated)
6.309
GRAVY (calculated)
-0.104
Length
1134 amino acids
Sequence
(BLAST)
(BLAST)
0001: MELAVRTVGG IESCFVSLPL PLIQTLQSTS SGLLPPVLAL ELRSSNNDVW VVAWSGSAST SSSIEVARQF AECISLPDHT AVQVRAVANL PKATLVTIEP
0101: HTEDDWEVLE LNAEHAEAAI LKQIGIVHEA MRFPLWLHGR TTITFLVVST FPKKAVVQLV PGTEVAVAPK RRKKYLDSHK NALVQSSNKD HPIAKALLRV
0201: QDSGQKLIHK SEVKGVELGV VLTNVVYIHP ETARNYSFDS LQLVILVPRS PSKGNYNDTD MFRKKSISTA KEFSDGLADK KEPCQVVVRL LISESVAKGH
0301: VMMAQSLRHY LRTGLHSWVY MKRCDINLKK EISLLSLSPC QFKMFEKNKA LEENGLEVLD SLTNHKTKSM LLETNSDTYM NISDWSTHEE FAAALSFESP
0401: GSEDEKTSSQ SGSRKGLQSL LQAWFLAHLD AINSNAGTEI DSLVVGNETL LHFNVTSDKF GTLGKFQASS NGSSKNRSSY GDLSVEILYI LAISEESQHS
0501: GKFNAYELSF PERNKRNNNL GNLELLVGNL RLGEPVSFYC MKERTSAKGF SLTASSLSWI GTAASDIINR LTTLLSPASG MWFSTYNLPL PGHVLIYGPP
0601: GSGKTLLART VAKALEEQED LLTHIVFVSC SQLALEKAVT IRQALSSYLS DALDHVPSLV IFDDLDLIIS SSSDLEGSQP STSVTALTEY LTDILDEYGE
0701: KRKNSCGIGP LAFIASAQSL ENVPQSLSSS GRFDFHVQLP APAATERMAI LKHEIQKRSL QCADDILSDV ASKCDGYDAY DLEILVDRTI HAAIGRFFPS
0801: NSAFDKSEKP TLVRDDFSQA MHEFLPVAMR DITKSASEGG RSGWEDVGGL VDIRNAIKEM IELPSKFPSI FAQSPLRLRS NVLLYGPPGC GKTHIVGAAA
0901: AACSLRFISV KGPELLNKYI GASEQAVRDI FLKASAASPC LLFFDEFDSI APKRGHDNTG VTDRVVNQFL TELDGVEVLT GVFVFAATSR PDLLDAALLR
1001: PGRLDRLLFC DFPSRRERLD ILTVLSRKLP LADDVAMDAI AYMTEGFSGA DLQALLSDAQ LAAVHEVLAT ADNKEPGKMP VITDALLKSV ASKARPSVSD
1101: AEKERLYTIY NQFLDSKKST AQSRDAKGKR ATLA
0101: HTEDDWEVLE LNAEHAEAAI LKQIGIVHEA MRFPLWLHGR TTITFLVVST FPKKAVVQLV PGTEVAVAPK RRKKYLDSHK NALVQSSNKD HPIAKALLRV
0201: QDSGQKLIHK SEVKGVELGV VLTNVVYIHP ETARNYSFDS LQLVILVPRS PSKGNYNDTD MFRKKSISTA KEFSDGLADK KEPCQVVVRL LISESVAKGH
0301: VMMAQSLRHY LRTGLHSWVY MKRCDINLKK EISLLSLSPC QFKMFEKNKA LEENGLEVLD SLTNHKTKSM LLETNSDTYM NISDWSTHEE FAAALSFESP
0401: GSEDEKTSSQ SGSRKGLQSL LQAWFLAHLD AINSNAGTEI DSLVVGNETL LHFNVTSDKF GTLGKFQASS NGSSKNRSSY GDLSVEILYI LAISEESQHS
0501: GKFNAYELSF PERNKRNNNL GNLELLVGNL RLGEPVSFYC MKERTSAKGF SLTASSLSWI GTAASDIINR LTTLLSPASG MWFSTYNLPL PGHVLIYGPP
0601: GSGKTLLART VAKALEEQED LLTHIVFVSC SQLALEKAVT IRQALSSYLS DALDHVPSLV IFDDLDLIIS SSSDLEGSQP STSVTALTEY LTDILDEYGE
0701: KRKNSCGIGP LAFIASAQSL ENVPQSLSSS GRFDFHVQLP APAATERMAI LKHEIQKRSL QCADDILSDV ASKCDGYDAY DLEILVDRTI HAAIGRFFPS
0801: NSAFDKSEKP TLVRDDFSQA MHEFLPVAMR DITKSASEGG RSGWEDVGGL VDIRNAIKEM IELPSKFPSI FAQSPLRLRS NVLLYGPPGC GKTHIVGAAA
0901: AACSLRFISV KGPELLNKYI GASEQAVRDI FLKASAASPC LLFFDEFDSI APKRGHDNTG VTDRVVNQFL TELDGVEVLT GVFVFAATSR PDLLDAALLR
1001: PGRLDRLLFC DFPSRRERLD ILTVLSRKLP LADDVAMDAI AYMTEGFSGA DLQALLSDAQ LAAVHEVLAT ADNKEPGKMP VITDALLKSV ASKARPSVSD
1101: AEKERLYTIY NQFLDSKKST AQSRDAKGKR ATLA
0001: MSRNRQIIIP DDVMETEAVV NTVAGVDCFV SLPRQLLHAL QSTSSSPLPP LLPVELRSGD RRWSVAWSGS SSSSSAIEIA RVFAESISLP DGTVVKVRVL
0101: PNVPKATLVT VEPETEDDWE VLELNAELAE AAILSQVRIL HETMKFPLWL HDRTVIRFSV VSTFPSKGVV QLVPGTEVAV APKRRDRNLK AKKSQEKECN
0201: NVKALLRVQE TDRSAFHEAD VKGFELRVAL TSIAYIHPET AKKHSLESLQ LISVSPRIPL KGSAKKDEAL NMKNSEASKV AENGTSSAKK EPRQAILRLV
0301: FSDLAAKGHL MMVESLRLYL GAGLHSWVYL RGCNVNEDKE IPALSLSPCV FKISENEKVL DKGTDRLGNN NSVRKSSHPP SGLSTYVDVV DWSVHDKVVT
0401: ALSSEGLHDE GNHDKNKKGL EYLTRLWSLA QLDAMASVTG VDVSSLIVGR ETFFHFEVRG LESYKSIDGQ PSVNDRWESG KKDKHTPLEI LYVMTVSDES
0501: LLGDKFAGYD LSLDRSEKSD NVVHIEPVLE KMNLGEPIYL KSAKETHCNK GVSPDISSLT WMGPIVSDVI KRMTVLLSPA AGMWFSKFKI PSPGHILIYG
0601: PPGSGKTILA RAAAKYFEEQ KDLLAHVILV SCSTLALEKV QHIHHVLSSV IAEGLEHAPS VIILDDLDSI ISSSSDTEGT QASVGVTMLT KFLTDVIDDY
0701: GEYRNSSCGI GPLAFVASVQ SLEQIPQTLS SSGRFDFHVQ LAAPATSERG AILKHEIQKR LLDCSEDILL NLAAKCEGYD AYDLEILVDR AVHAAIGRHL
0801: PLESNISKYN LVKEDFTRAM HDFVPVAMRD ITKSASEGGR LGWEDVGGVT DIKNAIKEMI ELPSKFPKIF AKSPLRLRSN VLLYGPPGCG KTHIVGAAAA
0901: ACSLRFISVK GPELLNKYIG ASEQAVRDIF SKAAAAAPCI LFFDEFDSIA PKRGHDNTGV TDRVVNQFLT ELDGVEVLTG VFVFAATSRP DLLDPALLRP
1001: GRLDRLLLCD FPSPPERLEI LTVLSRKLLM ADDIDLEPIA LMTEGFSGAD LQALLSDAQL AAVHEYLNRE DKPETGTTPI ITDPLLKSIA SKTKPSVSET
1101: EKQKLYDIYS QFLDSRKSSR EAKGKRATLA
0101: PNVPKATLVT VEPETEDDWE VLELNAELAE AAILSQVRIL HETMKFPLWL HDRTVIRFSV VSTFPSKGVV QLVPGTEVAV APKRRDRNLK AKKSQEKECN
0201: NVKALLRVQE TDRSAFHEAD VKGFELRVAL TSIAYIHPET AKKHSLESLQ LISVSPRIPL KGSAKKDEAL NMKNSEASKV AENGTSSAKK EPRQAILRLV
0301: FSDLAAKGHL MMVESLRLYL GAGLHSWVYL RGCNVNEDKE IPALSLSPCV FKISENEKVL DKGTDRLGNN NSVRKSSHPP SGLSTYVDVV DWSVHDKVVT
0401: ALSSEGLHDE GNHDKNKKGL EYLTRLWSLA QLDAMASVTG VDVSSLIVGR ETFFHFEVRG LESYKSIDGQ PSVNDRWESG KKDKHTPLEI LYVMTVSDES
0501: LLGDKFAGYD LSLDRSEKSD NVVHIEPVLE KMNLGEPIYL KSAKETHCNK GVSPDISSLT WMGPIVSDVI KRMTVLLSPA AGMWFSKFKI PSPGHILIYG
0601: PPGSGKTILA RAAAKYFEEQ KDLLAHVILV SCSTLALEKV QHIHHVLSSV IAEGLEHAPS VIILDDLDSI ISSSSDTEGT QASVGVTMLT KFLTDVIDDY
0701: GEYRNSSCGI GPLAFVASVQ SLEQIPQTLS SSGRFDFHVQ LAAPATSERG AILKHEIQKR LLDCSEDILL NLAAKCEGYD AYDLEILVDR AVHAAIGRHL
0801: PLESNISKYN LVKEDFTRAM HDFVPVAMRD ITKSASEGGR LGWEDVGGVT DIKNAIKEMI ELPSKFPKIF AKSPLRLRSN VLLYGPPGCG KTHIVGAAAA
0901: ACSLRFISVK GPELLNKYIG ASEQAVRDIF SKAAAAAPCI LFFDEFDSIA PKRGHDNTGV TDRVVNQFLT ELDGVEVLTG VFVFAATSRP DLLDPALLRP
1001: GRLDRLLLCD FPSPPERLEI LTVLSRKLLM ADDIDLEPIA LMTEGFSGAD LQALLSDAQL AAVHEYLNRE DKPETGTTPI ITDPLLKSIA SKTKPSVSET
1101: EKQKLYDIYS QFLDSRKSSR EAKGKRATLA
Arabidopsis Description
PEX1Peroxisome biogenesis protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FNP1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.