Factsheet for GSMUA_Achr11P18410_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
endoplasmic reticulum 2
peroxisome 1
mitochondrion 1
extracellular 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, peroxisome, secretory
BaCelLo:	nucleus
EpiLoc:	endoplasmic reticulum
MultiLoc:	peroxisome
Predotar:	secretory
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_00s0125g00170.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	61.11	60.41
Solyc04g057960.2.1	Tomato	endoplasmic reticulum, plasma membrane	57.27	56.91
KRH50491	Soybean	cytosol	57.18	56.73
HORVU0Hr1G013350.2	Barley	cytosol	15.43	56.17
EES15200	Sorghum	cytosol	54.5	55.85
CDX69950	Canola	cytosol	54.33	55.77
CDY62119	Canola	cytosol	54.33	55.77
TraesCS7B01G174800.1	Wheat	cytosol	50.49	54.95
Bra009342.1-P	Field mustard	cytosol	54.77	54.77
TraesCS7D01G277100.1	Wheat	cytosol, peroxisome, plastid	53.26	54.77
AT5G08470.1	Thale cress	cytosol	54.95	54.51
HORVU7Hr1G058410.7	Barley	cytosol, peroxisome	53.52	54.2
TraesCS7A01G277100.1	Wheat	peroxisome	52.45	53.95
Zm00001d049974_P004	Maize	peroxisome	51.92	52.2
TraesCS5B01G299200.1	Wheat	mitochondrion	50.85	52.1
TraesCS5D01G306600.2	Wheat	mitochondrion	50.4	51.65
TraesCS5A01G301500.1	Wheat	mitochondrion	49.15	51.21
HORVU5Hr1G078590.8	Barley	plastid	50.22	49.82
GSMUA_Achr5P13290_001	Banana	cytosol	6.07	30.91
GSMUA_Achr6P12250_001	Banana	cytosol	8.21	30.36
GSMUA_Achr11P...	Banana	cytosol	8.56	29.45
GSMUA_Achr7P09950_001	Banana	cytosol	10.35	28.78
GSMUA_AchrUn_...	Banana	cytosol	4.55	28.65
GSMUA_Achr6P11080_001	Banana	plastid	15.16	28.38
GSMUA_Achr10P...	Banana	cytosol	10.53	28.1
GSMUA_Achr3P00250_001	Banana	cytosol	4.91	28.06
GSMUA_Achr6P29120_001	Banana	cytosol	14.9	27.83
GSMUA_AchrUn_...	Banana	cytosol	9.9	27.68
GSMUA_Achr4P03720_001	Banana	cytosol	9.81	27.64
GSMUA_Achr4P05850_001	Banana	cytosol	10.44	27.59
GSMUA_Achr7P17620_001	Banana	cytosol	9.99	27.32
GSMUA_Achr4P05840_001	Banana	cytosol	10.26	27.32
GSMUA_Achr7P04540_001	Banana	cytosol	18.73	26.58
GSMUA_Achr5P15500_001	Banana	cytosol, plasma membrane	18.47	25.59
GSMUA_Achr4P26800_001	Banana	cytosol	18.29	25.34
GSMUA_Achr9P23550_001	Banana	mitochondrion	18.02	25.06
GSMUA_Achr5P04520_001	Banana	cytosol	8.92	24.69
GSMUA_Achr9P13230_001	Banana	cytosol	8.92	24.69
GSMUA_Achr4P03560_001	Banana	mitochondrion	17.04	24.42
GSMUA_Achr3P04570_001	Banana	cytosol	9.01	23.88
GSMUA_Achr8P16830_001	Banana	cytosol	9.01	23.76
GSMUA_AchrUn_...	Banana	cytosol	9.01	23.76
GSMUA_Achr7P21960_001	Banana	cytosol	9.63	22.31
GSMUA_Achr6P20030_001	Banana	cytosol	18.55	21.53
GSMUA_Achr3P00260_001	Banana	cytosol	8.65	19.88

Protein Annotations

Gene3D:1.10.8.60	MapMan:23.4.1.5.1.1	Gene3D:3.10.330.10	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ATPase_AAA_CS
InterPro:ATPase_AAA_core	InterPro:Asp_de-COase-like_dom_sf	InterPro:CDC48_domain_2-like_sf	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005777	GO:GO:0005778	GO:GO:0006625	GO:GO:0006629	GO:GO:0006635	GO:GO:0006810
GO:GO:0007031	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016020
GO:GO:0016043	GO:GO:0016558	GO:GO:0016787	GO:GO:0042623	EnsemblPlantsGene:GSMUA_Achr11G18410_001	EnsemblPlants:GSMUA_Achr11P18410_001
EnsemblPlants:GSMUA_Achr11T18410_001	UniProt:M0RTC1	InterPro:P-loop_NTPase	InterPro:PEX-N_psi_beta-barrel	PFAM:PF00004	PFAM:PF09262
ScanProsite:PS00674	PANTHER:PTHR23077	PANTHER:PTHR23077:SF12	InterPro:Pex1	SMART:SM00382	SUPFAM:SSF50692
SUPFAM:SSF52540	SUPFAM:SSF54585	UniParc:UPI000296E6B1	SEG:seg	:	:

Description

AAA-type ATPase family protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr11G18410_001]

Coordinates

chr11:+:19794266..19814675

Molecular Weight (calculated)

123689.0 Da

IEP (calculated)

6.465

GRAVY (calculated)

-0.152

Length

1121 amino acids

Sequence
(BLAST)

0001: MELEVRTVGG MESCFVSLPL FFIQTLEKTR GGFLPPVLAL ELRSRSGGDC WNLAWSGSSS RSTAIEVDQQ LAECISLPDH SKVQVKAIAN LPKADFVNIE
0101: PSGEDDWEIL ELNSEVAEEA ILKQVGIVYE GMKFPLWLHG HVMVEFLVAS TSPKKSVVQL VPGTEVSVAP KKRKNGVVAH KSAEKQNSTK EELRMKALLR
0201: VQAPNREYVH KFEFKDVELR VFLTSVAFIH PETAKKFSFE NLQVATVIPK LQQKEIMQNG NDIINAKRGN NGFLTASKMK PRHTVVHIVY SDSVGKGHVI
0301: LPQSLRYFIG SGVHSWVYIK NYLRSSKKDI RSMKISPCRF KSFGNGILES HTFLRHEGMP SNADIFRNGD MADWSHHEGP FSFLSHEALL RGDDDSVTFR
0401: TKLEKNLLIK LWVIGQINVV GSQSDQMKVN SVVLTNETLL HFEIVDHNKK KENIPSQGTL ERENGGAEYR VELLYLLGIN SNESSKGDLH DSFEFDISTI
0501: SKNNDDLHDL ELELGKLELG DPVSLDSISE NDFKRNFNIT LSSLSWLETS ISDVINRLLI LLSPNSGKLF YAYDLPSPGH VLIYGPPGSG KSTLMKAVAR
0601: HFEEHEEILA HIVYISCSKL ALEKSQTVRQ AISGYISEAL GSSPSIVIFD DLDNVISFSS DDEGYQPSSS ATALVNLFIN ILDEYGEKSR NSCGYGPVAF
0701: VASVQSLQNL PQSLCSSGRF DFHVQLSSPA VSERGAILKH EIEKRTLLCS EDVVSEIATK CDGYDAYDLE ILVDRAVHAA VSRFLPSSIT NRDTQPILLK
0801: EDFSVAMHEF IPVAMRGLTK AASEGGRSGW DDVGGLADIR NAIQEMIELP SKFPGIFAQS PLRLRSNVLL YGPPGCGKTH IVGAAAAACS LRFISVKGPE
0901: LLNKYIGASE QAVRDLFSKA AAAAPCLLFF DEFDSIAPKR GHDNTGVTDR VVNQLLTELD GVETLTGVFV FAATSRPDLL DAALLRPGRL DRLLYCDFPT
1001: WHERLVILKV LSRKLPLASN VNLETIASIT EGFSGADLQA LLSEAQLASV HELLDSGNSD NHAKTPVISN QLLMSVASKA RPSVSEDEKR RLLRIYSQFL
1101: TSKKSVSAQS RDAKGKRATL A

Best Arabidopsis Sequence Match ( AT5G08470.1 )
(BLAST)

0001: MSRNRQIIIP DDVMETEAVV NTVAGVDCFV SLPRQLLHAL QSTSSSPLPP LLPVELRSGD RRWSVAWSGS SSSSSAIEIA RVFAESISLP DGTVVKVRVL
0101: PNVPKATLVT VEPETEDDWE VLELNAELAE AAILSQVRIL HETMKFPLWL HDRTVIRFSV VSTFPSKGVV QLVPGTEVAV APKRRDRNLK AKKSQEKECN
0201: NVKALLRVQE TDRSAFHEAD VKGFELRVAL TSIAYIHPET AKKHSLESLQ LISVSPRIPL KGSAKKDEAL NMKNSEASKV AENGTSSAKK EPRQAILRLV
0301: FSDLAAKGHL MMVESLRLYL GAGLHSWVYL RGCNVNEDKE IPALSLSPCV FKISENEKVL DKGTDRLGNN NSVRKSSHPP SGLSTYVDVV DWSVHDKVVT
0401: ALSSEGLHDE GNHDKNKKGL EYLTRLWSLA QLDAMASVTG VDVSSLIVGR ETFFHFEVRG LESYKSIDGQ PSVNDRWESG KKDKHTPLEI LYVMTVSDES
0501: LLGDKFAGYD LSLDRSEKSD NVVHIEPVLE KMNLGEPIYL KSAKETHCNK GVSPDISSLT WMGPIVSDVI KRMTVLLSPA AGMWFSKFKI PSPGHILIYG
0601: PPGSGKTILA RAAAKYFEEQ KDLLAHVILV SCSTLALEKV QHIHHVLSSV IAEGLEHAPS VIILDDLDSI ISSSSDTEGT QASVGVTMLT KFLTDVIDDY
0701: GEYRNSSCGI GPLAFVASVQ SLEQIPQTLS SSGRFDFHVQ LAAPATSERG AILKHEIQKR LLDCSEDILL NLAAKCEGYD AYDLEILVDR AVHAAIGRHL
0801: PLESNISKYN LVKEDFTRAM HDFVPVAMRD ITKSASEGGR LGWEDVGGVT DIKNAIKEMI ELPSKFPKIF AKSPLRLRSN VLLYGPPGCG KTHIVGAAAA
0901: ACSLRFISVK GPELLNKYIG ASEQAVRDIF SKAAAAAPCI LFFDEFDSIA PKRGHDNTGV TDRVVNQFLT ELDGVEVLTG VFVFAATSRP DLLDPALLRP
1001: GRLDRLLLCD FPSPPERLEI LTVLSRKLLM ADDIDLEPIA LMTEGFSGAD LQALLSDAQL AAVHEYLNRE DKPETGTTPI ITDPLLKSIA SKTKPSVSET
1101: EKQKLYDIYS QFLDSRKSSR EAKGKRATLA

Arabidopsis Description

PEX1Peroxisome biogenesis protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FNP1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.