Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- nucleus 1
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
GSMUA_Achr9P13230_001 | Banana | cytosol | 86.29 | 90.12 |
GSMUA_Achr5P04520_001 | Banana | cytosol | 85.58 | 89.38 |
Solyc08g021990.1.1 | Tomato | cytosol, nucleus, plastid | 37.35 | 83.16 |
GSMUA_AchrUn_... | Banana | cytosol | 20.8 | 49.44 |
GSMUA_Achr6P12250_001 | Banana | cytosol | 32.15 | 44.88 |
GSMUA_Achr11P... | Banana | cytosol | 32.62 | 42.33 |
GSMUA_Achr7P09950_001 | Banana | cytosol | 39.48 | 41.44 |
GSMUA_AchrUn_... | Banana | cytosol | 38.77 | 40.9 |
GSMUA_AchrUn_... | Banana | cytosol | 40.19 | 40.0 |
GSMUA_Achr8P16830_001 | Banana | cytosol | 40.19 | 40.0 |
GSMUA_Achr10P... | Banana | cytosol | 39.72 | 40.0 |
GSMUA_Achr4P03720_001 | Banana | cytosol | 37.59 | 39.95 |
GSMUA_Achr7P17620_001 | Banana | cytosol | 38.53 | 39.76 |
GSMUA_Achr4P05840_001 | Banana | cytosol | 38.53 | 38.72 |
GSMUA_Achr4P05850_001 | Banana | cytosol | 38.53 | 38.44 |
GSMUA_Achr7P21960_001 | Banana | cytosol | 35.7 | 31.2 |
GSMUA_Achr5P13290_001 | Banana | cytosol | 11.58 | 22.27 |
GSMUA_Achr6P11080_001 | Banana | plastid | 29.08 | 20.53 |
GSMUA_Achr6P29120_001 | Banana | cytosol | 28.61 | 20.17 |
GSMUA_Achr3P00250_001 | Banana | cytosol | 8.98 | 19.39 |
GSMUA_Achr7P04540_001 | Banana | cytosol | 28.13 | 15.06 |
GSMUA_Achr4P26800_001 | Banana | cytosol | 28.13 | 14.71 |
GSMUA_Achr5P15500_001 | Banana | cytosol, plasma membrane | 27.9 | 14.59 |
GSMUA_Achr9P23550_001 | Banana | mitochondrion | 27.42 | 14.39 |
GSMUA_Achr4P03560_001 | Banana | mitochondrion | 25.53 | 13.81 |
GSMUA_Achr3P00260_001 | Banana | cytosol | 13.71 | 11.89 |
GSMUA_Achr6P20030_001 | Banana | cytosol | 25.3 | 11.08 |
GSMUA_Achr11P... | Banana | cytosol | 23.88 | 9.01 |
Protein Annotations
Gene3D:1.10.8.60 | MapMan:19.2.6.2.1.5 | Gene3D:2.40.50.140 | InterPro:26S_Psome_P45-like | Gene3D:3.40.50.300 | InterPro:AAA+_ATPase |
InterPro:ATPase_AAA_CS | InterPro:ATPase_AAA_core | ncoils:Coil | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0019538 |
GO:GO:0030163 | GO:GO:0036402 | GO:GO:1901800 | EnsemblPlantsGene:GSMUA_Achr3G04570_001 | EnsemblPlants:GSMUA_Achr3P04570_001 | EnsemblPlants:GSMUA_Achr3T04570_001 |
UniProt:M0SBS5 | InterPro:P-loop_NTPase | PFAM:PF00004 | ScanProsite:PS00674 | InterPro:PSMC3 | PANTHER:PTHR23073 |
PANTHER:PTHR23073:SF7 | SMART:SM00382 | SUPFAM:SSF52540 | TIGRFAMs:TIGR01242 | UniParc:UPI000295ECCE | SEG:seg |
Description
26S protease regulatory subunit 6A homolog [Source:GMGC_GENE;Acc:GSMUA_Achr3G04570_001]
Coordinates
chr3:-:2947237..2952107
Molecular Weight (calculated)
47514.4 Da
IEP (calculated)
4.690
GRAVY (calculated)
-0.331
Length
423 amino acids
Sequence
(BLAST)
(BLAST)
001: MESVMEEDLI LDDDLLSPMT TEDIIRASRL LDKEIRVLKD ELQRLNLELE SLKDKIKGNQ EKIKINKQLP YLVGNIVEIL EMNPEEEAEE DGADIDLNSQ
101: RKEKCVVLKT STRETIFLPV VRLVDPDKLK LGDLVGVNKD NYIILDTLPS EYDSQLKAME VDEKPTEDYN DIGGLEKQIQ ELVEAIVLPL MHKDRFQKLG
201: IRPPKGVLLY GPPGTGKTLM ARACAAQTKA TFLKLAGPQL VQKYIGEGAK LVRAAFQLAK DKSPCIIFID EIDAIGTKRF DSEVSGDREV QRTMLELVNQ
301: LDGFSSDECI KVIAATNRAD ILDPALMRSG RLDRKIEFTH PTEDARARIL QIHSRKMNVH PDVNFEELAR LTDGYNGAQL KAVCVEAGML ALLQDATEVT
401: HEDFNEGIIQ VQAKKKVGLN YYA
101: RKEKCVVLKT STRETIFLPV VRLVDPDKLK LGDLVGVNKD NYIILDTLPS EYDSQLKAME VDEKPTEDYN DIGGLEKQIQ ELVEAIVLPL MHKDRFQKLG
201: IRPPKGVLLY GPPGTGKTLM ARACAAQTKA TFLKLAGPQL VQKYIGEGAK LVRAAFQLAK DKSPCIIFID EIDAIGTKRF DSEVSGDREV QRTMLELVNQ
301: LDGFSSDECI KVIAATNRAD ILDPALMRSG RLDRKIEFTH PTEDARARIL QIHSRKMNVH PDVNFEELAR LTDGYNGAQL KAVCVEAGML ALLQDATEVT
401: HEDFNEGIIQ VQAKKKVGLN YYA
001: MATPMVEDTS SFEEDQLASM STEDITRATR LLDNEIRILK EDAQRTNLEC DSYKEKIKEN QEKIKLNKQL PYLVGNIVEI LEMNPEDDAE EDGANIDLDS
101: QRKGKCVVLK TSTRQTIFLP VVGLVDPDSL KPGDLVGVNK DSYLILDTLP SEYDSRVKAM EVDEKPTEDY NDIGGLEKQI QELVEAIVLP MTHKERFEKL
201: GVRPPKGVLL YGPPGTGKTL MARACAAQTN ATFLKLAGPQ LVQMFIGDGA KLVRDAFQLA KEKAPCIIFI DEIDAIGTKR FDSEVSGDRE VQRTMLELLN
301: QLDGFSSDER IKVIAATNRA DILDPALMRS GRLDRKIEFP HPTEEARARI LQIHSRKMNV HPDVNFEELA RSTDDFNGAQ LKAVCVEAGM LALRRDATEV
401: NHEDFNEGII QVQAKKKASL NYYA
101: QRKGKCVVLK TSTRQTIFLP VVGLVDPDSL KPGDLVGVNK DSYLILDTLP SEYDSRVKAM EVDEKPTEDY NDIGGLEKQI QELVEAIVLP MTHKERFEKL
201: GVRPPKGVLL YGPPGTGKTL MARACAAQTN ATFLKLAGPQ LVQMFIGDGA KLVRDAFQLA KEKAPCIIFI DEIDAIGTKR FDSEVSGDRE VQRTMLELLN
301: QLDGFSSDER IKVIAATNRA DILDPALMRS GRLDRKIEFP HPTEEARARI LQIHSRKMNV HPDVNFEELA RSTDDFNGAQ LKAVCVEAGM LALRRDATEV
401: NHEDFNEGII QVQAKKKASL NYYA
Arabidopsis Description
RPT5A26S proteasome regulatory subunit 6A homolog A [Source:UniProtKB/Swiss-Prot;Acc:Q9SEI2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.