Factsheet for GSMUA_Achr6P20030_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_07s0104g01610.t01	Wine grape	cytosol	60.04	61.83
KRG96401	Soybean	mitochondrion	57.76	60.72
KRH68139	Soybean	cytosol	41.93	60.45
Solyc06g008730.2.1	Tomato	cytosol	57.45	59.74
PGSC0003DMT400013679	Potato	cytosol	57.35	59.57
CDY37450	Canola	mitochondrion	56.31	58.81
CDX89923	Canola	cytosol	46.48	58.77
CDY32490	Canola	mitochondrion	56.31	58.68
AT1G03000.1	Thale cress	mitochondrion	57.14	58.66
EES12865	Sorghum	mitochondrion	55.38	57.65
TraesCS2D01G458300.3	Wheat	mitochondrion	54.87	56.81
TraesCS2A01G457600.3	Wheat	mitochondrion	54.76	56.7
TraesCS2B01G480000.3	Wheat	mitochondrion	54.24	56.16
Os04t0617600-01	Rice	cytosol	54.55	56.06
HORVU2Hr1G104530.9	Barley	cytosol	52.07	55.09
Zm00001d002462_P010	Maize	mitochondrion	53.93	49.01
GSMUA_Achr6P12250_001	Banana	cytosol	10.25	32.67
GSMUA_AchrUn_...	Banana	cytosol	6.0	32.58
GSMUA_Achr11P...	Banana	cytosol	10.35	30.67
GSMUA_Achr5P13290_001	Banana	cytosol	6.83	30.0
Bra032565.1-P	Field mustard	mitochondrion	56.11	29.08
GSMUA_Achr6P11080_001	Banana	plastid	17.6	28.38
GSMUA_Achr6P29120_001	Banana	cytosol	17.29	27.83
GSMUA_Achr5P15500_001	Banana	cytosol, plasma membrane	23.29	27.81
GSMUA_Achr7P04540_001	Banana	cytosol	22.67	27.72
GSMUA_Achr4P05850_001	Banana	cytosol	12.11	27.59
GSMUA_Achr4P26800_001	Banana	cytosol	23.08	27.56
GSMUA_AchrUn_...	Banana	cytosol	11.39	27.43
GSMUA_Achr4P03720_001	Banana	cytosol	11.28	27.39
GSMUA_Achr8P16830_001	Banana	cytosol	12.01	27.29
GSMUA_AchrUn_...	Banana	cytosol	12.01	27.29
GSMUA_Achr5P04520_001	Banana	cytosol	11.28	26.91
GSMUA_Achr9P23550_001	Banana	mitochondrion	22.36	26.8
GSMUA_Achr4P05840_001	Banana	cytosol	11.59	26.6
GSMUA_Achr7P17620_001	Banana	cytosol	11.18	26.34
GSMUA_Achr9P13230_001	Banana	cytosol	10.87	25.93
GSMUA_Achr7P09950_001	Banana	cytosol	10.77	25.81
GSMUA_Achr3P04570_001	Banana	cytosol	11.08	25.3
GSMUA_Achr10P...	Banana	cytosol	10.97	25.24
GSMUA_Achr3P00260_001	Banana	cytosol	12.53	24.8
GSMUA_Achr4P03560_001	Banana	mitochondrion	19.77	24.42
GSMUA_Achr3P00250_001	Banana	cytosol	4.87	23.98
GSMUA_Achr7P21960_001	Banana	cytosol	11.39	22.73
GSMUA_Achr11P...	Banana	cytosol	21.53	18.55

Protein Annotations

Gene3D:1.10.8.60	MapMan:23.4.1.5.1.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ATPase_AAA_CS	InterPro:ATPase_AAA_core
GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0006629	GO:GO:0006635	GO:GO:0006810	GO:GO:0008150	GO:GO:0008152
GO:GO:0009056	GO:GO:0009987	GO:GO:0016043	GO:GO:0016558	EnsemblPlantsGene:GSMUA_Achr6G20030_001	EnsemblPlants:GSMUA_Achr6P20030_001
EnsemblPlants:GSMUA_Achr6T20030_001	UniProt:M0T8K1	InterPro:P-loop_NTPase	PFAM:PF00004	ScanProsite:PS00674	PANTHER:PTHR23077
PANTHER:PTHR23077:SF9	SMART:SM00382	SUPFAM:SSF52540	UniParc:UPI0002951ADE	:	:

Description

AAA family ATPase, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr6G20030_001]

Coordinates

chr6:+:14439394..14447959

Molecular Weight (calculated)

105914.0 Da

IEP (calculated)

6.908

GRAVY (calculated)

-0.149

Length

966 amino acids

Sequence
(BLAST)

001: MSEIICNCFT VQNECFTGTI LSHYARRFCW RSVQSGMADR RKPLVLSSTR ALLDSVLGSA GSQGLRLPVG ILRFSDSGGV GSDELKENFF VVGLSASVLK
101: KLAIASGSLI LLKNSETNVG RIAKAKVLHH PLAGEKYRGC TQQATSVSSS QRVMKLLPSF TYPSEAYCPS DQEVAYVTPL LAFNLGLHIS CLKVLVRSGQ
201: ESLTSLFEVE EHGEEKETNY HPLFIDLIPW PDLPKYATHL RISFVKIPEC GLLGSLRGKS ATEEGDRQDM IDLALNEYFK VDKFLARGDV FYIRVDWNCS
301: SEMCVFCNQK SPKGLSSNIV YFKVMSMEPS DEPILCVNCN QTALVLGGSA ASSIPPDRFI GSSNDFTPLH VETVKKLTSI LAPAICPSAL LSRFRVSVFL
401: SGNPGCGKRT VVRYVAQCLG LHVVEYSCYD LTESSDKKAS AALTNAFKSA SRYSPCLLLL RHFDVFTNLS SNEGSRSDQV GITSEIASVI REFTEPLSEN
501: ENSYPGKMAN DASFLVEAEK LNSRVFLVAA AGSSDGLQPQ IRRCFSHEIS MSPLNEAQRI SMLSRSLRGS IRTLDKTIGD EFLKDIVSQT SGFMPRDIHA
601: LVADAGANFV QRTLTDGGKS ENGDFSEITA TGLASIQDED NSHDYANKHI EKEDFSKALE RSKKRNASAL GAPKVPNVKW EDVGGLEEVK KSILDTVQLP
701: LLHKDLFSSG LRKRSGVLLY GPPGTGKTLL AKAVATECSL NFLSVKGPEL INMYIGESEK NVRDIFQKAR AARPCVIFFD ELDSLAPARG ASGDSGGVMD
801: RVVSQMLAEI DGLNDSSQDL FIIGASNRPD LIDPALLRPG RFDKLLYVGV NTDASYRERL VLFCLTYSLT RKFKLDKNVS LFSVARKCPP NFTGADMYAL
901: CADAWFHAAK RKTSSDGSNP TIDDKADSVI VEINDFMKVL GDLAPSLSMD ELKKYERLRE QFEGPS

Best Arabidopsis Sequence Match ( AT1G03000.1 )
(BLAST)

001: MVERRNPLVL SSTRSTLRSV LNSSQPSSAD GDRVLNKDGD LLRGNARLSA GILRWRKDGE NVSDAKLDSL DDSALVGLST QLLKRLSINS GSLVVVKNIE
101: IGIQRVAQVV VLDPPKTTLE DASLTQVPVS DSLHTMLVFP TYDLMGQQLL DQEVAYLSPM LAFNLSLHIS CLKSLVHRGN GVLEKYFEAK CDEEFIGKSA
201: EDGSKIGLDL EPVSQVPGYA SHLRVSFVKI PECGTIPSLK VNSSFEAEER QGLIDSALQK YFGTDRQLSR GDIFRIYIDW NCGSSICNPC SQRLCSESDD
301: YIYFKVIAME PSNERFLRVN HSQTALVLGG TVSSGLPPDL LVYRSKVPMP LQEETVNILA SVLSPPLCPS ALASKLRVAV LLHGIPGCGK RTVVKYVARR
401: LGLHVVEFSC HSLLASSERK TSTALAQTFN MARRYSPTIL LLRHFDVFKN LGSQDGSLGD RVGVSFEIAS VIRELTEPVS NGDSSMEEKS NSNFSENEVG
501: KFRGHQVLLI ASAESTEGIS PTIRRCFSHE IRMGSLNDEQ RSEMLSQSLQ GVSQFLNISS DEFMKGLVGQ TSGFLPRDLQ ALVADAGANL YISQESETKK
601: INSLSDDLHG VDIHQASQID NSTEKLTAKE DFTKALDRSK KRNASALGAP KVPNVKWDDV GGLEDVKTSI LDTVQLPLLH KDLFSSGLRK RSGVLLYGPP
701: GTGKTLLAKA VATECSLNFL SVKGPELINM YIGESEKNVR DIFEKARSAR PCVIFFDELD SLAPARGASG DSGGVMDRVV SQMLAEIDGL SDSSQDLFII
801: GASNRPDLID PALLRPGRFD KLLYVGVNAD ASYRERVLKA LTRKFKLSED VSLYSVAKKC PSTFTGADMY ALCADAWFQA AKRKVSKSDS GDMPTEEDDP
901: DSVVVEYVDF IKAMDQLSPS LSITELKKYE MLRDQFQGRS S

Arabidopsis Description

PEX6Peroxisome biogenesis protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8RY16]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.