Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G458300.3 | Wheat | mitochondrion | 94.85 | 92.82 |
| TraesCS2A01G457600.3 | Wheat | mitochondrion | 94.63 | 92.6 |
| TraesCS2B01G480000.3 | Wheat | mitochondrion | 93.65 | 91.64 |
| EES12865 | Sorghum | mitochondrion | 79.19 | 77.91 |
| Os04t0617600-01 | Rice | cytosol | 79.3 | 77.02 |
| Zm00001d002462_P010 | Maize | mitochondrion | 76.34 | 65.57 |
| GSMUA_Achr6P20030_001 | Banana | cytosol | 55.09 | 52.07 |
| KRG96401 | Soybean | mitochondrion | 51.37 | 51.03 |
| KRH68139 | Soybean | cytosol | 37.35 | 50.9 |
| Solyc06g008730.2.1 | Tomato | cytosol | 50.38 | 49.52 |
| PGSC0003DMT400013679 | Potato | cytosol | 50.38 | 49.46 |
| CDX89923 | Canola | cytosol | 41.29 | 49.35 |
| VIT_07s0104g01610.t01 | Wine grape | cytosol | 49.95 | 48.61 |
| CDY32490 | Canola | mitochondrion | 49.18 | 48.44 |
| CDY37450 | Canola | mitochondrion | 49.07 | 48.43 |
| AT1G03000.1 | Thale cress | mitochondrion | 49.84 | 48.35 |
| HORVU3Hr1G067470.2 | Barley | cytosol | 8.54 | 34.36 |
| HORVU3Hr1G029660.1 | Barley | cytosol, peroxisome | 1.2 | 32.35 |
| HORVU6Hr1G049800.1 | Barley | cytosol | 1.97 | 32.14 |
| HORVU0Hr1G038060.2 | Barley | cytosol | 17.85 | 30.81 |
| HORVU0Hr1G013350.2 | Barley | cytosol | 10.3 | 30.52 |
| HORVU2Hr1G086170.2 | Barley | cytosol | 17.42 | 27.94 |
| HORVU6Hr1G087650.1 | Barley | cytosol, plasma membrane | 11.72 | 27.86 |
| HORVU2Hr1G107280.1 | Barley | cytosol | 11.28 | 27.84 |
| HORVU0Hr1G006340.1 | Barley | cytosol | 23.55 | 27.28 |
| HORVU7Hr1G119300.13 | Barley | cytosol | 11.94 | 27.11 |
| HORVU2Hr1G014000.1 | Barley | cytosol | 12.16 | 27.07 |
| HORVU7Hr1G084550.2 | Barley | cytosol | 12.38 | 26.71 |
| HORVU3Hr1G029450.1 | Barley | cytosol | 23.55 | 26.61 |
| HORVU6Hr1G083150.1 | Barley | cytosol | 12.38 | 26.53 |
| HORVU4Hr1G055060.1 | Barley | cytosol | 13.03 | 26.44 |
| HORVU3Hr1G029440.1 | Barley | cytosol | 23.55 | 26.41 |
| HORVU1Hr1G060370.1 | Barley | cytosol | 23.33 | 26.39 |
| HORVU1Hr1G060340.2 | Barley | cytosol | 23.33 | 26.2 |
| HORVU4Hr1G071960.2 | Barley | cytosol | 23.44 | 26.19 |
| HORVU4Hr1G072010.4 | Barley | cytosol | 23.33 | 26.14 |
| HORVU1Hr1G049910.1 | Barley | cytosol | 23.22 | 26.04 |
| HORVU6Hr1G032570.5 | Barley | cytosol | 11.61 | 25.92 |
| HORVU7Hr1G032070.1 | Barley | cytosol | 12.49 | 25.68 |
| HORVU2Hr1G011690.1 | Barley | cytosol | 23.0 | 25.49 |
| HORVU7Hr1G090380.3 | Barley | cytosol | 12.05 | 25.23 |
| Bra032565.1-P | Field mustard | mitochondrion | 50.6 | 24.79 |
| HORVU2Hr1G014770.2 | Barley | cytosol, plastid | 11.94 | 24.72 |
| HORVU6Hr1G036990.7 | Barley | cytosol | 12.27 | 24.24 |
| HORVU7Hr1G002880.2 | Barley | plastid | 19.82 | 22.6 |
| HORVU6Hr1G053620.1 | Barley | cytosol | 7.89 | 20.06 |
| HORVU5Hr1G069560.1 | Barley | cytosol | 4.6 | 19.81 |
| HORVU4Hr1G016200.10 | Barley | cytosol, plastid | 21.47 | 19.48 |
| HORVU1Hr1G015310.16 | Barley | cytosol, plastid | 21.25 | 19.3 |
| HORVU3Hr1G095530.3 | Barley | mitochondrion, plastid | 4.93 | 17.93 |
| HORVU1Hr1G091080.1 | Barley | mitochondrion, plastid | 4.82 | 17.53 |
| HORVU7Hr1G058410.7 | Barley | cytosol, peroxisome | 20.7 | 17.07 |
| HORVU5Hr1G078590.8 | Barley | plastid | 20.81 | 16.81 |
Protein Annotations
| Gene3D:1.10.8.60 | MapMan:23.4.1.5.1.2 | Gene3D:3.40.50.300 | UniProt:A0A287JA25 | InterPro:AAA+_ATPase | InterPro:ATPase_AAA_CS |
| InterPro:ATPase_AAA_core | ncoils:Coil | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005524 |
| GO:GO:0006629 | GO:GO:0006635 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 |
| GO:GO:0009987 | GO:GO:0016043 | GO:GO:0016558 | EnsemblPlantsGene:HORVU2Hr1G104530 | EnsemblPlants:HORVU2Hr1G104530.9 | InterPro:P-loop_NTPase |
| PFAM:PF00004 | ScanProsite:PS00674 | PANTHER:PTHR23077 | PANTHER:PTHR23077:SF9 | SMART:SM00382 | SUPFAM:SSF52540 |
| UniParc:UPI000B482504 | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr2H:-:703950407..703955335
Molecular Weight (calculated)
99547.8 Da
IEP (calculated)
6.221
GRAVY (calculated)
-0.136
Length
913 amino acids
Sequence
(BLAST)
(BLAST)
001: RFPARPSVPG CGGEFGELAS FVALPASALR RLAVVTGTAV LVKNTDNNVG RVVKAVVLDR PSLDESKREH PDSDPVASTS SSDRVMGSLP TRSFPANGFT
101: PLDEDVAYVS PLLAFNLGVH VSCLKLLIQK GEEPFKFCSK VFEDGSASSG TGISLHLELL PCPQVPKHAL HLRVSVVRIP DCGVLASLKI NSAIGGSDYQ
201: DMIDQALNEH FKFDRFLASG DVFSIHNDWN CGMISCLACN KENDRLHPPS MIYFKVTGME PSNEPILRIN RDQTALVLGG SASAPIPPCS FFSANDDSVP
301: LHGEVVEQLA SIIAPALCPS NILPRIKFST FLYGPSGCGK RTVVRHVANH LGMHVVECCC HDLMTSSESG ASAALVAAFK EAQKYSPSII LLRHFDAIGN
401: TSSNEGPQSE QSGVAANVES VIKQYTGQRW VVKDSLPARD VIGNSYLVEP ERVSSVQVIL VATADSAEGM QQSIRRCFRH EVNMKTINED QRKNLISETL
501: HGVSTVADES IDDKFVKDIS VQTSGFMPRD ILALVADAGV SFAHKVALEK SSNDELEDAL TASSSTTQKE ENQFCKEDIL SSLERAKKRN RAALGTPKVP
601: DVKWEDVGGL EEVKKVILDT IQLPLLYKHL FSSKLPKRSG VLLYGPPGTG KTLLAKAVAT ECSLNFLSVK GPELINMYVG ESEKNVRDIF EKARSARPCV
701: IFFDELDSLA PARGSSADSG GVMDRVVSQL LVEIDGLSDN SQDLFIIGAT NRPDLLDSAL LRPGRFDKLL YIGVNTEASY RERILKAQTR KYKLHENVSL
801: LSIAQHCPPN FTGADIYALC ADAWFHAAKR SVKTLEADPS RNNDAGAEEV IVETEDFMTV ILKSFVRKHS IKSLWSYLRS LTSSPITQVL GDISPSLSME
901: ELQNYEQLRQ KIE
101: PLDEDVAYVS PLLAFNLGVH VSCLKLLIQK GEEPFKFCSK VFEDGSASSG TGISLHLELL PCPQVPKHAL HLRVSVVRIP DCGVLASLKI NSAIGGSDYQ
201: DMIDQALNEH FKFDRFLASG DVFSIHNDWN CGMISCLACN KENDRLHPPS MIYFKVTGME PSNEPILRIN RDQTALVLGG SASAPIPPCS FFSANDDSVP
301: LHGEVVEQLA SIIAPALCPS NILPRIKFST FLYGPSGCGK RTVVRHVANH LGMHVVECCC HDLMTSSESG ASAALVAAFK EAQKYSPSII LLRHFDAIGN
401: TSSNEGPQSE QSGVAANVES VIKQYTGQRW VVKDSLPARD VIGNSYLVEP ERVSSVQVIL VATADSAEGM QQSIRRCFRH EVNMKTINED QRKNLISETL
501: HGVSTVADES IDDKFVKDIS VQTSGFMPRD ILALVADAGV SFAHKVALEK SSNDELEDAL TASSSTTQKE ENQFCKEDIL SSLERAKKRN RAALGTPKVP
601: DVKWEDVGGL EEVKKVILDT IQLPLLYKHL FSSKLPKRSG VLLYGPPGTG KTLLAKAVAT ECSLNFLSVK GPELINMYVG ESEKNVRDIF EKARSARPCV
701: IFFDELDSLA PARGSSADSG GVMDRVVSQL LVEIDGLSDN SQDLFIIGAT NRPDLLDSAL LRPGRFDKLL YIGVNTEASY RERILKAQTR KYKLHENVSL
801: LSIAQHCPPN FTGADIYALC ADAWFHAAKR SVKTLEADPS RNNDAGAEEV IVETEDFMTV ILKSFVRKHS IKSLWSYLRS LTSSPITQVL GDISPSLSME
901: ELQNYEQLRQ KIE
001: MVERRNPLVL SSTRSTLRSV LNSSQPSSAD GDRVLNKDGD LLRGNARLSA GILRWRKDGE NVSDAKLDSL DDSALVGLST QLLKRLSINS GSLVVVKNIE
101: IGIQRVAQVV VLDPPKTTLE DASLTQVPVS DSLHTMLVFP TYDLMGQQLL DQEVAYLSPM LAFNLSLHIS CLKSLVHRGN GVLEKYFEAK CDEEFIGKSA
201: EDGSKIGLDL EPVSQVPGYA SHLRVSFVKI PECGTIPSLK VNSSFEAEER QGLIDSALQK YFGTDRQLSR GDIFRIYIDW NCGSSICNPC SQRLCSESDD
301: YIYFKVIAME PSNERFLRVN HSQTALVLGG TVSSGLPPDL LVYRSKVPMP LQEETVNILA SVLSPPLCPS ALASKLRVAV LLHGIPGCGK RTVVKYVARR
401: LGLHVVEFSC HSLLASSERK TSTALAQTFN MARRYSPTIL LLRHFDVFKN LGSQDGSLGD RVGVSFEIAS VIRELTEPVS NGDSSMEEKS NSNFSENEVG
501: KFRGHQVLLI ASAESTEGIS PTIRRCFSHE IRMGSLNDEQ RSEMLSQSLQ GVSQFLNISS DEFMKGLVGQ TSGFLPRDLQ ALVADAGANL YISQESETKK
601: INSLSDDLHG VDIHQASQID NSTEKLTAKE DFTKALDRSK KRNASALGAP KVPNVKWDDV GGLEDVKTSI LDTVQLPLLH KDLFSSGLRK RSGVLLYGPP
701: GTGKTLLAKA VATECSLNFL SVKGPELINM YIGESEKNVR DIFEKARSAR PCVIFFDELD SLAPARGASG DSGGVMDRVV SQMLAEIDGL SDSSQDLFII
801: GASNRPDLID PALLRPGRFD KLLYVGVNAD ASYRERVLKA LTRKFKLSED VSLYSVAKKC PSTFTGADMY ALCADAWFQA AKRKVSKSDS GDMPTEEDDP
901: DSVVVEYVDF IKAMDQLSPS LSITELKKYE MLRDQFQGRS S
101: IGIQRVAQVV VLDPPKTTLE DASLTQVPVS DSLHTMLVFP TYDLMGQQLL DQEVAYLSPM LAFNLSLHIS CLKSLVHRGN GVLEKYFEAK CDEEFIGKSA
201: EDGSKIGLDL EPVSQVPGYA SHLRVSFVKI PECGTIPSLK VNSSFEAEER QGLIDSALQK YFGTDRQLSR GDIFRIYIDW NCGSSICNPC SQRLCSESDD
301: YIYFKVIAME PSNERFLRVN HSQTALVLGG TVSSGLPPDL LVYRSKVPMP LQEETVNILA SVLSPPLCPS ALASKLRVAV LLHGIPGCGK RTVVKYVARR
401: LGLHVVEFSC HSLLASSERK TSTALAQTFN MARRYSPTIL LLRHFDVFKN LGSQDGSLGD RVGVSFEIAS VIRELTEPVS NGDSSMEEKS NSNFSENEVG
501: KFRGHQVLLI ASAESTEGIS PTIRRCFSHE IRMGSLNDEQ RSEMLSQSLQ GVSQFLNISS DEFMKGLVGQ TSGFLPRDLQ ALVADAGANL YISQESETKK
601: INSLSDDLHG VDIHQASQID NSTEKLTAKE DFTKALDRSK KRNASALGAP KVPNVKWDDV GGLEDVKTSI LDTVQLPLLH KDLFSSGLRK RSGVLLYGPP
701: GTGKTLLAKA VATECSLNFL SVKGPELINM YIGESEKNVR DIFEKARSAR PCVIFFDELD SLAPARGASG DSGGVMDRVV SQMLAEIDGL SDSSQDLFII
801: GASNRPDLID PALLRPGRFD KLLYVGVNAD ASYRERVLKA LTRKFKLSED VSLYSVAKKC PSTFTGADMY ALCADAWFQA AKRKVSKSDS GDMPTEEDDP
901: DSVVVEYVDF IKAMDQLSPS LSITELKKYE MLRDQFQGRS S
Arabidopsis Description
PEX6Peroxisome biogenesis protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8RY16]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.