Factsheet for HORVU6Hr1G083150.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytoskeleton, cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytoskeleton
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G376500.1	Wheat	golgi	100.0	100.0
TraesCS6D01G326400.1	Wheat	cytosol	100.0	100.0
TraesCSU01G080700.1	Wheat	cytosol	100.0	100.0
GSMUA_AchrUn_...	Banana	cytosol	96.95	97.18
Bra005023.1-P	Field mustard	cytosol	54.46	97.07
GSMUA_Achr8P16830_001	Banana	cytosol	96.24	96.47
KRH69005	Soybean	nucleus	95.77	95.77
PGSC0003DMT400023656	Potato	cytosol	96.01	95.56
VIT_09s0002g00170.t01	Wine grape	cytosol	95.54	95.54
CDY30665	Canola	cytosol	95.54	95.54
Solyc03g123730.2.1	Tomato	nucleus	95.77	95.33
CDY24076	Canola	cytosol	95.31	95.31
CDY36602	Canola	cytosol	95.31	95.31
AT1G53750.1	Thale cress	cytosol	95.07	95.07
Bra039688.1-P	Field mustard	cytosol	95.07	95.07
PGSC0003DMT400012446	Potato	cytosol	95.31	94.64
CDY25685	Canola	cytosol	94.6	94.6
CDY02494	Canola	cytosol	94.6	94.6
Bra030922.1-P	Field mustard	cytosol	94.6	94.6
CDX74842	Canola	cytosol	90.61	93.69
CDY20470	Canola	cytosol, plasma membrane	93.43	93.43
HORVU7Hr1G032070.1	Barley	cytosol	96.48	92.57
Bra040569.1-P	Field mustard	cytosol	93.66	92.15
CDY08201	Canola	cytosol	74.18	89.01
CDY30663	Canola	cytosol	76.29	75.23
AT1G53780.2	Thale cress	cytosol	81.46	55.97
HORVU3Hr1G067470.2	Barley	cytosol	27.23	51.1
HORVU7Hr1G084550.2	Barley	cytosol	46.01	46.34
HORVU6Hr1G087650.1	Barley	cytosol, plasma membrane	38.26	42.45
HORVU6Hr1G036990.7	Barley	cytosol	45.31	41.77
HORVU2Hr1G107280.1	Barley	cytosol	34.98	40.27
HORVU6Hr1G032570.5	Barley	cytosol	38.26	39.85
HORVU7Hr1G119300.13	Barley	cytosol	37.56	39.8
HORVU2Hr1G014000.1	Barley	cytosol	36.62	38.05
HORVU7Hr1G090380.3	Barley	cytosol	38.73	37.84
HORVU4Hr1G055060.1	Barley	cytosol	38.5	36.44
HORVU2Hr1G014770.2	Barley	cytosol, plastid	37.32	36.05
HORVU6Hr1G049800.1	Barley	cytosol	4.46	33.93
HORVU0Hr1G038060.2	Barley	cytosol	29.58	23.82
HORVU1Hr1G091080.1	Barley	mitochondrion, plastid	13.38	22.71
HORVU3Hr1G095530.3	Barley	mitochondrion, plastid	13.38	22.71
HORVU2Hr1G086170.2	Barley	cytosol	28.64	21.44
HORVU0Hr1G006340.1	Barley	cytosol	32.63	17.64
HORVU3Hr1G029450.1	Barley	cytosol	32.63	17.2
HORVU4Hr1G072010.4	Barley	cytosol	32.86	17.18
HORVU3Hr1G029440.1	Barley	cytosol	32.63	17.08
HORVU4Hr1G071960.2	Barley	cytosol	32.63	17.01
HORVU1Hr1G060370.1	Barley	cytosol	31.92	16.85
HORVU1Hr1G049910.1	Barley	cytosol	32.16	16.83
HORVU1Hr1G060340.2	Barley	cytosol	31.92	16.73
HORVU0Hr1G013350.2	Barley	cytosol	11.74	16.23
HORVU2Hr1G011690.1	Barley	cytosol	31.22	16.14
HORVU7Hr1G002880.2	Barley	plastid	28.87	15.36
HORVU5Hr1G069560.1	Barley	cytosol	6.34	12.74
HORVU4Hr1G016200.10	Barley	cytosol, plastid	29.81	12.62
HORVU1Hr1G015310.16	Barley	cytosol, plastid	29.58	12.54
HORVU2Hr1G104530.9	Barley	cytosol	26.53	12.38
HORVU6Hr1G053620.1	Barley	cytosol	9.15	10.86
HORVU7Hr1G058410.7	Barley	cytosol, peroxisome	23.71	9.12
HORVU5Hr1G078590.8	Barley	plastid	22.77	8.58
HORVU3Hr1G029660.1	Barley	cytosol, peroxisome	0.47	5.88

Protein Annotations

Gene3D:1.10.8.60	MapMan:19.2.6.2.1.1	Gene3D:2.40.50.140	InterPro:26S_Psome_P45-like	Gene3D:3.40.50.300	UniProt:A0A287UY56
InterPro:AAA+_ATPase	InterPro:ATPase_AAA_CS	InterPro:ATPase_AAA_core	ncoils:Coil	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0016787	GO:GO:0019538
GO:GO:0030163	EnsemblPlantsGene:HORVU6Hr1G083150	EnsemblPlants:HORVU6Hr1G083150.1	InterPro:P-loop_NTPase	PFAM:PF00004	ScanProsite:PS00674
PANTHER:PTHR23073	PANTHER:PTHR23073:SF60	SMART:SM00382	SUPFAM:SSF52540	TIGRFAMs:TIGR01242	UniParc:UPI00016F1D71
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrchr6H:-:550495959..550500050

Molecular Weight (calculated)

47641.8 Da

IEP (calculated)

5.702

GRAVY (calculated)

-0.405

Length

426 amino acids

Sequence
(BLAST)

001: MAPEPEDDIM AEKNPRPLDE DDIALLKTYG LGPYSTSIKT AEKEIKELAK RINDLCGIKE SDTGLAPPSQ WDLVSDKQMM QEEQPLQVAR CTKIINPNTD
101: DAKYMINVKQ IAKFVVGLGD KVSPTDIEEG MRVGVDRNKY QIQIPLPPKI DPSVTMMTVE EKPDVTYNDV GGCKEQIEKM REVVELPMLH PEKFVKLGID
201: PPKGVLCYGP PGTGKTLLAR AVANRTDACF IRVIGSELVQ KYVGEGARMV RELFQMARSK KACIIFFDEV DAIGGARFDD GAGGDNEVQR TMLEIVNQLD
301: GFDARGNIKV LMATNRPDTL DPALLRPGRL DRKVEFGLPD LEGRTQIFKI HTRTMNCERD IRFELLARLC PNATGADIRS VCTEAGMYAI RARRKTVTEK
401: DFLDSVNKVI KGYQKFSATP KYMVYN

Best Arabidopsis Sequence Match ( AT1G53750.1 )
(BLAST)

001: MVRDIEDEIR DEKNPRPLDE DDIALLKTYG LGPYSAPIKK VEKEIKDLAK KINDLCGIKE SDTGLAPPSQ WDLVSDKQMM QEEQPLQVAR CTKIISPNTE
101: DAKYVINVKQ IAKFVVGLGD KVSPTDIEEG MRVGVDRNKY QIQIPLPPKI DPSVTMMTVE EKPDVTYNDV GGCKEQIEKM REVVELPMLH PEKFVKLGID
201: PPKGVLCYGP PGTGKTLLAR AVANRTDACF IRVIGSELVQ KYVGEGARMV RELFQMARSK KACIVFFDEV DAIGGARFDD GVGGDNEVQR TMLEIVNQLD
301: GFDARGNIKV LMATNRPDTL DPALLRPGRL DRKVEFGLPD LESRTQIFKI HTRTMNCERD IRFELLARLC PNSTGADIRS VCTEAGMYAI RARRKTVTEK
401: DFLDAVNKVI KGYQKFSATP KYMVYN

Arabidopsis Description

RPT1ARPT1A [Source:UniProtKB/TrEMBL;Acc:A0A178W3N8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.