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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 2
  • mitochondrion 2
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:mitochondrion, plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:mitochondrion
TargetP:plastid
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS7A01G025800.1 Wheat mitochondrion 85.14 86.88
TraesCS7D01G023600.1 Wheat mitochondrion 85.02 86.75
TraesCS4A01G463300.1 Wheat mitochondrion 84.77 86.5
Zm00001d045566_P001 Maize cytosol, mitochondrion 69.41 72.4
EER87717 Sorghum cytosol 69.79 72.13
Zm00001d035913_P002 Maize cytosol, mitochondrion 65.92 72.03
Zm00001d009592_P001 Maize cytosol 23.22 70.99
Os06t0109400-01 Rice cytosol 67.04 69.74
Zm00001d022096_P002 Maize mitochondrion 60.67 64.2
CDY25624 Canola cytosol 19.73 62.95
GSMUA_Achr4P03560_001 Banana mitochondrion 59.05 60.49
HORVU3Hr1G029660.1 Barley cytosol, peroxisome 2.37 55.88
KRH44049 Soybean nucleus 53.18 53.86
VIT_01s0010g02600.t01 Wine grape cytosol 54.43 52.85
CDX74308 Canola mitochondrion 45.94 52.12
Solyc01g068330.2.1 Tomato nucleus 53.31 52.01
PGSC0003DMT400046254 Potato cytosol 53.31 51.95
PGSC0003DMT400015455 Potato mitochondrion 47.32 49.67
CDX91939 Canola cytosol, mitochondrion 46.19 47.62
CDX84794 Canola cytosol 42.95 46.3
AT3G01610.2 Thale cress nucleus 47.44 45.78
Bra022833.1-P Field mustard cytosol 42.45 45.76
CDY23949 Canola cytosol 40.7 44.97
Bra000999.1-P Field mustard cytosol, mitochondrion 46.44 44.66
CDX89698 Canola endoplasmic reticulum 38.08 43.88
CDY45794 Canola nucleus 43.57 43.79
KRH10420 Soybean mitochondrion 25.34 41.01
HORVU2Hr1G086170.2 Barley cytosol 28.59 40.25
HORVU5Hr1G069560.1 Barley cytosol 10.61 40.09
HORVU0Hr1G038060.2 Barley cytosol 25.59 38.75
HORVU6Hr1G053620.1 Barley cytosol 17.23 38.44
HORVU3Hr1G067470.2 Barley cytosol 10.74 37.89
HORVU6Hr1G049800.1 Barley cytosol 2.62 37.5
HORVU0Hr1G006340.1 Barley cytosol 30.96 31.47
HORVU2Hr1G107280.1 Barley cytosol 14.48 31.35
HORVU4Hr1G072010.4 Barley cytosol 31.34 30.8
HORVU3Hr1G029450.1 Barley cytosol 30.96 30.69
HORVU1Hr1G060370.1 Barley cytosol 30.84 30.61
HORVU4Hr1G071960.2 Barley cytosol 31.21 30.6
HORVU7Hr1G084550.2 Barley cytosol 16.1 30.5
HORVU2Hr1G014000.1 Barley cytosol 15.61 30.49
HORVU3Hr1G029440.1 Barley cytosol 30.96 30.47
HORVU1Hr1G049910.1 Barley cytosol 30.96 30.47
HORVU1Hr1G060340.2 Barley cytosol 30.84 30.38
HORVU2Hr1G011690.1 Barley cytosol 30.46 29.61
HORVU6Hr1G087650.1 Barley cytosol, plasma membrane 13.86 28.91
HORVU6Hr1G083150.1 Barley cytosol 15.36 28.87
HORVU7Hr1G119300.13 Barley cytosol 14.48 28.86
HORVU6Hr1G032570.5 Barley cytosol 14.61 28.61
HORVU4Hr1G055060.1 Barley cytosol 15.86 28.22
HORVU7Hr1G032070.1 Barley cytosol 15.61 28.15
HORVU2Hr1G014770.2 Barley cytosol, plastid 15.48 28.12
HORVU6Hr1G036990.7 Barley cytosol 15.86 27.49
HORVU0Hr1G013350.2 Barley cytosol 10.49 27.27
HORVU7Hr1G090380.3 Barley cytosol 14.73 27.06
HORVU1Hr1G015310.16 Barley cytosol, plastid 29.46 23.48
HORVU4Hr1G016200.10 Barley cytosol, plastid 28.71 22.86
HORVU2Hr1G104530.9 Barley cytosol 22.6 19.82
HORVU3Hr1G095530.3 Barley mitochondrion, plastid 6.12 19.52
HORVU1Hr1G091080.1 Barley mitochondrion, plastid 5.87 18.73
HORVU7Hr1G058410.7 Barley cytosol, peroxisome 21.22 15.36
HORVU5Hr1G078590.8 Barley plastid 20.97 14.87
Protein Annotations
EnsemblPlants:HORVU7Hr1G002880.2EnsemblPlantsGene:HORVU7Hr1G002880Gene3D:1.10.8.60Gene3D:3.40.50.300GO:GO:0000166GO:GO:0003674
GO:GO:0005488GO:GO:0005524InterPro:AAA+_ATPaseInterPro:ATPase_AAA_CSInterPro:ATPase_AAA_coreInterPro:P-loop_NTPase
PANTHER:PTHR23077PANTHER:PTHR23077:SF55PFAM:PF00004ScanProsite:PS00674SEG:segSMART:SM00382
SUPFAM:SSF52540UniParc:UPI000B47CD16UniProt:A0A287VDZ7MapMan:35.1::
Description
No Description!
Coordinates
chrchr7H:+:5387454..5392647
Molecular Weight (calculated)
87020.8 Da
IEP (calculated)
7.754
GRAVY (calculated)
-0.400
Length
801 amino acids
Sequence
(BLAST)
001: RHRRRRWRSA RATSGRCGPT PSSPTSGGSY PRPGSPCRAA APTTSPPRSA PATRTCAASS TPRSWPPSAA PSSPSPSPPP PAPAPTPTWT PAPPPPPPAA
101: ATADDDDDAP SPPPAFDVTK AMLRTRYASL TPRKEPAAAA AAAASQQLEI ELNSEKPRRR VTTDGGGGGG GDPKQEAGAS EGGGGGGAKG PRFSDLGGME
201: TVIDELMMEV VVPLCHPELP LRLGVRPVAG ILLHGPPGCG KTTLAHAIAN ETGVPFYKIS APEVVSGVSG ASEENIRVLF KKAYRTAPSI VFIDEIDAIA
301: SKRENLQREM ERRIVTQLMT CMDEFHQNVG SDGGDLDSQS SEKKPGYVIV IGATNRPDAV DQALRRPGRF DREISLGVPD EIGRKQILKM LTQNLTLEKD
401: QFDLFKIARA TPGFVGADLK ALVDKAGNLA MKRIIVERKK QSGGGDVNSK QDWWRHPWSE DEMDSLCITM DDFEEAATMV QPSLRREGFS SVPDVTWEDV
501: GGLDSLKKEF DRCIVRCIKH PEVYKDFGVN MQAGFLLFGP PGCGKTLIAK AVAHDAGANF IHIKGPELLN KYVGESESEV RKIFTRARIN SPCILFFDEI
601: DALTTKRGKE GGWVVERLLN QLLVELDGAD QRHGVYVIGA TNRYCQLPLL CTCLYLSVRF ILLLYFWCRI DVIDEAVLRP GRFGKKHFVP LPGADERVAI
701: LKAHTEKKTL SEDVDLETIA RREECNNLTG ADLASLVNEA AMAALEERCE FLAKGDSSMS TDLTNKIKLQ HFEHALSKVK PSVSEQQRKH FDALSKKYSA
801: N
Best Arabidopsis Sequence Match ( AT3G01610.2 )
(BLAST)
001: MGRRGRGGGG GMGGGINRRY LSQVMDTCGK DLSTAEDIVD DLRSRYGNFA RLTRQVLLLN VRQVLNVRNN KRVKDEDEDD NIGDEEGSAS QRKKQRRVDE
101: KEEKLQRAEQ SHLRKRNMER SVSSSPSSSS SSEDSGDVST SEDAVYGEKL SPPRFDLIND SLRDNYAKLN SSSKKPIGSP AEKNVEVETV SNKGRSKLAT
201: MGARKEAKVS LSLSGATGNG DLEVEGTKGP TFKDFGGIKK ILDELEMNVL FPILNPEPFK KIGVKPPSGI LFHGPPGCGK TKLANAIANE AGVPFYKISA
301: TEVISGVSGA SEENIRELFS KAYRTAPSIV FIDEIDAIGS KRENQQREME KRIVTQLLTC MDGPGNKGDK NAPDSSAGFV LVIGATNRPD ALDPALRRSG
401: RFETEIALTA PDEDARAEIL SVVAQKLRLE GPFDKKRIAR LTPGFVGADL ESVAYLAGRK AIKRILDSRK SEQSGDGEDD KSWLRMPWPE EELEKLFVKM
501: SDFEEAVNLV QASLTREGFS IVPDVKWDDV GGLDHLRLQF NRYIVRPIKK PDIYKAFGVD LETGFLLYGP PGCGKTLIAK AAANEAGANF MHIKGAELLN
601: KYVGESELAI RTLFQRARTC APCVIFFDEV DALTTSRGKE GAWVVERLLN QFLVELDGGE RRNVYVIGAT NRPDVVDPAF LRPGRFGNLL YVPLPNADER
701: ASILKAIARK KPIDPSVDLD GIAKNNCEGF SGADLAHLVQ KATFQAVEEM IGSSESSEDD VTDITQCTIK TRHFEQALSL VSPSVNKQQR RHYDALSTKL
801: QESVGRNTEQ VTIGPSFTLE DEIEKARTKS
Arabidopsis Description
CDC48CCell division cycle 48C [Source:UniProtKB/TrEMBL;Acc:A0A1I9LNC6]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.