Factsheet for HORVU6Hr1G053620.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU5Hr1G069560.1	Barley	cytosol	54.87	92.92
HORVU3Hr1G029660.1	Barley	cytosol, peroxisome	6.69	70.59
HORVU2Hr1G011690.1	Barley	cytosol	91.64	39.93
TraesCS2A01G060000.1	Wheat	cytosol	89.69	37.27
EES14976	Sorghum	cytosol	79.11	35.86
Zm00001d050303_P001	Maize	cytosol	77.44	35.19
HORVU0Hr1G038060.2	Barley	cytosol	46.52	31.57
HORVU0Hr1G006340.1	Barley	cytosol	68.8	31.35
HORVU1Hr1G060370.1	Barley	cytosol	69.92	31.1
HORVU1Hr1G060340.2	Barley	cytosol	69.92	30.87
HORVU3Hr1G029450.1	Barley	cytosol	68.8	30.57
HORVU4Hr1G072010.4	Barley	cytosol	69.36	30.55
HORVU4Hr1G071960.2	Barley	cytosol	69.36	30.48
HORVU1Hr1G049910.1	Barley	cytosol	69.08	30.47
Os08t0413000-00	Rice	mitochondrion	76.6	30.42
HORVU3Hr1G029440.1	Barley	cytosol	68.8	30.34
HORVU2Hr1G086170.2	Barley	cytosol	35.1	22.14
HORVU7Hr1G002880.2	Barley	plastid	38.44	17.23
HORVU1Hr1G015310.16	Barley	cytosol, plastid	37.6	13.43
HORVU4Hr1G016200.10	Barley	cytosol, plastid	37.33	13.32
HORVU3Hr1G095530.3	Barley	mitochondrion, plastid	8.36	11.95
HORVU0Hr1G013350.2	Barley	cytosol	10.03	11.69
HORVU1Hr1G091080.1	Barley	mitochondrion, plastid	8.08	11.55
HORVU7Hr1G032070.1	Barley	cytosol	11.7	9.46
HORVU6Hr1G083150.1	Barley	cytosol	10.86	9.15
HORVU6Hr1G032570.5	Barley	cytosol	10.31	9.05
HORVU7Hr1G090380.3	Barley	cytosol	10.31	8.49
HORVU7Hr1G119300.13	Barley	cytosol	9.47	8.46
HORVU6Hr1G087650.1	Barley	cytosol, plasma membrane	8.91	8.33
HORVU2Hr1G104530.9	Barley	cytosol	20.06	7.89
HORVU2Hr1G014770.2	Barley	cytosol, plastid	8.91	7.26
HORVU4Hr1G055060.1	Barley	cytosol	8.91	7.11
HORVU2Hr1G014000.1	Barley	cytosol	8.08	7.07
HORVU2Hr1G107280.1	Barley	cytosol	6.69	6.49
HORVU7Hr1G084550.2	Barley	cytosol	7.24	6.15
HORVU6Hr1G036990.7	Barley	cytosol	7.24	5.63
HORVU7Hr1G058410.7	Barley	cytosol, peroxisome	16.99	5.51
HORVU5Hr1G078590.8	Barley	plastid	17.27	5.49
HORVU6Hr1G049800.1	Barley	cytosol	0.56	3.57
HORVU3Hr1G067470.2	Barley	cytosol	0.28	0.44

Protein Annotations

EnsemblPlants:HORVU6Hr1G053620.1	EnsemblPlantsGene:HORVU6Hr1G053620	Gene3D:1.10.8.60	Gene3D:3.10.330.10	Gene3D:3.40.50.300	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	InterPro:AAA+_ATPase	InterPro:ATPase_AAA_CS	InterPro:ATPase_AAA_core
InterPro:P-loop_NTPase	PANTHER:PTHR23077	PANTHER:PTHR23077:SF73	PFAM:PF00004	ScanProsite:PS00674	SMART:SM00382
SUPFAM:SSF52540	UniParc:UPI000B4806AC	UniProt:A0A287U6X6	MapMan:35.1	:	:

Description

No Description!

Coordinates

chrchr6H:+:335459771..335461373

Molecular Weight (calculated)

39464.4 Da

IEP (calculated)

4.572

GRAVY (calculated)

-0.185

Length

359 amino acids

Sequence
(BLAST)

001: VPLLDTDPDE CVVVAPGTEV FCHDAHPVKQ EDEERLDGPG YDDVGGVRKQ LAQIRELVEL PLRHPKLFKT LGVKPSKGIL LYGPHGTGKT LLARAIAAES
101: GANFVVINGP EIMSMMAGQS KDNLRKVFAQ AEAQAPSIIF MDEIDAIAPN REKTHGEVER RVVSQLLTLM DGLCPRAQVM VIGATNRPNS IDPALRRFGR
201: FDKEIDIGVP DEVDSLEILR INSKDMPLSD DVDLERIGKD THGFVGADLA ALCSEAAFQC IRQKMDVLDL EADTIDVEVL NSMSVIMDDL VHAKEVTKPS
301: ALRETGLVEV PKVSWEDVGG LEDVKLELQE TVQYPVEHPG NRGREKTIYH IQFACAFLS

Best Arabidopsis Sequence Match ( AT2G03670.1 )
(BLAST)

001: MLETESSVCD NIAGNEKWRA EAEIGGNERA LQALRELIIF PFRYPLEART LGLKWPRGLL LYGPPGTGKT SLVRAVVQEC DAHLIVLSPH SVHRAHAGES
101: EKVLREAFAE ASSHAVSDKP SVIFIDEIDV LCPRRDARRE QDVRIASQLF TLMDSNKPSS SAPRVVVVAS TNRVDAIDPA LRRAGRFDAL VEVSTPNEED
201: RLKILQLYTK KVNLDPSVDL QAIAISCNGY VGADLEALCR EATISASKRS SDSLILTSQD FKIAKSVVGP SINRGITVEI PKVTWDDVGG LKDLKKKLQQ
301: AVEWPIKHSA AFVKMGISPM RGILLHGPPG CSKTTLAKAA ANAAQASFFS LSCAELFSMY VGEGEALLRN TFQRARLASP SIIFFDEADV VACKRGDESS
401: SNSSTVGERL LSTLLTEMDG LEEAKGILVL AATNRPYAID AALMRPGRFD LVLYVPPPDL EARFEILQVH TRNMTLGDDV DLRKIAEETD LFTGAELEGL
501: CRESGTVSLR ENIAATAVFN RHFQTAKSSL KPALTIEEVE TYSSFRKAAK RSDSKPIPIN KKKATSTVFG FSWQLGVLSL LLLATGNYYF NHTKHELLVA
601: SAT

Arabidopsis Description

CDC48BCell division control protein 48 homolog B [Source:UniProtKB/Swiss-Prot;Acc:Q9ZPR1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.