Factsheet for HORVU2Hr1G011690.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
MultiLoc:	cytosol
TargetP:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU6Hr1G053620.1	Barley	cytosol	39.93	91.64
HORVU5Hr1G069560.1	Barley	cytosol	23.54	91.51
TraesCS2A01G060000.1	Wheat	cytosol	91.02	86.81
EES14976	Sorghum	cytosol	74.27	77.27
Zm00001d050303_P001	Maize	cytosol	73.54	76.71
HORVU3Hr1G029660.1	Barley	cytosol, peroxisome	3.03	73.53
HORVU0Hr1G038060.2	Barley	cytosol	43.2	67.3
Os08t0413000-00	Rice	mitochondrion	73.42	66.92
HORVU0Hr1G006340.1	Barley	cytosol	63.11	65.99
HORVU1Hr1G060370.1	Barley	cytosol	64.56	65.92
HORVU1Hr1G060340.2	Barley	cytosol	64.56	65.44
HORVU4Hr1G071960.2	Barley	cytosol	64.68	65.24
HORVU1Hr1G049910.1	Barley	cytosol	64.44	65.23
HORVU4Hr1G072010.4	Barley	cytosol	64.44	65.15
HORVU3Hr1G029450.1	Barley	cytosol	63.23	64.48
HORVU3Hr1G029440.1	Barley	cytosol	63.23	64.0
HORVU3Hr1G067470.2	Barley	cytosol	11.16	40.53
HORVU2Hr1G086170.2	Barley	cytosol	27.79	40.25
HORVU2Hr1G107280.1	Barley	cytosol	14.81	32.97
HORVU2Hr1G014000.1	Barley	cytosol	16.14	32.44
HORVU6Hr1G049800.1	Barley	cytosol	2.18	32.14
HORVU6Hr1G087650.1	Barley	cytosol, plasma membrane	14.68	31.51
HORVU6Hr1G083150.1	Barley	cytosol	16.14	31.22
HORVU7Hr1G032070.1	Barley	cytosol	16.63	30.86
HORVU7Hr1G002880.2	Barley	plastid	29.61	30.46
HORVU7Hr1G119300.13	Barley	cytosol	14.81	30.35
HORVU6Hr1G032570.5	Barley	cytosol	14.93	30.07
HORVU7Hr1G090380.3	Barley	cytosol	15.29	28.9
HORVU7Hr1G084550.2	Barley	cytosol	14.68	28.61
HORVU4Hr1G055060.1	Barley	cytosol	15.17	27.78
HORVU0Hr1G013350.2	Barley	cytosol	10.32	27.6
HORVU2Hr1G014770.2	Barley	cytosol, plastid	14.68	27.44
HORVU1Hr1G015310.16	Barley	cytosol, plastid	32.89	26.97
HORVU4Hr1G016200.10	Barley	cytosol, plastid	32.89	26.94
HORVU6Hr1G036990.7	Barley	cytosol	15.05	26.84
HORVU2Hr1G104530.9	Barley	cytosol	25.49	23.0
HORVU3Hr1G095530.3	Barley	mitochondrion, plastid	6.07	19.92
HORVU1Hr1G091080.1	Barley	mitochondrion, plastid	5.95	19.52
HORVU7Hr1G058410.7	Barley	cytosol, peroxisome	22.82	16.98
HORVU5Hr1G078590.8	Barley	plastid	22.57	16.46

Protein Annotations

Gene3D:1.10.8.60	MapMan:19.2.4.2.1	Gene3D:2.40.40.20	Gene3D:3.10.330.10	Gene3D:3.40.50.300	UniProt:A0A287H2W8
InterPro:AAA+_ATPase	InterPro:AAA_ATPase_CDC48	InterPro:ATPase_AAA_CS	InterPro:ATPase_AAA_core	InterPro:Asp_de-COase-like_dom_sf	InterPro:CDC48_domain_2-like_sf
InterPro:CDC4_N-term_subdom	InterPro:Cdc48_dom2	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005524	GO:GO:0016787	EnsemblPlantsGene:HORVU2Hr1G011690	EnsemblPlants:HORVU2Hr1G011690.1	InterPro:P-loop_NTPase	PFAM:PF00004
PFAM:PF02359	PFAM:PF02933	ScanProsite:PS00674	PANTHER:PTHR23077	PANTHER:PTHR23077:SF73	SMART:SM00382
SMART:SM01072	SMART:SM01073	SUPFAM:SSF50692	SUPFAM:SSF52540	SUPFAM:SSF54585	TIGRFAMs:TIGR01243
UniParc:UPI000B4617B9	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrchr2H:-:23638375..23641224

Molecular Weight (calculated)

90589.0 Da

IEP (calculated)

5.583

GRAVY (calculated)

-0.223

Length

824 amino acids

Sequence
(BLAST)

001: FGGKPSTRSS PSPRSLIRSS EEAWSVDRSL AMEPPKKDYS TAILERKKAP NRLVVDDAEG GVAVDSSRVA LSPATMDALH IFRNDVVVLR GKRRRETVCY
101: AAKDESCPDG LARVNRVVRG NLRLRLGDLV TVSLCAGIKD AARVAICPYE DSVDGISGNL FDAYLKPYFK DARRPVRRGD RFVVRGNMHA VEFKVVDTDP
201: DECVVVAPGT EVFCHDANPV KREDEERLDG PGYDDVGGIR KQLAQIRELV ELPLRHPKLF KTLGVKPPKG ILLYGPPGTG KTLLARAIAA ESGANFVVIN
301: GPEIMSMMAG QSEDNLRKVF AQAEAHAPSI IFMDEIDAIA PNREKTRGEV ERRVVSQLLT LMDGLCPRAQ VMVIGATNRP NSIDPALRRF GRFDKEIDIG
401: VPDEVGRLEI LRIHSKDMPL SDDVDLERIG KDTHGFVGAD LAALCSEAAF QCIRQKMDVL DLEADTIDVE VLNSMSVIMD DLVHAKEVTK PSALRETGLV
501: EVPKVSWEDV GGLEDVKLEL QETVQYPVEH PEMFEFFGME PSRGVLLYGP PGCGKTLLAK AIARECKANF ISVKGPELLT MWFGESESNV RDLFDKARQS
601: APCVLLFDEL DSIAVKRGNS VGDASDRVLN QLLTEMDGIN AKKTVFVIGA TNRPDIIDPA LLRPGRLDQL IYIPLPDEAS RLQIFKSCLR RSPLSRRVNL
701: PDLARSTAGF SGADITEICQ RACKLAVRDL VQRSSLVGKA VAMAGAEITR KNFLGAMEHA RRSVSDLDVL KYEYFARKFK QGGSFEEEAP PQVGPPQGHL
801: ELKAAEDVDA STDEVSLQIC NLQI

Best Arabidopsis Sequence Match ( AT3G01610.1 )
(BLAST)

001: MGRRGRGGGG GMGGGINRRY LSQVMDTCGK DLSTAEDIVD DLRSRYGNFA RLTRQVLLLN VRQVLNVRNN KRVKDEDEDD NIGDEEGSAS QRKKQRRVDE
101: KEEKLQRAEQ SHLRKRNMER SVSSSPSSSS SSEDSGDVST SEDAVYGEKL SPPRFDLIND SLRDNYAKLN SSSKKPIGSP AEKNVEVETV SNKGRSKLAT
201: MGARKEAKVS LSLSGATGNG DLEVEGTKGP TFKDFGGIKK ILDELEMNVL FPILNPEPFK KIGVKPPSGI LFHGPPGCGK TKLANAIANE AGVPFYKISA
301: TEVISGVSGA SEENIRELFS KAYRTAPSIV FIDEIDAIGS KRENQQREME KRIVTQLLTC MDGPGNKGDK NAPDSSAGFV LVIGATNRPD ALDPALRRSG
401: RFETEIALTA PDEDARAEIL SVVAQKLRLE GPFDKKRIAR LTPGFVGADL ESVAYLAGRK AIKRILDSRK SEQSGDGEDD KSWLRMPWPE EELEKLFVKM
501: SDFEEAVNLV QASLTREGFS IVPDVKWDDV GGLDHLRLQF NRYIVRPIKK PDIYKAFGVD LETGFLLYGP PGCGKTLIAK AAANEAGANF MHIKGAELLN
601: KYVGESELAI RTLFQRARTC APCVIFFDEV DALTTSRGKE GAWVVERLLN QFLVELDGGE RRNVYVIGAT NRPDVVDPAF LRPGRFGNLL YVPLPNADER
701: ASILKAIARK KPIDPSVDLD GIAKNNCEGF SGADLAHLVQ KATFQAVEEM IGSSESSEDD VTDITQCTIK TRHFEQALSL VSPSVNKQQR RHYDALSTKL
801: QESVGRNTEQ VTIGPSFTLE

Arabidopsis Description

CDC48CCell division cycle 48C [Source:UniProtKB/TrEMBL;Acc:A0A1I9LNC6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.