Factsheet for HORVU1Hr1G060370.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU1Hr1G060340.2	Barley	cytosol	100.0	99.26
HORVU0Hr1G038060.2	Barley	cytosol	62.33	95.09
TraesCS1B01G235400.1	Wheat	cytosol	75.34	94.7
TraesCS1D01G223800.1	Wheat	cytosol	93.68	94.5
TraesCS1B01G235300.1	Wheat	cytosol	93.68	94.5
TraesCS1D01G253100.1	Wheat	cytosol	93.43	94.25
TraesCS1A01G222100.1	Wheat	cytosol	93.43	94.25
HORVU3Hr1G029660.1	Barley	cytosol, peroxisome	3.97	94.12
TraesCS1B01G235500.1	Wheat	cytosol	92.94	93.75
TraesCSU01G001000.1	Wheat	cytosol	93.06	93.52
HORVU1Hr1G049910.1	Barley	cytosol	92.94	92.14
HORVU4Hr1G071960.2	Barley	cytosol	91.95	90.82
HORVU4Hr1G072010.4	Barley	cytosol	91.45	90.55
Os03t0151800-02	Rice	cytosol, extracellular, nucleus, plasma membrane, plastid	90.46	90.23
Zm00001d014124_P001	Maize	cytosol, plasma membrane	90.46	90.01
EER94171	Sorghum	cytosol	90.33	90.0
EER92840	Sorghum	cytosol	90.33	90.0
Zm00001d032859_P006	Maize	plasma membrane	90.09	89.75
HORVU0Hr1G006340.1	Barley	cytosol	79.8	81.73
GSMUA_Achr3P00260_001	Banana	cytosol	49.32	81.56
HORVU3Hr1G029450.1	Barley	cytosol	79.93	79.83
HORVU3Hr1G029440.1	Barley	cytosol	79.93	79.24
HORVU6Hr1G053620.1	Barley	cytosol	31.1	69.92
HORVU5Hr1G069560.1	Barley	cytosol	18.22	69.34
HORVU2Hr1G011690.1	Barley	cytosol	65.92	64.56
HORVU2Hr1G086170.2	Barley	cytosol	28.87	40.95
HORVU3Hr1G067470.2	Barley	cytosol	10.9	38.77
HORVU6Hr1G049800.1	Barley	cytosol	2.35	33.93
HORVU2Hr1G107280.1	Barley	cytosol	14.75	32.16
HORVU6Hr1G032570.5	Barley	cytosol	16.23	32.03
HORVU6Hr1G083150.1	Barley	cytosol	16.85	31.92
HORVU7Hr1G119300.13	Barley	cytosol	15.74	31.59
HORVU2Hr1G014000.1	Barley	cytosol	15.99	31.46
HORVU6Hr1G087650.1	Barley	cytosol, plasma membrane	14.87	31.25
HORVU7Hr1G002880.2	Barley	plastid	30.61	30.84
HORVU7Hr1G090380.3	Barley	cytosol	16.6	30.73
HORVU7Hr1G032070.1	Barley	cytosol	16.73	30.41
HORVU7Hr1G084550.2	Barley	cytosol	14.87	28.37
HORVU4Hr1G055060.1	Barley	cytosol	15.61	28.0
HORVU0Hr1G013350.2	Barley	cytosol	10.53	27.6
HORVU4Hr1G016200.10	Barley	cytosol, plastid	34.2	27.44
HORVU1Hr1G015310.16	Barley	cytosol, plastid	33.58	26.97
HORVU2Hr1G014770.2	Barley	cytosol, plastid	14.62	26.76
HORVU6Hr1G036990.7	Barley	cytosol	14.75	25.76
HORVU2Hr1G104530.9	Barley	cytosol	26.39	23.33
HORVU3Hr1G095530.3	Barley	mitochondrion, plastid	6.2	19.92
HORVU1Hr1G091080.1	Barley	mitochondrion, plastid	5.95	19.12
HORVU5Hr1G078590.8	Barley	plastid	22.68	16.19
HORVU7Hr1G058410.7	Barley	cytosol, peroxisome	22.18	16.17

Protein Annotations

Gene3D:1.10.8.60	MapMan:19.2.4.2.1	Gene3D:2.40.40.20	Gene3D:3.10.330.10	Gene3D:3.40.50.300	UniProt:A0A287FUK5
InterPro:AAA+_ATPase	InterPro:AAA_ATPase_CDC48	InterPro:ATPase_AAA_CS	InterPro:ATPase_AAA_core	InterPro:Asp_de-COase-like_dom_sf	InterPro:CDC48_domain_2-like_sf
InterPro:CDC4_N-term_subdom	InterPro:Cdc48_dom2	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005524	GO:GO:0016787	EnsemblPlantsGene:HORVU1Hr1G060370	EnsemblPlants:HORVU1Hr1G060370.1	InterPro:P-loop_NTPase	PFAM:PF00004
PFAM:PF02359	PFAM:PF02933	ScanProsite:PS00674	PANTHER:PTHR23077	PANTHER:PTHR23077:SF122	SMART:SM00382
SMART:SM01072	SMART:SM01073	SUPFAM:SSF50692	SUPFAM:SSF52540	SUPFAM:SSF54585	TIGRFAMs:TIGR01243
UniParc:UPI000B47B260	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrchr1H:+:438975012..438977435

Molecular Weight (calculated)

89873.3 Da

IEP (calculated)

4.974

GRAVY (calculated)

-0.387

Length

807 amino acids

Sequence
(BLAST)

001: IETNARPMAR QGDPSGKKDY STAILERKRS PNRLEVDETT DDENSVVALH PDTMDSLQLF RGDTVLLKGK KRRDTVCILL PDDTCDKAKV RMNRVVRKNL
101: RVRLGDVVSV HQCPDVRYGK RVHVLPVDDT VQGMTGNLFD AFLRPYFLEA YRPLRKGDLF LVRGGMTSVE FKVVETDPAE YCIVAPDTEV FCDGEPVKRE
201: DEERLDDVGY DDVGGVRKQM AQIRELVELP LRHPQLFKSI GVKPPKGILL YGPPGTGKTL IARAVANETG AFFFLINGPE IMSKLAGESE SNLRKAFEEA
301: EKNAPAIIFI DEIDSIAPKR EKTNGEVERR IVSQLLTLMD GLKSRAHVIV MGATNRPNSI DPALRRFGRF DREIDIGVPD EVGRLEVLRI HTKNMKLAED
401: VELEHVSRDT HGYVGADLAA LCTEAALQCI REKMDIIDLE DDTIDAEILN SMAVTNDHFK IALGTSNPSA LRETMVEVPN VSWEDIGGLE SVKRELQETV
501: QYPVEHPEKF EKFGMAPSKG VLFYGPPGCG KTLLAKAIAN ECQANFISIK GPELLTMWFG ESEANVREIF DKARGSAPCV LFFDELDSIA TKRGSSVGDA
601: GGAADRVLNQ LLTEMDGMNA KKTVFIIGAT NRPDIIDPAL LRPGRLDQLI YIPLPDVESR LQIFRACLRK SPVAKDVDLN ALAKYTQGFS GADITEICQR
701: ACKYAIRENI EKDMEKERRR KDNPEAMEED EVDEIRAAHL EESMRYARRS VSDADIRKYQ AFAQTLQQSR GFGTEFRFPD RPVGGATAAA DPFASAATAA
801: EEDDLYS

Best Arabidopsis Sequence Match ( AT3G53230.1 )
(BLAST)

001: MANQAESSDS KGTKKDFSTA ILEKKKAANR LVVDEAINDD NSVVSLHPDT MEKLQLFRGD TILIKGKKRK DTVCIALADE TCDEPKIRMN KVVRSNLRVR
101: LGDVISVHQC PDVKYGNRVH ILPLDDTIEG VSGNIFDAYL KPYFLEAYRP VRKGDLFLVR GGMRSIEFKV IETDPAEYCV VAPDTEIFCE GEPIKREDEE
201: RLDEVGYDDV GGVRKQMAQI RELVELPLRH PQLFKSIGVK PPKGILLYGP PGSGKTLIAR AVANETGAFF FCINGPEIMS KLAGESESNL RKAFEEAEKN
301: APSIIFIDEI DSIAPKREKT HGEVERRIVS QLLTLMDGLK SRAHVIVMGA TNRPNSIDPA LRRFGRFDRE IDIGVPDEIG RLEVLRIHTK NMKLAEDVDL
401: ERVSKDTHGY VGADLAALCT EAALQCIREK MDVIDLDDEE IDAEILNSMA VSNDHFQTAL GNSNPSALRE TVVEVPNVSW EDIGGLENVK RELQETVQYP
501: VEHPEKFEKF GMSPSKGVLF YGPPGCGKTL LAKAIANECQ ANFISIKGPE LLTMWFGESE ANVREIFDKA RQSAPCVLFF DELDSIATQR GNSVGDAGGA
601: ADRVLNQLLT EMDGMNAKKT VFIIGATNRP DIIDPALLRP GRLDQLIYIP LPDEESRYQI FKSCLRKSPV AKDVDLRALA KYTQGFSGAD ITEICQRSCK
701: YAIRENIEKD IEKERKRAES PEAMEEDEEE IAEIKAGHFE ESMKYARRSV SDADIRKYQA FAQTLQQSRG FGSEFRFPDA PTGTTGAFPG AAATVGGVDP
801: FATSGGAADD DDLYS

Arabidopsis Description

CDC48DCell division control protein 48 homolog D [Source:UniProtKB/Swiss-Prot;Acc:Q9SCN8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.