Factsheet for HORVU5Hr1G069560.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU6Hr1G053620.1	Barley	cytosol	92.92	54.87
HORVU0Hr1G038060.2	Barley	cytosol	69.34	27.79
HORVU2Hr1G011690.1	Barley	cytosol	91.51	23.54
TraesCS2A01G060000.1	Wheat	cytosol	90.09	22.11
EES14976	Sorghum	cytosol	80.66	21.59
Zm00001d050303_P001	Maize	cytosol	78.77	21.14
HORVU0Hr1G006340.1	Barley	cytosol	70.75	19.04
HORVU3Hr1G029450.1	Barley	cytosol	70.75	18.56
HORVU3Hr1G029440.1	Barley	cytosol	70.75	18.43
HORVU1Hr1G060370.1	Barley	cytosol	69.34	18.22
HORVU1Hr1G060340.2	Barley	cytosol	69.34	18.08
HORVU1Hr1G049910.1	Barley	cytosol	69.34	18.06
HORVU4Hr1G072010.4	Barley	cytosol	69.34	18.04
HORVU4Hr1G071960.2	Barley	cytosol	69.34	17.99
Os08t0413000-00	Rice	mitochondrion	76.42	17.92
HORVU2Hr1G086170.2	Barley	cytosol	41.04	15.29
HORVU0Hr1G013350.2	Barley	cytosol	16.04	11.04
HORVU7Hr1G002880.2	Barley	plastid	40.09	10.61
HORVU1Hr1G091080.1	Barley	mitochondrion, plastid	10.85	9.16
HORVU3Hr1G095530.3	Barley	mitochondrion, plastid	10.85	9.16
HORVU1Hr1G015310.16	Barley	cytosol, plastid	40.09	8.46
HORVU4Hr1G016200.10	Barley	cytosol, plastid	40.09	8.45
HORVU6Hr1G087650.1	Barley	cytosol, plasma membrane	13.68	7.55
HORVU6Hr1G032570.5	Barley	cytosol	13.21	6.85
HORVU7Hr1G032070.1	Barley	cytosol	13.68	6.53
HORVU2Hr1G107280.1	Barley	cytosol	11.32	6.49
HORVU6Hr1G083150.1	Barley	cytosol	12.74	6.34
HORVU7Hr1G090380.3	Barley	cytosol	12.74	6.19
HORVU2Hr1G014000.1	Barley	cytosol	11.32	5.85
HORVU7Hr1G119300.13	Barley	cytosol	10.85	5.72
HORVU2Hr1G014770.2	Barley	cytosol, plastid	11.79	5.67
HORVU4Hr1G055060.1	Barley	cytosol	11.79	5.56
HORVU7Hr1G084550.2	Barley	cytosol	10.38	5.2
HORVU6Hr1G036990.7	Barley	cytosol	10.38	4.76
HORVU2Hr1G104530.9	Barley	cytosol	19.81	4.6
HORVU6Hr1G049800.1	Barley	cytosol	0.94	3.57
HORVU5Hr1G078590.8	Barley	plastid	17.92	3.36
HORVU7Hr1G058410.7	Barley	cytosol, peroxisome	17.45	3.34
HORVU3Hr1G067470.2	Barley	cytosol	0.47	0.44
HORVU3Hr1G029660.1	Barley	cytosol, peroxisome	0.0	0.0

Protein Annotations

EnsemblPlants:HORVU5Hr1G069560.1	EnsemblPlantsGene:HORVU5Hr1G069560	Gene3D:1.10.8.60	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005524	InterPro:ATPase_AAA_core	InterPro:P-loop_NTPase	PANTHER:PTHR23077	PANTHER:PTHR23077:SF73
PFAM:PF00004	SUPFAM:SSF52540	UniParc:UPI000B483EBA	UniProt:A0A287RNQ9	MapMan:35.1	:

Description

No Description!

Coordinates

chrchr5H:+:522931609..522933146

Molecular Weight (calculated)

23670.3 Da

IEP (calculated)

4.529

GRAVY (calculated)

-0.259

Length

212 amino acids

Sequence
(BLAST)

001: MDEIDAIAPN REKTYGEVER RVVSQLLTLM DGLCPRAQAM VIGATNRPNS IDPALWRFGR FDKEIDISVP DEVGRLDILR IHSKDMPLSD DVDLERIGKD
101: THGFVGADLA ALCSEAAFQC VRQKMDVLNL EADTIDVEVL NSISVIMDNL VHAKEVTKPS ALRETGLVEV PKVSWEDVGG LEDVKLELHE TVQYPVEHPG
201: NRGTEKTIYH IR

Best Arabidopsis Sequence Match ( AT3G09840.1 )
(BLAST)

001: MSTPAESSDS KSKKDFSTAI LERKKSPNRL VVDEAINDDN SVVSLHPATM EKLQLFRGDT ILIKGKKRKD TVCIALADET CEEPKIRMNK VVRSNLRVRL
101: GDVISVHQCP DVKYGKRVHI LPVDDTVEGV TGNLFDAYLK PYFLEAYRPV RKGDLFLVRG GMRSVEFKVI ETDPAEYCVV APDTEIFCEG EPVKREDEER
201: LDDVGYDDVG GVRKQMAQIR ELVELPLRHP QLFKSIGVKP PKGILLYGPP GSGKTLIARA VANETGAFFF CINGPEIMSK LAGESESNLR KAFEEAEKNA
301: PSIIFIDEID SIAPKREKTN GEVERRIVSQ LLTLMDGLKS RAHVIVMGAT NRPNSIDPAL RRFGRFDREI DIGVPDEIGR LEVLRIHTKN MKLAEDVDLE
401: RISKDTHGYV GADLAALCTE AALQCIREKM DVIDLEDDSI DAEILNSMAV TNEHFHTALG NSNPSALRET VVEVPNVSWN DIGGLENVKR ELQETVQYPV
501: EHPEKFEKFG MSPSKGVLFY GPPGCGKTLL AKAIANECQA NFISVKGPEL LTMWFGESEA NVREIFDKAR QSAPCVLFFD ELDSIATQRG GGSGGDGGGA
601: ADRVLNQLLT EMDGMNAKKT VFIIGATNRP DIIDSALLRP GRLDQLIYIP LPDEDSRLNI FKAALRKSPI AKDVDIGALA KYTQGFSGAD ITEICQRACK
701: YAIRENIEKD IEKEKRRSEN PEAMEEDGVD EVSEIKAAHF EESMKYARRS VSDADIRKYQ AFAQTLQQSR GFGSEFRFEN SAGSGATTGV ADPFATSAAA
801: AGDDDDLYN

Arabidopsis Description

CDC48AAT3G09840 protein [Source:UniProtKB/TrEMBL;Acc:B9DI55]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.