Factsheet for HORVU6Hr1G049800.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
plastid 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
MultiLoc:	cytosol
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G067470.2	Barley	cytosol	25.0	6.17
HORVU6Hr1G032570.5	Barley	cytosol	35.71	4.89
HORVU7Hr1G032070.1	Barley	cytosol	35.71	4.5
HORVU6Hr1G083150.1	Barley	cytosol	33.93	4.46
HORVU7Hr1G090380.3	Barley	cytosol	33.93	4.36
HORVU2Hr1G107280.1	Barley	cytosol	28.57	4.32
HORVU4Hr1G055060.1	Barley	cytosol	33.93	4.22
HORVU6Hr1G087650.1	Barley	cytosol, plasma membrane	28.57	4.17
HORVU2Hr1G014000.1	Barley	cytosol	30.36	4.15
HORVU2Hr1G014770.2	Barley	cytosol, plastid	32.14	4.08
HORVU7Hr1G084550.2	Barley	cytosol	30.36	4.02
HORVU7Hr1G119300.13	Barley	cytosol	28.57	3.98
HORVU6Hr1G036990.7	Barley	cytosol	30.36	3.68
HORVU2Hr1G086170.2	Barley	cytosol	33.93	3.34
HORVU0Hr1G038060.2	Barley	cytosol	30.36	3.21
HORVU0Hr1G013350.2	Barley	cytosol	16.07	2.92
HORVU7Hr1G002880.2	Barley	plastid	37.5	2.62
HORVU0Hr1G006340.1	Barley	cytosol	33.93	2.41
HORVU1Hr1G060370.1	Barley	cytosol	33.93	2.35
HORVU3Hr1G029450.1	Barley	cytosol	33.93	2.35
HORVU1Hr1G060340.2	Barley	cytosol	33.93	2.34
HORVU3Hr1G029440.1	Barley	cytosol	33.93	2.33
HORVU1Hr1G049910.1	Barley	cytosol	33.93	2.33
HORVU4Hr1G072010.4	Barley	cytosol	33.93	2.33
HORVU4Hr1G071960.2	Barley	cytosol	33.93	2.33
HORVU2Hr1G011690.1	Barley	cytosol	32.14	2.18
HORVU2Hr1G104530.9	Barley	cytosol	32.14	1.97
Os08t0556550-01	Rice	cytosol	3.57	1.87
HORVU1Hr1G015310.16	Barley	cytosol, plastid	32.14	1.79
HORVU4Hr1G016200.10	Barley	cytosol, plastid	32.14	1.79
HORVU3Hr1G095530.3	Barley	mitochondrion, plastid	7.14	1.59
HORVU1Hr1G091080.1	Barley	mitochondrion, plastid	7.14	1.59
HORVU7Hr1G058410.7	Barley	cytosol, peroxisome	30.36	1.54
HORVU5Hr1G078590.8	Barley	plastid	28.57	1.42
HORVU5Hr1G069560.1	Barley	cytosol	3.57	0.94
CDY18139	Canola	extracellular, vacuole	3.57	0.66
HORVU6Hr1G053620.1	Barley	cytosol	3.57	0.56
Zm00001d033491_P001	Maize	cytosol, plasma membrane, plastid	0.0	0.0
Os08t0556400-01	Rice	endoplasmic reticulum, golgi, plasma membrane	0.0	0.0
HORVU3Hr1G029660.1	Barley	cytosol, peroxisome	0.0	0.0
CDY69655	Canola	cytosol, nucleus	0.0	0.0

Protein Annotations

EnsemblPlants:HORVU6Hr1G049800.1	EnsemblPlantsGene:HORVU6Hr1G049800	Gene3D:2.40.40.20	PANTHER:PTHR23077	PANTHER:PTHR23077:SF122	UniParc:UPI000B47D968
UniProt:A0A287U4P3	MapMan:35.2	:	:	:	:

Description

No Description!

Coordinates

chrchr6H:+:301882319..301882626

Molecular Weight (calculated)

6013.9 Da

IEP (calculated)

5.734

GRAVY (calculated)

-1.012

Length

56 amino acids

Sequence
(BLAST)

1: MATPNPPPQQ GEPSSSADPK AKKDYSTAIL ERKKSPNRLV VDEATNDDNS VVALHP

Best Arabidopsis Sequence Match ( AT3G09840.1 )
(BLAST)

001: MSTPAESSDS KSKKDFSTAI LERKKSPNRL VVDEAINDDN SVVSLHPATM EKLQLFRGDT ILIKGKKRKD TVCIALADET CEEPKIRMNK VVRSNLRVRL
101: GDVISVHQCP DVKYGKRVHI LPVDDTVEGV TGNLFDAYLK PYFLEAYRPV RKGDLFLVRG GMRSVEFKVI ETDPAEYCVV APDTEIFCEG EPVKREDEER
201: LDDVGYDDVG GVRKQMAQIR ELVELPLRHP QLFKSIGVKP PKGILLYGPP GSGKTLIARA VANETGAFFF CINGPEIMSK LAGESESNLR KAFEEAEKNA
301: PSIIFIDEID SIAPKREKTN GEVERRIVSQ LLTLMDGLKS RAHVIVMGAT NRPNSIDPAL RRFGRFDREI DIGVPDEIGR LEVLRIHTKN MKLAEDVDLE
401: RISKDTHGYV GADLAALCTE AALQCIREKM DVIDLEDDSI DAEILNSMAV TNEHFHTALG NSNPSALRET VVEVPNVSWN DIGGLENVKR ELQETVQYPV
501: EHPEKFEKFG MSPSKGVLFY GPPGCGKTLL AKAIANECQA NFISVKGPEL LTMWFGESEA NVREIFDKAR QSAPCVLFFD ELDSIATQRG GGSGGDGGGA
601: ADRVLNQLLT EMDGMNAKKT VFIIGATNRP DIIDSALLRP GRLDQLIYIP LPDEDSRLNI FKAALRKSPI AKDVDIGALA KYTQGFSGAD ITEICQRACK
701: YAIRENIEKD IEKEKRRSEN PEAMEEDGVD EVSEIKAAHF EESMKYARRS VSDADIRKYQ AFAQTLQQSR GFGSEFRFEN SAGSGATTGV ADPFATSAAA
801: AGDDDDLYN

Arabidopsis Description

CDC48AAT3G09840 protein [Source:UniProtKB/TrEMBL;Acc:B9DI55]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.