Subcellular Localization
min:
: max
Winner_takes_all: nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX88865 | Canola | cytosol, extracellular | 97.8 | 35.29 |
| CDY42324 | Canola | cytosol, extracellular | 97.8 | 30.96 |
| CDY44958 | Canola | cytosol, plasma membrane | 97.8 | 30.79 |
| CDX73571 | Canola | cytosol | 3.52 | 1.08 |
| CDX78154 | Canola | cytosol | 3.52 | 1.08 |
| CDY11249 | Canola | cytosol | 3.52 | 1.0 |
| CDY41581 | Canola | cytosol | 3.52 | 0.99 |
| CDY54618 | Canola | cytosol | 3.52 | 0.99 |
| CDX73996 | Canola | cytosol | 3.52 | 0.99 |
| CDX80862 | Canola | cytosol, plastid | 3.52 | 0.99 |
| CDY07941 | Canola | cytosol | 3.52 | 0.99 |
| CDY41316 | Canola | cytosol, extracellular | 3.52 | 0.99 |
| CDY22207 | Canola | cytosol | 3.52 | 0.99 |
| CDY13308 | Canola | cytosol | 3.52 | 0.99 |
| Os08t0556550-01 | Rice | cytosol | 0.44 | 0.93 |
| CDX67563 | Canola | cytosol | 3.52 | 0.91 |
| CDY39032 | Canola | cytosol | 0.88 | 0.8 |
| CDY25226 | Canola | cytosol | 1.32 | 0.75 |
| CDY02428 | Canola | cytosol, extracellular | 1.32 | 0.75 |
| CDY22373 | Canola | cytosol | 1.32 | 0.75 |
| CDX71534 | Canola | cytosol | 1.32 | 0.75 |
| CDY39033 | Canola | cytosol | 1.32 | 0.74 |
| CDY20371 | Canola | cytosol, plastid | 1.32 | 0.68 |
| CDX70903 | Canola | cytosol | 0.88 | 0.48 |
| CDY35832 | Canola | cytosol | 0.88 | 0.48 |
| CDY27761 | Canola | cytosol | 0.88 | 0.47 |
| CDY40714 | Canola | cytosol | 0.88 | 0.47 |
| CDY05176 | Canola | cytosol | 0.88 | 0.47 |
| CDY18801 | Canola | cytosol | 0.88 | 0.47 |
| CDY18782 | Canola | cytosol | 0.88 | 0.47 |
| CDX74142 | Canola | cytosol | 0.88 | 0.47 |
| CDX89923 | Canola | cytosol | 1.32 | 0.39 |
| CDY45794 | Canola | nucleus | 1.32 | 0.38 |
| CDY20370 | Canola | cytosol | 0.44 | 0.37 |
| CDY04161 | Canola | cytosol | 0.88 | 0.33 |
| CDY37450 | Canola | mitochondrion | 1.32 | 0.32 |
| CDY32490 | Canola | mitochondrion | 1.32 | 0.32 |
| CDX72118 | Canola | plastid | 1.32 | 0.32 |
| CDY56774 | Canola | plastid | 1.32 | 0.29 |
| CDY08201 | Canola | cytosol | 0.44 | 0.28 |
| CDY33111 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 0.88 | 0.28 |
| CDY23949 | Canola | cytosol | 0.88 | 0.28 |
| CDY59958 | Canola | cytosol | 0.44 | 0.27 |
| CDX84794 | Canola | cytosol | 0.88 | 0.27 |
| CDY32995 | Canola | cytosol, extracellular | 0.44 | 0.25 |
| CDY32714 | Canola | cytosol | 0.44 | 0.25 |
| CDY58566 | Canola | cytosol | 0.44 | 0.25 |
| CDY43865 | Canola | cytosol | 0.44 | 0.25 |
| CDX88666 | Canola | cytosol | 0.44 | 0.25 |
| CDY02806 | Canola | cytosol | 0.44 | 0.25 |
| CDX74842 | Canola | cytosol | 0.44 | 0.24 |
| CDY30665 | Canola | cytosol | 0.44 | 0.23 |
| CDY25685 | Canola | cytosol | 0.44 | 0.23 |
| CDY24076 | Canola | cytosol | 0.44 | 0.23 |
| CDY20470 | Canola | cytosol, plasma membrane | 0.44 | 0.23 |
| CDY36602 | Canola | cytosol | 0.44 | 0.23 |
| CDY02494 | Canola | cytosol | 0.44 | 0.23 |
| CDY30663 | Canola | cytosol | 0.44 | 0.23 |
| CDX69950 | Canola | cytosol | 0.88 | 0.18 |
| CDX89698 | Canola | endoplasmic reticulum | 0.44 | 0.14 |
| CDY62119 | Canola | cytosol | 0.44 | 0.09 |
| CDY02982 | Canola | cytosol | 0.44 | 0.08 |
| CDY35245 | Canola | cytosol | 0.0 | 0.0 |
| CDY25624 | Canola | cytosol | 0.0 | 0.0 |
| CDY18139 | Canola | extracellular, vacuole | 0.0 | 0.0 |
| CDY14224 | Canola | cytosol | 0.0 | 0.0 |
| CDY06847 | Canola | cytosol | 0.0 | 0.0 |
| CDX97472 | Canola | cytosol | 0.0 | 0.0 |
| CDX92914 | Canola | cytosol, extracellular | 0.0 | 0.0 |
| CDX91939 | Canola | cytosol, mitochondrion | 0.0 | 0.0 |
| HORVU3Hr1G029660.1 | Barley | cytosol, peroxisome | 0.0 | 0.0 |
| HORVU6Hr1G049800.1 | Barley | cytosol | 0.0 | 0.0 |
| Os08t0556400-01 | Rice | endoplasmic reticulum, golgi, plasma membrane | 0.0 | 0.0 |
| CDX74308 | Canola | mitochondrion | 0.0 | 0.0 |
| Zm00001d033491_P001 | Maize | cytosol, plasma membrane, plastid | 0.0 | 0.0 |
Protein Annotations
| MapMan:23.5.1.4 | Gene3D:3.40.50.300 | GO:A0A078JT86 | UniProt:A0A078JT86 | EnsemblPlants:CDY69655 | ProteinID:CDY69655 |
| ProteinID:CDY69655.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 | GO:GO:0005488 |
| GO:GO:0005525 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006810 |
| GO:GO:0006913 | GO:GO:0008150 | GO:GO:0015031 | GO:GO:0016787 | EnsemblPlantsGene:GSBRNA2T00089590001 | InterPro:IPR002041 |
| InterPro:P-loop_NTPase | PFAM:PF00071 | PRINTS:PR00627 | PFscan:PS51418 | PANTHER:PTHR24071 | PANTHER:PTHR24071:SF7 |
| InterPro:Ran_GTPase | SMART:SM00173 | SMART:SM00174 | SMART:SM00175 | SMART:SM00176 | SUPFAM:SSF52540 |
| InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase | TIGRFAMs:TIGR00231 | UniParc:UPI0004EF264E | SEG:seg | : |
Description
BnaA03g56000DGTP-binding nuclear protein [Source:UniProtKB/TrEMBL;Acc:A0A078JT86]
Coordinates
chrLK039969:+:602..1845
Molecular Weight (calculated)
25795.5 Da
IEP (calculated)
6.393
GRAVY (calculated)
-0.460
Length
227 amino acids
Sequence
(BLAST)
(BLAST)
001: SLDSDNMALP NQQTVDYPSF KLVIVGDGGT GKTTFVKRHL TGEFEKKYEP TIGVEVHPLD FFTNCGKIRF YCWDTAGQEK FGGLRDGYYI HGQCAVIMFD
101: VTARLTYKNV PTWHRDLCRV CENIPIVLCG NKVDVKNRQV KAKQVTFHRK KNLQYYEISA KSNYNFEKPF LYLARKLAGD QNLHFVESPA LAPPEVHIDV
201: AEQQRNEADL IAAAAQPLPD DDDDAFE
101: VTARLTYKNV PTWHRDLCRV CENIPIVLCG NKVDVKNRQV KAKQVTFHRK KNLQYYEISA KSNYNFEKPF LYLARKLAGD QNLHFVESPA LAPPEVHIDV
201: AEQQRNEADL IAAAAQPLPD DDDDAFE
001: MALPNQQTVD YPSFKLVIVG DGGTGKTTFV KRHLTGEFEK KYEPTIGVEV HPLDFFTNCG KIRFYCWDTA GQEKFGGLRD GYYIHGQCAI IMFDVTARLT
101: YKNVPTWHRD LCRVCENIPI VLCGNKVDVK NRQVKAKQVT FHRKKNLQYY EISAKSNYNF EKPFLYLARK LAGDQNLHFV ESPALAPPEV HLDIAAQQQN
201: EADLAAAAAQ PLPDDDDDAF E
101: YKNVPTWHRD LCRVCENIPI VLCGNKVDVK NRQVKAKQVT FHRKKNLQYY EISAKSNYNF EKPFLYLARK LAGDQNLHFV ESPALAPPEV HLDIAAQQQN
201: EADLAAAAAQ PLPDDDDDAF E
Arabidopsis Description
RAN2GTP-binding nuclear protein [Source:UniProtKB/TrEMBL;Acc:A0A178UQ77]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.