Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d018309_P003 | Maize | cytosol | 90.99 | 75.82 |
| CDY24076 | Canola | cytosol | 90.99 | 75.82 |
| CDY30665 | Canola | cytosol | 90.99 | 75.82 |
| CDY36602 | Canola | cytosol | 90.99 | 75.82 |
| EES01223 | Sorghum | cytosol | 90.99 | 75.82 |
| EES07646 | Sorghum | cytosol | 90.99 | 75.82 |
| PGSC0003DMT400023656 | Potato | cytosol | 91.27 | 75.7 |
| CDY02494 | Canola | cytosol | 90.7 | 75.59 |
| CDY25685 | Canola | cytosol | 90.7 | 75.59 |
| CDX74842 | Canola | cytosol | 87.61 | 75.49 |
| TraesCS7A01G156800.1 | Wheat | cytosol | 90.42 | 75.35 |
| TraesCS7B01G060900.1 | Wheat | golgi | 90.42 | 75.35 |
| TraesCS7D01G157200.1 | Wheat | cytosol | 90.42 | 75.35 |
| Solyc06g063140.2.1 | Tomato | cytosol, extracellular, nucleus, plastid | 90.99 | 75.29 |
| CDY20470 | Canola | cytosol, plasma membrane | 90.14 | 75.12 |
| PGSC0003DMT400012446 | Potato | cytosol | 90.7 | 75.06 |
| HORVU6Hr1G083150.1 | Barley | cytosol | 89.01 | 74.18 |
| TraesCS6B01G376500.1 | Wheat | golgi | 89.01 | 74.18 |
| TraesCS6D01G326400.1 | Wheat | cytosol | 89.01 | 74.18 |
| TraesCSU01G080700.1 | Wheat | cytosol | 89.01 | 74.18 |
| HORVU7Hr1G032070.1 | Barley | cytosol | 90.42 | 72.3 |
| Zm00001d052078_P003 | Maize | cytosol | 90.99 | 70.68 |
| KRH06953 | Soybean | cytosol | 48.73 | 64.07 |
| CDY30663 | Canola | cytosol | 76.06 | 62.5 |
| VIT_11s0016g00230.t01 | Wine grape | cytosol | 72.96 | 60.94 |
| CDY20370 | Canola | cytosol | 29.58 | 39.03 |
| CDX70903 | Canola | cytosol | 41.97 | 35.82 |
| CDY35832 | Canola | cytosol | 41.97 | 35.56 |
| CDY39032 | Canola | cytosol | 25.07 | 35.46 |
| CDY25226 | Canola | cytosol | 37.75 | 33.58 |
| CDY22373 | Canola | cytosol | 37.75 | 33.58 |
| CDY02428 | Canola | cytosol, extracellular | 37.75 | 33.58 |
| CDX71534 | Canola | cytosol | 37.75 | 33.58 |
| CDY18782 | Canola | cytosol | 39.15 | 32.78 |
| CDY18801 | Canola | cytosol | 39.15 | 32.78 |
| CDX74142 | Canola | cytosol | 39.15 | 32.78 |
| CDY05176 | Canola | cytosol | 39.15 | 32.78 |
| CDY40714 | Canola | cytosol | 39.15 | 32.78 |
| CDY27761 | Canola | cytosol | 39.15 | 32.78 |
| CDY32714 | Canola | cytosol | 34.65 | 30.45 |
| CDY32995 | Canola | cytosol, extracellular | 34.65 | 30.45 |
| CDY02806 | Canola | cytosol | 34.65 | 30.45 |
| CDY43865 | Canola | cytosol | 34.65 | 30.45 |
| CDY58566 | Canola | cytosol | 34.65 | 30.45 |
| CDX88666 | Canola | cytosol | 34.65 | 30.45 |
| CDY06847 | Canola | cytosol | 37.46 | 30.02 |
| CDX92914 | Canola | cytosol, extracellular | 37.18 | 29.8 |
| CDY35245 | Canola | cytosol | 37.18 | 29.8 |
| CDX97472 | Canola | cytosol | 37.18 | 29.66 |
| CDY14224 | Canola | cytosol | 37.18 | 29.66 |
| CDY39033 | Canola | cytosol | 33.8 | 29.56 |
| CDY59958 | Canola | cytosol | 29.86 | 29.12 |
| CDY25624 | Canola | cytosol | 18.87 | 26.69 |
| CDY20371 | Canola | cytosol, plastid | 32.96 | 26.59 |
| CDX88865 | Canola | cytosol, extracellular | 41.13 | 23.21 |
| CDY42324 | Canola | cytosol, extracellular | 42.54 | 21.06 |
| CDY44958 | Canola | cytosol, plasma membrane | 41.97 | 20.67 |
| CDY04161 | Canola | cytosol | 25.63 | 15.09 |
| CDX74308 | Canola | mitochondrion | 25.35 | 12.75 |
| CDY13308 | Canola | cytosol | 29.01 | 12.72 |
| CDY11249 | Canola | cytosol | 28.45 | 12.66 |
| CDY41581 | Canola | cytosol | 28.45 | 12.5 |
| CDY54618 | Canola | cytosol | 28.45 | 12.5 |
| CDX73996 | Canola | cytosol | 28.45 | 12.48 |
| CDY07941 | Canola | cytosol | 28.45 | 12.48 |
| CDY41316 | Canola | cytosol, extracellular | 28.45 | 12.47 |
| CDY22207 | Canola | cytosol | 28.45 | 12.47 |
| CDY33111 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 25.07 | 12.43 |
| CDX80862 | Canola | cytosol, plastid | 28.17 | 12.36 |
| CDY23949 | Canola | cytosol | 25.07 | 12.28 |
| CDX84794 | Canola | cytosol | 25.63 | 12.25 |
| CDX67563 | Canola | cytosol | 29.01 | 11.72 |
| CDX91939 | Canola | cytosol, mitochondrion | 25.63 | 11.71 |
| CDY45794 | Canola | nucleus | 25.35 | 11.29 |
| CDX78154 | Canola | cytosol | 23.1 | 11.02 |
| CDX73571 | Canola | cytosol | 22.82 | 10.9 |
| CDX89923 | Canola | cytosol | 23.38 | 10.86 |
| CDX72118 | Canola | plastid | 28.45 | 10.7 |
| CDX89698 | Canola | endoplasmic reticulum | 19.72 | 10.07 |
| CDY56774 | Canola | plastid | 28.45 | 9.92 |
| CDY37450 | Canola | mitochondrion | 24.23 | 9.3 |
| CDY32490 | Canola | mitochondrion | 24.23 | 9.28 |
| CDY02982 | Canola | cytosol | 25.35 | 7.63 |
| CDX69950 | Canola | cytosol | 22.54 | 7.33 |
| CDY62119 | Canola | cytosol | 22.25 | 7.23 |
| CDY18139 | Canola | extracellular, vacuole | 3.38 | 3.96 |
| CDY69655 | Canola | cytosol, nucleus | 0.28 | 0.44 |
Protein Annotations
| EnsemblPlants:CDY08201 | EnsemblPlantsGene:GSBRNA2T00125506001 | Gene3D:1.10.8.60 | Gene3D:2.40.50.140 | Gene3D:3.40.50.300 | GO:A0A078F4A6 |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005524 | InterPro:ATPase_AAA_core | InterPro:P-loop_NTPase |
| PANTHER:PTHR23073 | PANTHER:PTHR23073:SF60 | PFAM:PF00004 | ProteinID:CDY08201 | ProteinID:CDY08201.1 | SEG:seg |
| SUPFAM:SSF52540 | UniParc:UPI0004EEBA69 | UniProt:A0A078F4A6 | MapMan:35.1 | : | : |
Description
BnaA05g14180DBnaA05g14180D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F4A6]
Coordinates
chrLK031984:-:3315..10050
Molecular Weight (calculated)
40426.0 Da
IEP (calculated)
8.458
GRAVY (calculated)
-0.454
Length
355 amino acids
Sequence
(BLAST)
(BLAST)
001: MFEANLRSNS FKKRKKRNIT ETCSNFQCPS QWDLVSDKQM MQEEQPLQVA RCTKIISPNT EDAKYVINFV VGLGDKVSPT DIEEGMRVGV DRNKYQIQIP
101: RPPKIDPSVT MMTVEEKPDV TYNDVGGCKE QIEKMREVVE LPMLHPEKFL KLGIDPPKGL VQKYVGEGAR MVRELFQMAR SKKACIVFFD EVDAIGGARF
201: DDGVGGDNEV QRTMLEIVNQ LDGFDARGNI KVLMATNRLI GYFCSDTLDP ALLRPGRLDR KVEFGLPDLE SRTQIFKIHT RTMNCERDIR FELLARLCPN
301: STGADIRSVC TEAGMYAIRA RRKTVTEKDF LDAVNKVIKG YQKFSATPKY MPHYV
101: RPPKIDPSVT MMTVEEKPDV TYNDVGGCKE QIEKMREVVE LPMLHPEKFL KLGIDPPKGL VQKYVGEGAR MVRELFQMAR SKKACIVFFD EVDAIGGARF
201: DDGVGGDNEV QRTMLEIVNQ LDGFDARGNI KVLMATNRLI GYFCSDTLDP ALLRPGRLDR KVEFGLPDLE SRTQIFKIHT RTMNCERDIR FELLARLCPN
301: STGADIRSVC TEAGMYAIRA RRKTVTEKDF LDAVNKVIKG YQKFSATPKY MPHYV
001: MVRDIEDEIR DEKNPRPLDE DDIALLKTYG LGPYSAPIKK VEKEIKDLAK KINDLCGIKE SDTGLAPPSQ WDLVSDKQMM QEEQPLQVAR CTKIISPNTE
101: DAKYVINVKQ IAKFVVGLGD KVSPTDIEEG MRVGVDRNKY QIQIPLPPKI DPSVTMMTVE EKPDVTYNDV GGCKEQIEKM REVVELPMLH PEKFVKLGID
201: PPKGVLCYGP PGTGKTLLAR AVANRTDACF IRVIGSELVQ KYVGEGARMV RELFQMARSK KACIVFFDEV DAIGGARFDD GVGGDNEVQR TMLEIVNQLD
301: GFDARGNIKV LMATNRPDTL DPALLRPGRL DRKVEFGLPD LESRTQIFKI HTRTMNCERD IRFELLARLC PNSTGADIRS VCTEAGMYAI RARRKTVTEK
401: DFLDAVNKVI KGYQKFSATP KYMVYN
101: DAKYVINVKQ IAKFVVGLGD KVSPTDIEEG MRVGVDRNKY QIQIPLPPKI DPSVTMMTVE EKPDVTYNDV GGCKEQIEKM REVVELPMLH PEKFVKLGID
201: PPKGVLCYGP PGTGKTLLAR AVANRTDACF IRVIGSELVQ KYVGEGARMV RELFQMARSK KACIVFFDEV DAIGGARFDD GVGGDNEVQR TMLEIVNQLD
301: GFDARGNIKV LMATNRPDTL DPALLRPGRL DRKVEFGLPD LESRTQIFKI HTRTMNCERD IRFELLARLC PNSTGADIRS VCTEAGMYAI RARRKTVTEK
401: DFLDAVNKVI KGYQKFSATP KYMVYN
Arabidopsis Description
RPT1ARPT1A [Source:UniProtKB/TrEMBL;Acc:A0A178W3N8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.