Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os02t0784700-00 | Rice | cytosol | 38.52 | 55.32 |
| GSMUA_AchrUn_... | Banana | cytosol | 34.81 | 52.81 |
| CDX74842 | Canola | cytosol | 75.93 | 49.76 |
| CDY08201 | Canola | cytosol | 64.07 | 48.73 |
| KRG97280 | Soybean | cytosol, nucleus | 76.67 | 48.59 |
| KRH06311 | Soybean | cytosol | 76.67 | 48.59 |
| KRH47728 | Soybean | cytosol, nucleus | 76.67 | 48.59 |
| KRH69005 | Soybean | nucleus | 76.67 | 48.59 |
| CDY20470 | Canola | cytosol, plasma membrane | 76.67 | 48.59 |
| CDY24076 | Canola | cytosol | 76.67 | 48.59 |
| CDY30665 | Canola | cytosol | 76.67 | 48.59 |
| CDY36602 | Canola | cytosol | 76.67 | 48.59 |
| AT1G53750.1 | Thale cress | cytosol | 76.67 | 48.59 |
| CDY25685 | Canola | cytosol | 76.3 | 48.36 |
| CDY02494 | Canola | cytosol | 76.3 | 48.36 |
| Bra039688.1-P | Field mustard | cytosol | 76.3 | 48.36 |
| Bra030922.1-P | Field mustard | cytosol | 76.3 | 48.36 |
| Bra040569.1-P | Field mustard | cytosol | 76.3 | 47.58 |
| VIT_11s0016g00230.t01 | Wine grape | cytosol | 64.81 | 41.18 |
| KRG99061 | Soybean | cytosol | 22.22 | 30.0 |
| KRH46990 | Soybean | nucleus | 43.33 | 27.99 |
| KRH44668 | Soybean | cytosol, mitochondrion, nucleus | 43.33 | 27.99 |
| KRH61120 | Soybean | endoplasmic reticulum | 38.15 | 25.88 |
| KRH51796 | Soybean | cytosol | 38.15 | 25.88 |
| KRH05868 | Soybean | cytosol, nucleus | 38.15 | 25.81 |
| KRH15139 | Soybean | cytosol, endoplasmic reticulum, nucleus | 37.78 | 25.56 |
| KRG96790 | Soybean | mitochondrion | 31.11 | 25.3 |
| KRG94277 | Soybean | cytosol | 18.89 | 24.64 |
| KRH30674 | Soybean | cytosol, nucleus | 37.04 | 24.21 |
| KRG92899 | Soybean | cytosol, nucleus | 37.41 | 23.88 |
| KRH33891 | Soybean | endoplasmic reticulum, nucleus | 37.41 | 23.88 |
| KRG98107 | Soybean | cytosol | 37.04 | 23.7 |
| KRH30673 | Soybean | cytosol, nucleus | 37.04 | 23.64 |
| KRH00031 | Soybean | plastid | 29.63 | 23.19 |
| KRH32292 | Soybean | cytosol, nucleus | 37.78 | 23.02 |
| KRH19693 | Soybean | cytosol | 37.78 | 23.02 |
| KRH51488 | Soybean | mitochondrion | 35.93 | 22.93 |
| KRH67524 | Soybean | nucleus | 37.78 | 22.87 |
| KRG95799 | Soybean | cytosol, nucleus | 37.78 | 22.87 |
| KRH68501 | Soybean | nucleus | 35.93 | 22.82 |
| KRH45565 | Soybean | endoplasmic reticulum | 16.67 | 22.06 |
| KRH45638 | Soybean | cytosol | 21.11 | 17.76 |
| KRH70928 | Soybean | cytosol | 24.44 | 10.89 |
| KRH25081 | Soybean | cytosol, endoplasmic reticulum, mitochondrion | 26.3 | 9.81 |
| KRH30601 | Soybean | cytosol | 29.26 | 9.8 |
| KRH26511 | Soybean | cytosol, endoplasmic reticulum, mitochondrion, nucleus | 29.26 | 9.79 |
| KRH22853 | Soybean | cytosol, endoplasmic reticulum, mitochondrion | 29.26 | 9.79 |
| KRH67721 | Soybean | endoplasmic reticulum, nucleus | 29.26 | 9.78 |
| KRG96011 | Soybean | endoplasmic reticulum, mitochondrion, nucleus | 29.26 | 9.78 |
| KRH54357 | Soybean | cytosol, endoplasmic reticulum, mitochondrion | 29.26 | 9.71 |
| KRH63585 | Soybean | endoplasmic reticulum | 29.26 | 9.71 |
| KRH19916 | Soybean | endoplasmic reticulum, mitochondrion | 28.89 | 9.62 |
| KRH32530 | Soybean | endoplasmic reticulum, mitochondrion | 28.89 | 9.59 |
| KRH44049 | Soybean | nucleus | 27.04 | 9.23 |
| KRG96401 | Soybean | mitochondrion | 27.41 | 8.05 |
| KRH10420 | Soybean | mitochondrion | 14.44 | 7.88 |
| KRH68139 | Soybean | cytosol | 19.26 | 7.76 |
| KRH66707 | Soybean | plastid | 27.78 | 7.17 |
| KRH50491 | Soybean | cytosol | 19.63 | 4.69 |
| KRG95054 | Soybean | plastid | 5.19 | 1.82 |
Protein Annotations
| Gene3D:2.40.50.140 | Gene3D:3.40.50.300 | MapMan:35.1 | UniProt:A0A0R0FVQ4 | InterPro:AAA+_ATPase | EMBL:ACUP02009902 |
| InterPro:ATPase_AAA_core | EnsemblPlantsGene:GLYMA_16G0574001 | GO:GO:0000166 | GO:GO:0000502 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0005737 | GO:GO:0005829 | GO:GO:0005886 | GO:GO:0006139 | GO:GO:0006950 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008540 | GO:GO:0009056 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0016020 | GO:GO:0016043 | GO:GO:0016787 | GO:GO:0017025 | GO:GO:0019538 | GO:GO:0030433 |
| GO:GO:0031595 | GO:GO:0031597 | GO:GO:0036402 | GO:GO:0045899 | GO:GO:1901800 | EnsemblPlants:KRH06953 |
| ProteinID:KRH06953 | ProteinID:KRH06953.1 | InterPro:P-loop_NTPase | PFAM:PF00004 | PANTHER:PTHR23073 | PANTHER:PTHR23073:SF60 |
| SMART:SM00382 | SUPFAM:SSF52540 | UniParc:UPI0006EDE048 | : | : | : |
Description
hypothetical protein
Coordinates
chr16:+:5627763..5630701
Molecular Weight (calculated)
29706.5 Da
IEP (calculated)
6.062
GRAVY (calculated)
-0.444
Length
270 amino acids
Sequence
(BLAST)
(BLAST)
001: VDRNKYQIQI PLPPKIDPSV TMMTVEEKPD VTYNDVGGCK EQIEKMREVV ELPMLHPEKF VKLGIDPPKG VLCYSPPGTG KTLLARAVAN RTDACFIRVI
101: GSELVQKYVG EDARMVRELF QMAHSKTACI VFFDEVDAIG GARFDDGVGG DNEVQHTMLE IVNSTGADIR SVCTEAGMYA IRARRKTVTE KDFLDAVNKV
201: IKGYQKFSAT PNYSSTSQKL CGRERAGGEA AQPLPERGHE SRSHSGVQEE TVLREQAGGE EAQVPRSCQA
101: GSELVQKYVG EDARMVRELF QMAHSKTACI VFFDEVDAIG GARFDDGVGG DNEVQHTMLE IVNSTGADIR SVCTEAGMYA IRARRKTVTE KDFLDAVNKV
201: IKGYQKFSAT PNYSSTSQKL CGRERAGGEA AQPLPERGHE SRSHSGVQEE TVLREQAGGE EAQVPRSCQA
001: MVRDIEDEIR DEKNPRPLDE DDIALLKTYG LGPYSAPIKK VEKEIKDLAK KINDLCGIKE SDTGLAPPSQ WDLVSDKQMM QEEQPLQVAR CTKIISPNTE
101: DAKYVINVKQ IAKFVVGLGD KVSPTDIEEG MRVGVDRNKY QIQIPLPPKI DPSVTMMTVE EKPDVTYNDV GGCKEQIEKM REVVELPMLH PEKFVKLGID
201: PPKGVLCYGP PGTGKTLLAR AVANRTDACF IRVIGSELVQ KYVGEGARMV RELFQMARSK KACIVFFDEV DAIGGARFDD GVGGDNEVQR TMLEIVNQLD
301: GFDARGNIKV LMATNRPDTL DPALLRPGRL DRKVEFGLPD LESRTQIFKI HTRTMNCERD IRFELLARLC PNSTGADIRS VCTEAGMYAI RARRKTVTEK
401: DFLDAVNKVI KGYQKFSATP KYMVYN
101: DAKYVINVKQ IAKFVVGLGD KVSPTDIEEG MRVGVDRNKY QIQIPLPPKI DPSVTMMTVE EKPDVTYNDV GGCKEQIEKM REVVELPMLH PEKFVKLGID
201: PPKGVLCYGP PGTGKTLLAR AVANRTDACF IRVIGSELVQ KYVGEGARMV RELFQMARSK KACIVFFDEV DAIGGARFDD GVGGDNEVQR TMLEIVNQLD
301: GFDARGNIKV LMATNRPDTL DPALLRPGRL DRKVEFGLPD LESRTQIFKI HTRTMNCERD IRFELLARLC PNSTGADIRS VCTEAGMYAI RARRKTVTEK
401: DFLDAVNKVI KGYQKFSATP KYMVYN
Arabidopsis Description
RPT1ARPT1A [Source:UniProtKB/TrEMBL;Acc:A0A178W3N8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.