CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 4
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH68139	Soybean	cytosol	65.94	90.45
VIT_07s0104g01610.t01	Wine grape	cytosol	69.53	68.12
Solyc06g008730.2.1	Tomato	cytosol	65.18	64.48
PGSC0003DMT400013679	Potato	cytosol	65.18	64.41
CDX89923	Canola	cytosol	52.23	62.83
CDY37450	Canola	mitochondrion	63.0	62.59
CDY32490	Canola	mitochondrion	62.79	62.24
AT1G03000.1	Thale cress	mitochondrion	63.66	62.17
GSMUA_Achr6P20030_001	Banana	cytosol	60.72	57.76
EES12865	Sorghum	mitochondrion	53.65	53.12
TraesCS2D01G458300.3	Wheat	mitochondrion	53.21	52.41
TraesCS2A01G457600.3	Wheat	mitochondrion	52.99	52.2
TraesCS2B01G480000.3	Wheat	mitochondrion	52.88	52.09
Os04t0617600-01	Rice	cytosol	52.88	51.7
HORVU2Hr1G104530.9	Barley	cytosol	51.03	51.37
Zm00001d002462_P010	Maize	mitochondrion	51.9	44.87
KRG99061	Soybean	cytosol	9.25	42.5
KRG94277	Soybean	cytosol	8.71	38.65
Bra032565.1-P	Field mustard	mitochondrion	62.35	30.74
KRH45638	Soybean	cytosol	10.01	28.66
KRH70928	Soybean	cytosol	18.72	28.38
KRH67721	Soybean	endoplasmic reticulum, nucleus	24.7	28.09
KRG97280	Soybean	cytosol, nucleus	12.95	27.93
KRG96011	Soybean	endoplasmic reticulum, mitochondrion, nucleus	24.48	27.85
KRH22853	Soybean	cytosol, endoplasmic reticulum, mitochondrion	24.37	27.76
KRH47728	Soybean	cytosol, nucleus	12.84	27.7
KRH06311	Soybean	cytosol	12.84	27.7
KRH69005	Soybean	nucleus	12.84	27.7
KRH32530	Soybean	endoplasmic reticulum, mitochondrion	24.48	27.68
KRH19916	Soybean	endoplasmic reticulum, mitochondrion	24.37	27.62
KRH54357	Soybean	cytosol, endoplasmic reticulum, mitochondrion	24.37	27.52
KRH26511	Soybean	cytosol, endoplasmic reticulum, mitochondrion, nucleus	24.16	27.51
KRH25081	Soybean	cytosol, endoplasmic reticulum, mitochondrion	21.65	27.49
KRH30601	Soybean	cytosol	24.05	27.42
KRH06953	Soybean	cytosol	8.05	27.41
KRH63585	Soybean	endoplasmic reticulum	24.05	27.15
KRH61120	Soybean	endoplasmic reticulum	11.75	27.14
KRH51796	Soybean	cytosol	11.75	27.14
KRH45565	Soybean	endoplasmic reticulum	5.98	26.96
KRH67524	Soybean	nucleus	13.06	26.91
KRG95799	Soybean	cytosol, nucleus	13.06	26.91
KRH30674	Soybean	cytosol, nucleus	12.08	26.88
KRH46990	Soybean	nucleus	12.19	26.79
KRG92899	Soybean	cytosol, nucleus	12.3	26.71
KRH19693	Soybean	cytosol	12.84	26.64
KRH32292	Soybean	cytosol, nucleus	12.84	26.64
KRH15139	Soybean	cytosol, endoplasmic reticulum, nucleus	11.53	26.57
KRH05868	Soybean	cytosol, nucleus	11.53	26.57
KRH33891	Soybean	endoplasmic reticulum, nucleus	12.19	26.48
KRH44668	Soybean	cytosol, mitochondrion, nucleus	11.97	26.32
KRG98107	Soybean	cytosol	12.08	26.3
KRH30673	Soybean	cytosol, nucleus	12.08	26.24
KRH68501	Soybean	nucleus	11.86	25.65
KRG96790	Soybean	mitochondrion	9.03	25.0
KRH44049	Soybean	nucleus	20.67	24.02
KRH10420	Soybean	mitochondrion	12.84	23.84
KRH51488	Soybean	mitochondrion	10.88	23.64
KRH00031	Soybean	plastid	8.49	22.61
KRH66707	Soybean	plastid	23.94	21.03
KRG95054	Soybean	plastid	16.32	19.46
KRH50491	Soybean	cytosol	22.09	17.96

Protein Annotations

Gene3D:1.10.8.60	EntrezGene:100820183	MapMan:23.4.1.5.1.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	EMBL:ACUP02012154
InterPro:ATPase_AAA_CS	InterPro:ATPase_AAA_core	EnsemblPlantsGene:GLYMA_19G208300	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0005524	UniProt:I1NB32	EnsemblPlants:KRG96401	ProteinID:KRG96401	ProteinID:KRG96401.1	InterPro:P-loop_NTPase
PFAM:PF00004	ScanProsite:PS00674	PANTHER:PTHR23077	PANTHER:PTHR23077:SF9	SMART:SM00382	SUPFAM:SSF52540
UniParc:UPI00023DE4D9	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr19:+:46322251..46329237

Molecular Weight (calculated)

100237.0 Da

IEP (calculated)

6.514

GRAVY (calculated)

-0.168

Length

919 amino acids

Sequence
(BLAST)

001: MVERRRKPLI LCSTKHLINS TVPTNNLFPH ESLPTFRLPV GILRFSNPAN PSLDHSALLA LSTSLLKTLS ITSGSPVLVK NVDTNTQKIA VAIALDPPGT
101: ATNMDSPSSS NSRIMLVFPS CDFPSSGSVL DDQVAYISPL LAFNLNLHVT CLKSILHHGQ DALASYFKRG DEDATKSTVD FVINVELEPL AQPPKFASLL
201: RVSFVKIPEC GILESIRASS PVESQERQDM IDLELQKYFE VDRYLSKGDV FGIKISWNCN SPICIPCNQR SLNKNDNLVC FKVVGMEPSD EPVFRVNNTL
301: TALVLVGSSP SALPPDLLIG GQAEGPVPLQ GDTVNILASI LTPTFCPSVL SSKFRVSVLL YGLAGCGKRT VVRYVARQLG VHVVEYNCHD LMVSDRQSVA
401: LAQAFKTARR YSPAILLLRH FDVFRDSQSP EVSPHDQRGN TSEVASVIRK FTEPVNEHGD SSVPGKSNSE SVEKNAEKTS GHQVLLIAAA DSSEGLPSTI
501: RRCFSHEISM GALTEEQRAE MLFQSLQSVS GLLSNTNSEA LVKEIVGQTS GYMPRDICAL IADAGANLFP RNNAKVDKDV HDDVGSSLSS KMAEDNNHGK
601: VSPQITGKED LLNALERSKK RNASALGTPK VPNVKWEDVG GLEDVKKSIL DTVQLPLLHK DLFSSGLRKR SGVLLYGPPG TGKTLLAKAV ATECSLNFLS
701: VKGPELINMY IGESEKNVRD IFQKARSARP CVIFFDELDS LAPARGASGD SGGVMDRVVS QMLAEIDGLS DSTQDLFIIG ASNRPDLIDP ALLRPGRFDK
801: LLYVGVNSDA SYRERVLKAL TRKFKLHEDV SLYSIAKKCP PNFTGADMYA LCADAWFHAA KRKVLRANPE SSSQDNEADS VVVEYNDFIQ VLEELSPSLS
901: MAELNKYEQL RDQFEGTSK

Best Arabidopsis Sequence Match ( AT1G03000.1 )
(BLAST)

001: MVERRNPLVL SSTRSTLRSV LNSSQPSSAD GDRVLNKDGD LLRGNARLSA GILRWRKDGE NVSDAKLDSL DDSALVGLST QLLKRLSINS GSLVVVKNIE
101: IGIQRVAQVV VLDPPKTTLE DASLTQVPVS DSLHTMLVFP TYDLMGQQLL DQEVAYLSPM LAFNLSLHIS CLKSLVHRGN GVLEKYFEAK CDEEFIGKSA
201: EDGSKIGLDL EPVSQVPGYA SHLRVSFVKI PECGTIPSLK VNSSFEAEER QGLIDSALQK YFGTDRQLSR GDIFRIYIDW NCGSSICNPC SQRLCSESDD
301: YIYFKVIAME PSNERFLRVN HSQTALVLGG TVSSGLPPDL LVYRSKVPMP LQEETVNILA SVLSPPLCPS ALASKLRVAV LLHGIPGCGK RTVVKYVARR
401: LGLHVVEFSC HSLLASSERK TSTALAQTFN MARRYSPTIL LLRHFDVFKN LGSQDGSLGD RVGVSFEIAS VIRELTEPVS NGDSSMEEKS NSNFSENEVG
501: KFRGHQVLLI ASAESTEGIS PTIRRCFSHE IRMGSLNDEQ RSEMLSQSLQ GVSQFLNISS DEFMKGLVGQ TSGFLPRDLQ ALVADAGANL YISQESETKK
601: INSLSDDLHG VDIHQASQID NSTEKLTAKE DFTKALDRSK KRNASALGAP KVPNVKWDDV GGLEDVKTSI LDTVQLPLLH KDLFSSGLRK RSGVLLYGPP
701: GTGKTLLAKA VATECSLNFL SVKGPELINM YIGESEKNVR DIFEKARSAR PCVIFFDELD SLAPARGASG DSGGVMDRVV SQMLAEIDGL SDSSQDLFII
801: GASNRPDLID PALLRPGRFD KLLYVGVNAD ASYRERVLKA LTRKFKLSED VSLYSVAKKC PSTFTGADMY ALCADAWFQA AKRKVSKSDS GDMPTEEDDP
901: DSVVVEYVDF IKAMDQLSPS LSITELKKYE MLRDQFQGRS S

Arabidopsis Description

PEX6Peroxisome biogenesis protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8RY16]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.