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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 2
  • mitochondrion 4
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:cytosol, mitochondrion, plastid
BaCelLo:plastid
MultiLoc:mitochondrion
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY32490 Canola mitochondrion 95.57 95.36
CDX89923 Canola cytosol 71.89 87.04
AT1G03000.1 Thale cress mitochondrion 85.19 83.74
CDY18139 Canola extracellular, vacuole 26.81 81.85
VIT_07s0104g01610.t01 Wine grape cytosol 65.62 64.71
Solyc06g008730.2.1 Tomato cytosol 63.78 63.51
PGSC0003DMT400013679 Potato cytosol 63.57 63.23
KRG96401 Soybean mitochondrion 62.59 63.0
KRH68139 Soybean cytosol 44.86 61.94
GSMUA_Achr6P20030_001 Banana cytosol 58.81 56.31
EES12865 Sorghum mitochondrion 51.57 51.4
TraesCS2B01G480000.3 Wheat mitochondrion 51.24 50.8
TraesCS2D01G458300.3 Wheat mitochondrion 51.14 50.7
TraesCS2A01G457600.3 Wheat mitochondrion 51.03 50.59
Os04t0617600-01 Rice cytosol 51.03 50.21
HORVU2Hr1G104530.9 Barley cytosol 48.43 49.07
Zm00001d002462_P010 Maize mitochondrion 51.24 44.59
CDY25624 Canola cytosol 11.14 41.04
CDY20370 Canola cytosol 10.92 37.55
CDY39032 Canola cytosol 9.84 36.26
CDX92914 Canola cytosol, extracellular 13.95 29.12
CDX97472 Canola cytosol 13.84 28.76
CDY14224 Canola cytosol 13.84 28.76
CDY35245 Canola cytosol 13.73 28.67
CDY06847 Canola cytosol 13.73 28.67
CDY11249 Canola cytosol 24.43 28.32
CDY54618 Canola cytosol 24.65 28.22
CDY41581 Canola cytosol 24.65 28.22
CDY39033 Canola cytosol 12.32 28.08
CDX80862 Canola cytosol, plastid 24.54 28.06
CDY41316 Canola cytosol, extracellular 24.54 28.02
CDY22207 Canola cytosol 24.54 28.02
CDY07941 Canola cytosol 24.43 27.94
CDX73996 Canola cytosol 24.43 27.94
CDX70903 Canola cytosol 12.54 27.88
CDY35832 Canola cytosol 12.54 27.68
CDY02428 Canola cytosol, extracellular 11.89 27.57
CDY22373 Canola cytosol 11.89 27.57
CDY25226 Canola cytosol 11.89 27.57
CDX71534 Canola cytosol 11.89 27.57
CDY13308 Canola cytosol 24.11 27.53
CDY04161 Canola cytosol 17.95 27.53
CDX74842 Canola cytosol 12.22 27.43
CDY02494 Canola cytosol 12.54 27.23
CDY25685 Canola cytosol 12.54 27.23
CDY30665 Canola cytosol 12.43 27.0
CDY36602 Canola cytosol 12.43 27.0
CDY24076 Canola cytosol 12.43 27.0
CDY20470 Canola cytosol, plasma membrane 12.43 27.0
CDY58566 Canola cytosol 11.68 26.73
CDY32714 Canola cytosol 11.68 26.73
CDY32995 Canola cytosol, extracellular 11.68 26.73
CDY02806 Canola cytosol 11.68 26.73
CDX88666 Canola cytosol 11.68 26.73
CDY43865 Canola cytosol 11.68 26.73
CDY40714 Canola cytosol 12.22 26.65
CDY05176 Canola cytosol 12.22 26.65
CDX74142 Canola cytosol 12.22 26.65
CDY18782 Canola cytosol 12.22 26.65
CDY18801 Canola cytosol 12.22 26.65
CDY27761 Canola cytosol 12.22 26.65
CDX74308 Canola mitochondrion 20.22 26.49
CDY20371 Canola cytosol, plastid 12.43 26.14
CDX84794 Canola cytosol 20.65 25.71
CDX78154 Canola cytosol 20.54 25.54
CDY23949 Canola cytosol 20.0 25.52
CDX73571 Canola cytosol 20.43 25.44
CDX67563 Canola cytosol 24.11 25.37
CDY59958 Canola cytosol 9.95 25.27
CDX91939 Canola cytosol, mitochondrion 21.08 25.1
CDY45794 Canola nucleus 21.62 25.09
CDY30663 Canola cytosol 11.46 24.54
CDY08201 Canola cytosol 9.3 24.23
CDY33111 Canola endoplasmic reticulum, plasma membrane, vacuole 18.59 24.02
CDX72118 Canola plastid 23.46 22.99
CDY56774 Canola plastid 23.78 21.61
CDX89698 Canola endoplasmic reticulum 15.89 21.15
CDX88865 Canola cytosol, extracellular 12.65 18.6
CDY62119 Canola cytosol 20.76 17.58
CDX69950 Canola cytosol 20.76 17.58
CDY42324 Canola cytosol, extracellular 12.65 16.32
CDY44958 Canola cytosol, plasma membrane 12.54 16.09
CDY02982 Canola cytosol 19.35 15.18
CDY69655 Canola cytosol, nucleus 0.32 1.32
Protein Annotations
Gene3D:1.10.8.60MapMan:23.4.1.5.1.2Gene3D:3.40.50.300GO:A0A078HGJ0UniProt:A0A078HGJ0InterPro:AAA+_ATPase
InterPro:ATPase_AAA_CSInterPro:ATPase_AAA_coreEnsemblPlants:CDY37450ProteinID:CDY37450ProteinID:CDY37450.1GO:GO:0000166
GO:GO:0003674GO:GO:0005488GO:GO:0005524EnsemblPlantsGene:GSBRNA2T00064030001InterPro:P-loop_NTPasePFAM:PF00004
ScanProsite:PS00674PANTHER:PTHR23077PANTHER:PTHR23077:SF9SMART:SM00382SUPFAM:SSF52540UniParc:UPI0004EF0AEE
SEG:seg:::::
Description
BnaC08g45880DBnaC08g45880D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HGJ0]
Coordinates
chrLK032400:+:170913..174830
Molecular Weight (calculated)
100959.0 Da
IEP (calculated)
5.242
GRAVY (calculated)
-0.119
Length
925 amino acids
Sequence
(BLAST)
001: MVERRTPLVL SSTRATLRSV LNSIRPDEIP GRPDSIRRSV RLPAGILRWK NDSKFDSLDD SSLVGLSTQL LKRLSINSGS FVVISNIDIG IQRIAQVVVL
101: DPPPKKTLEE DASSVTSLPV SDSLHIMLVF PTFDTMSQQL LEQEVAYLSP MLAFNLSLHM SCLKSLVHRG SEVLEKYFVA KFDEESVVAG ESKIGLDLEP
201: VSEAPGYASH LRVSFVKIPE CGTIQSLVVS SSFEDEERQG LIDSALNKYF GTDRVLSRGD VFRVCIEWNC GSSICVPCSQ GLGSKEEDFI YFKVVAMEPS
301: NERFLRVNHS QTALVLGGLV SSGLPPDLLV SSSKVNMPLQ VDTVNVLASV LSPPLCPSAL SSKLRVAVLL HGLPGCGKRT VVNYVARRLG LHVVEYSCHS
401: LLASSEKQTS TALAQTFNMA RRFAPTILLL RHFEVFKNLG SQDGSQGDRV GVASEIASII KELTEPVYNG EYSSMEEESN SNSSVDKVGK FRGHQVLLIA
501: SAETTEGLSP TIRRCFSHEI RMGSLNDEQR SELLSRSLQD VSQLLNTSSD EFVKDLVGQT SGFLPRDLRA LVADAGANLF ISKESETEKI DSLSGDVDQS
601: SQLGNSSETL TAKDDFSKAL DRSKKRNASA LGAPKVPNVK WDDVGGLEDV KSSILDTVQL PLLHKDLFSS GLRKRSGVLL YGPPGTGKTL LAKAVATECS
701: LNFLSVKGPE LINMYIGESE KNVRDIFEKA RSARPCVIFF DELDSLAPAR GASGDSGGVM DRVVSQMLAE IDGLSDSSQD LFIIGASNRP DLIDPALLRP
801: GRFDKLLYVG VNADASYRER VLKALTRKFK LSEDVSLYLV AKKCPSTFTG ADMYALCADA WFQAAKRKVL NSDSGDDSIP EDDPDSVVVE FIDFIKAMDQ
901: LSPSLSVTEL KKYEALRDQF EGRSS
Best Arabidopsis Sequence Match ( AT1G03000.1 )
(BLAST)
001: MVERRNPLVL SSTRSTLRSV LNSSQPSSAD GDRVLNKDGD LLRGNARLSA GILRWRKDGE NVSDAKLDSL DDSALVGLST QLLKRLSINS GSLVVVKNIE
101: IGIQRVAQVV VLDPPKTTLE DASLTQVPVS DSLHTMLVFP TYDLMGQQLL DQEVAYLSPM LAFNLSLHIS CLKSLVHRGN GVLEKYFEAK CDEEFIGKSA
201: EDGSKIGLDL EPVSQVPGYA SHLRVSFVKI PECGTIPSLK VNSSFEAEER QGLIDSALQK YFGTDRQLSR GDIFRIYIDW NCGSSICNPC SQRLCSESDD
301: YIYFKVIAME PSNERFLRVN HSQTALVLGG TVSSGLPPDL LVYRSKVPMP LQEETVNILA SVLSPPLCPS ALASKLRVAV LLHGIPGCGK RTVVKYVARR
401: LGLHVVEFSC HSLLASSERK TSTALAQTFN MARRYSPTIL LLRHFDVFKN LGSQDGSLGD RVGVSFEIAS VIRELTEPVS NGDSSMEEKS NSNFSENEVG
501: KFRGHQVLLI ASAESTEGIS PTIRRCFSHE IRMGSLNDEQ RSEMLSQSLQ GVSQFLNISS DEFMKGLVGQ TSGFLPRDLQ ALVADAGANL YISQESETKK
601: INSLSDDLHG VDIHQASQID NSTEKLTAKE DFTKALDRSK KRNASALGAP KVPNVKWDDV GGLEDVKTSI LDTVQLPLLH KDLFSSGLRK RSGVLLYGPP
701: GTGKTLLAKA VATECSLNFL SVKGPELINM YIGESEKNVR DIFEKARSAR PCVIFFDELD SLAPARGASG DSGGVMDRVV SQMLAEIDGL SDSSQDLFII
801: GASNRPDLID PALLRPGRFD KLLYVGVNAD ASYRERVLKA LTRKFKLSED VSLYSVAKKC PSTFTGADMY ALCADAWFQA AKRKVSKSDS GDMPTEEDDP
901: DSVVVEYVDF IKAMDQLSPS LSITELKKYE MLRDQFQGRS S
Arabidopsis Description
PEX6Peroxisome biogenesis protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8RY16]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.