Skip to main content
crop-pal logo
Canola
Search for another protein from :
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • plastid 3
  • endoplasmic reticulum 3
  • extracellular 2
  • vacuole 2
  • plasma membrane 2
  • golgi 2
  • mitochondrion 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:cytosol, mitochondrion, plastid, secretory
BaCelLo:plastid
iPSORT:plastid
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY25624 Canola cytosol 23.45 64.94
CDX74308 Canola mitochondrion 63.02 62.04
CDX91939 Canola cytosol, mitochondrion 65.61 58.69
CDX84794 Canola cytosol 59.86 55.99
CDY23949 Canola cytosol 57.12 54.76
AT3G01610.2 Thale cress nucleus 65.04 54.46
CDY45794 Canola nucleus 60.86 53.07
Zm00001d009592_P001 Maize cytosol 17.41 46.18
Zm00001d035913_P002 Maize cytosol, mitochondrion 44.17 41.88
VIT_01s0010g02600.t01 Wine grape cytosol 49.21 41.45
EER87717 Sorghum cytosol 46.04 41.29
GSMUA_Achr4P03560_001 Banana mitochondrion 45.76 40.66
Zm00001d045566_P001 Maize cytosol, mitochondrion 44.6 40.36
Zm00001d027244_P001 Maize cytosol 21.15 40.16
TraesCS5D01G081900.1 Wheat mitochondrion 42.88 40.11
PGSC0003DMT400015455 Potato mitochondrion 44.03 40.1
Zm00001d022096_P002 Maize mitochondrion 43.17 39.63
Os06t0109400-01 Rice cytosol 43.88 39.61
Solyc01g068330.2.1 Tomato nucleus 46.76 39.59
PGSC0003DMT400046254 Potato cytosol 46.33 39.17
TraesCS7D01G023600.1 Wheat mitochondrion 44.03 38.98
TraesCS4A01G463300.1 Wheat mitochondrion 44.03 38.98
Zm00001d002717_P001 Maize mitochondrion 22.88 38.97
TraesCS3D01G443600.1 Wheat mitochondrion 41.73 38.77
TraesCS7A01G025800.1 Wheat mitochondrion 43.6 38.6
TraesCS3B01G487900.1 Wheat mitochondrion 41.01 38.26
HORVU7Hr1G002880.2 Barley plastid 43.88 38.08
TraesCS3A01G450800.1 Wheat mitochondrion 40.86 38.07
Zm00001d053999_P001 Maize cytosol 20.86 35.28
KRH10420 Soybean mitochondrion 23.17 32.53
CDY20370 Canola cytosol 11.51 29.74
CDY39032 Canola cytosol 9.93 27.49
CDY04161 Canola cytosol 22.88 26.37
CDY07941 Canola cytosol 29.93 25.71
CDX73996 Canola cytosol 29.93 25.71
CDY22207 Canola cytosol 29.93 25.68
CDY41316 Canola cytosol, extracellular 29.93 25.68
CDY54618 Canola cytosol 29.78 25.62
CDY41581 Canola cytosol 29.78 25.62
CDY11249 Canola cytosol 29.35 25.56
CDY13308 Canola cytosol 29.35 25.19
CDX80862 Canola cytosol, plastid 29.21 25.09
CDY22373 Canola cytosol 14.39 25.06
CDX71534 Canola cytosol 14.39 25.06
CDY02428 Canola cytosol, extracellular 14.24 24.81
CDY25226 Canola cytosol 14.24 24.81
CDX73571 Canola cytosol 25.32 23.69
CDX78154 Canola cytosol 25.18 23.52
CDX67563 Canola cytosol 29.06 22.98
CDY39033 Canola cytosol 13.24 22.66
CDY36602 Canola cytosol 13.81 22.54
CDY02494 Canola cytosol 13.81 22.54
CDY20470 Canola cytosol, plasma membrane 13.81 22.54
CDY24076 Canola cytosol 13.81 22.54
CDX74842 Canola cytosol 13.24 22.33
CDY30665 Canola cytosol 13.67 22.3
CDY25685 Canola cytosol 13.67 22.3
CDY33111 Canola endoplasmic reticulum, plasma membrane, vacuole 22.73 22.07
CDX70903 Canola cytosol 12.66 21.15
CDY35832 Canola cytosol 12.66 21.0
CDY32995 Canola cytosol, extracellular 12.09 20.79
CDY43865 Canola cytosol 12.09 20.79
CDY27761 Canola cytosol 12.66 20.75
CDY05176 Canola cytosol 12.66 20.75
CDY18782 Canola cytosol 12.66 20.75
CDY18801 Canola cytosol 12.66 20.75
CDY40714 Canola cytosol 12.66 20.75
CDX74142 Canola cytosol 12.66 20.75
CDX88666 Canola cytosol 11.94 20.54
CDY02806 Canola cytosol 11.94 20.54
CDY58566 Canola cytosol 11.94 20.54
CDY32714 Canola cytosol 11.94 20.54
CDX92914 Canola cytosol, extracellular 13.09 20.54
CDY20371 Canola cytosol, plastid 12.95 20.45
CDX97472 Canola cytosol 13.09 20.45
CDY14224 Canola cytosol 13.09 20.45
CDY35245 Canola cytosol 12.95 20.32
CDY06847 Canola cytosol 12.95 20.32
CDY08201 Canola cytosol 10.07 19.72
CDY30663 Canola cytosol 11.94 19.21
CDY59958 Canola cytosol 9.64 18.41
CDX72118 Canola plastid 24.75 18.22
CDX89923 Canola cytosol 20.0 18.19
CDY56774 Canola plastid 25.04 17.09
CDY32490 Canola mitochondrion 21.3 15.97
CDY37450 Canola mitochondrion 21.15 15.89
CDX88865 Canola cytosol, extracellular 12.66 13.99
CDY02982 Canola cytosol 23.17 13.66
CDX69950 Canola cytosol 20.29 12.91
CDY62119 Canola cytosol 20.29 12.91
CDY42324 Canola cytosol, extracellular 12.81 12.41
CDY44958 Canola cytosol, plasma membrane 12.81 12.34
CDY18139 Canola extracellular, vacuole 4.46 10.23
CDY69655 Canola cytosol, nucleus 0.14 0.44
Protein Annotations
Gene3D:1.10.8.60Gene3D:3.40.50.300MapMan:35.1GO:A0A078DRA0InterPro:AAA+_ATPaseInterPro:ATPase_AAA_CS
InterPro:ATPase_AAA_coreEnsemblPlants:CDX89698ProteinID:CDX89698ProteinID:CDX89698.1GO:GO:0000166GO:GO:0003674
GO:GO:0005488GO:GO:0005524EnsemblPlantsGene:GSBRNA2T00150101001InterPro:P-loop_NTPasePFAM:PF00004ScanProsite:PS00674
PANTHER:PTHR23077PANTHER:PTHR23077:SF55SMART:SM00382SUPFAM:SSF52540SignalP:SignalP-noTMUniParc:UPI0004EF1D60
SEG:seg:::::
Description
BnaC03g46120D
Coordinates
chrLK031860:-:895259..898237
Molecular Weight (calculated)
77002.5 Da
IEP (calculated)
8.259
GRAVY (calculated)
-0.437
Length
695 amino acids
Sequence
(BLAST)
001: MFWFMLITRI DFWILAARIY LQLRRSLIIS VPCPVNLRGN ARKYFCARSD KIRKARKSKR LKEEEEEDNS GDQGKRKKQR TNKGRSSSSS QDSGGVVSTS
101: EDAVYSEKFD LTNKSLRDHY AKRNTSSEKP IVEIETVTNK DSRKMTTTGL RKEGKVSPSV SGTTTCDVDS EAVEGNNGPT FKDFGGIKTA LDQLEIDVLT
201: KGGPVPWTTW LWKDPISATE VVSGVLGASE ENIRELFSKA YRTAPSIVFN DEIDAIGSKR ESQQREMEKR IVTQLLTGPK KNDTDSSGGH VVVIGATNRL
301: EALDAALRRS GRFDCEIALG IPDEDARAQI LSVVVQRLRL EGSFDARKIA RLTPGFVGAD LEGVANMAGR IGIKRVMDSR KSQLSRGDVV DDRSWLRQPW
401: SEEELEQLFV RMSDFEEAVK LVQGSLTREG FSTVPNVTWD HVGGLEHLRR ELNSFIVRPI KYPDTYEAFK ADLETGFLLY GPPGCGKTLI AKAVAKEAGA
501: NFIHIKVDAM TTSRGREGRF VVEGVLNQFL AELNRGENRN VYVIGVTNRP DVIDPAFLRH GRFGNLVYVP LPNADERASI LKAIGKKKPV DPSVDLDAIA
601: RINCEGFSGA DLASLVDKAI HVAIEEKFSS IESSEGDGAI DLSGDCTIKV THFQQAVTLV SPSVSKQQIK HYEELREELQ RRGLAVEGTT TNKSP
Best Arabidopsis Sequence Match ( AT3G01610.1 )
(BLAST)
001: MGRRGRGGGG GMGGGINRRY LSQVMDTCGK DLSTAEDIVD DLRSRYGNFA RLTRQVLLLN VRQVLNVRNN KRVKDEDEDD NIGDEEGSAS QRKKQRRVDE
101: KEEKLQRAEQ SHLRKRNMER SVSSSPSSSS SSEDSGDVST SEDAVYGEKL SPPRFDLIND SLRDNYAKLN SSSKKPIGSP AEKNVEVETV SNKGRSKLAT
201: MGARKEAKVS LSLSGATGNG DLEVEGTKGP TFKDFGGIKK ILDELEMNVL FPILNPEPFK KIGVKPPSGI LFHGPPGCGK TKLANAIANE AGVPFYKISA
301: TEVISGVSGA SEENIRELFS KAYRTAPSIV FIDEIDAIGS KRENQQREME KRIVTQLLTC MDGPGNKGDK NAPDSSAGFV LVIGATNRPD ALDPALRRSG
401: RFETEIALTA PDEDARAEIL SVVAQKLRLE GPFDKKRIAR LTPGFVGADL ESVAYLAGRK AIKRILDSRK SEQSGDGEDD KSWLRMPWPE EELEKLFVKM
501: SDFEEAVNLV QASLTREGFS IVPDVKWDDV GGLDHLRLQF NRYIVRPIKK PDIYKAFGVD LETGFLLYGP PGCGKTLIAK AAANEAGANF MHIKGAELLN
601: KYVGESELAI RTLFQRARTC APCVIFFDEV DALTTSRGKE GAWVVERLLN QFLVELDGGE RRNVYVIGAT NRPDVVDPAF LRPGRFGNLL YVPLPNADER
701: ASILKAIARK KPIDPSVDLD GIAKNNCEGF SGADLAHLVQ KATFQAVEEM IGSSESSEDD VTDITQCTIK TRHFEQALSL VSPSVNKQQR RHYDALSTKL
801: QESVGRNTEQ VTIGPSFTLE
Arabidopsis Description
CDC48CCell division cycle 48C [Source:UniProtKB/TrEMBL;Acc:A0A1I9LNC6]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.