Factsheet for Zm00001d027244_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d002717_P001	Maize	mitochondrion	94.26	84.56
Zm00001d053999_P001	Maize	cytosol	82.51	73.48
Zm00001d022096_P002	Maize	mitochondrion	87.98	42.54
Zm00001d009592_P001	Maize	cytosol	29.78	41.6
Zm00001d045566_P001	Maize	cytosol, mitochondrion	70.49	33.59
Zm00001d035913_P002	Maize	cytosol, mitochondrion	64.21	32.06
GSMUA_Achr4P03560_001	Banana	mitochondrion	58.74	27.49
CDX74308	Canola	mitochondrion	47.54	24.65
VIT_01s0010g02600.t01	Wine grape	cytosol	55.46	24.61
Solyc01g068330.2.1	Tomato	nucleus	53.28	23.75
PGSC0003DMT400046254	Potato	cytosol	53.01	23.6
KRH44049	Soybean	nucleus	50.82	23.51
PGSC0003DMT400015455	Potato	mitochondrion	48.09	23.07
CDX91939	Canola	cytosol, mitochondrion	48.09	22.65
CDX89698	Canola	endoplasmic reticulum	40.16	21.15
CDX84794	Canola	cytosol	42.9	21.13
Bra022833.1-P	Field mustard	cytosol	42.9	21.13
AT3G01610.2	Thale cress	nucleus	47.81	21.08
Bra000999.1-P	Field mustard	cytosol, mitochondrion	47.54	20.89
CDY23949	Canola	cytosol	40.71	20.55
CDY45794	Canola	nucleus	43.99	20.2
Zm00001d025776_P002	Maize	cytosol	26.78	17.25
Zm00001d027707_P001	Maize	cytosol, plasma membrane	32.51	14.75
Zm00001d032859_P006	Maize	plasma membrane	32.51	14.69
Zm00001d048409_P001	Maize	cytosol	32.24	14.68
Zm00001d014124_P001	Maize	cytosol, plasma membrane	32.51	14.67
Zm00001d050303_P001	Maize	cytosol	31.42	14.56
KRH10420	Soybean	mitochondrion	16.39	12.12
Zm00001d049140_P006	Maize	cytosol, plastid	25.68	9.35
Zm00001d033491_P001	Maize	cytosol, plasma membrane, plastid	4.64	6.72
Zm00001d032117_P001	Maize	cytosol	5.46	6.25
Zm00001d037481_P003	Maize	cytosol, extracellular, plasma membrane	6.83	5.81
Zm00001d002462_P010	Maize	mitochondrion	16.67	5.74
Zm00001d018409_P007	Maize	cytosol	6.56	5.36
Zm00001d049974_P004	Maize	peroxisome	15.57	5.11
Zm00001d053649_P002	Maize	cytosol, mitochondrion	5.46	5.0
Zm00001d015788_P001	Maize	plasma membrane	5.46	5.0
Zm00001d028801_P001	Maize	cytosol, extracellular	6.01	4.93
Zm00001d018309_P003	Maize	cytosol	5.74	4.93
Zm00001d022573_P001	Maize	cytosol, extracellular, plasma membrane	6.01	4.92
Zm00001d052078_P003	Maize	cytosol	6.01	4.81
Zm00001d007215_P001	Maize	cytosol	6.01	4.74
Zm00001d050616_P002	Maize	plastid	5.46	4.61
Zm00001d046539_P002	Maize	cytosol, mitochondrion	4.92	4.52
Zm00001d016439_P003	Maize	cytosol, extracellular, plasma membrane	4.64	4.03
Zm00001d053616_P002	Maize	cytosol	4.64	4.03
Zm00001d015886_P002	Maize	cytosol	5.46	3.69
CDY25624	Canola	cytosol	1.37	1.99
Zm00001d045163_P001	Maize	mitochondrion	0.0	0.0

Protein Annotations

Gene3D:1.10.8.60	Gene3D:3.40.50.300	MapMan:35.1	UniProt:A0A1D6JJB1	InterPro:AAA+_ATPase	InterPro:ATPase_AAA_CS
InterPro:ATPase_AAA_core	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	GO:GO:0008150
GO:GO:0009987	GO:GO:0051301	ProteinID:ONL92435.1	InterPro:P-loop_NTPase	PFAM:PF00004	ScanProsite:PS00674
PANTHER:PTHR23077	PANTHER:PTHR23077:SF55	SMART:SM00382	SUPFAM:SSF52540	UniParc:UPI0008DB34D2	EnsemblPlantsGene:Zm00001d027244
EnsemblPlants:Zm00001d027244_P001	EnsemblPlants:Zm00001d027244_T001	SEG:seg	:	:	:

Description

Cell division control protein 48 homolog C

Coordinates

chr1:-:217904..219526

Molecular Weight (calculated)

40822.4 Da

IEP (calculated)

8.670

GRAVY (calculated)

-0.241

Length

366 amino acids

Sequence
(BLAST)

001: MLHSQYASQT SKQNPGTNQQ LEIEMTAEKS RRLITSDCGG GGADAKPEAP VSEGVVNGDK WPRFADLGGM EQVLDQLLVE VLVPLRRLEL PNYLGVRPVA
101: GLLLYGPPGC GKTTLAHAIA NETGVPFYKI SAPDIVSRVS GFMQKTSHNA CVLAGGSEEN IRGLFQKAYR TAPSIVFIDE IDAIASKREN REMERRIVTQ
201: LMTCMDEFHQ NIGGDGSDVD SSKKKPGYVI VIGATNRPDA VDQALRRPGR FNRDIYLGVP DVNLRKQILM MLAWKLRLEG QFDFLKIARA TPGFVGADLK
301: ALVNNAGYLA MKRLINKRRA QYCSEVKVKW WKQLSWDAGE MESVHVTMND FEVYLFHIEL TIRFLF

Best Arabidopsis Sequence Match ( AT3G01610.1 )
(BLAST)

001: MGRRGRGGGG GMGGGINRRY LSQVMDTCGK DLSTAEDIVD DLRSRYGNFA RLTRQVLLLN VRQVLNVRNN KRVKDEDEDD NIGDEEGSAS QRKKQRRVDE
101: KEEKLQRAEQ SHLRKRNMER SVSSSPSSSS SSEDSGDVST SEDAVYGEKL SPPRFDLIND SLRDNYAKLN SSSKKPIGSP AEKNVEVETV SNKGRSKLAT
201: MGARKEAKVS LSLSGATGNG DLEVEGTKGP TFKDFGGIKK ILDELEMNVL FPILNPEPFK KIGVKPPSGI LFHGPPGCGK TKLANAIANE AGVPFYKISA
301: TEVISGVSGA SEENIRELFS KAYRTAPSIV FIDEIDAIGS KRENQQREME KRIVTQLLTC MDGPGNKGDK NAPDSSAGFV LVIGATNRPD ALDPALRRSG
401: RFETEIALTA PDEDARAEIL SVVAQKLRLE GPFDKKRIAR LTPGFVGADL ESVAYLAGRK AIKRILDSRK SEQSGDGEDD KSWLRMPWPE EELEKLFVKM
501: SDFEEAVNLV QASLTREGFS IVPDVKWDDV GGLDHLRLQF NRYIVRPIKK PDIYKAFGVD LETGFLLYGP PGCGKTLIAK AAANEAGANF MHIKGAELLN
601: KYVGESELAI RTLFQRARTC APCVIFFDEV DALTTSRGKE GAWVVERLLN QFLVELDGGE RRNVYVIGAT NRPDVVDPAF LRPGRFGNLL YVPLPNADER
701: ASILKAIARK KPIDPSVDLD GIAKNNCEGF SGADLAHLVQ KATFQAVEEM IGSSESSEDD VTDITQCTIK TRHFEQALSL VSPSVNKQQR RHYDALSTKL
801: QESVGRNTEQ VTIGPSFTLE

Arabidopsis Description

CDC48CCell division cycle 48C [Source:UniProtKB/TrEMBL;Acc:A0A1I9LNC6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.