Factsheet for Zm00001d049140_P006

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 3
mitochondrion 1
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d005003_P002
Zm00001d008278_P001
Zm00001d010649_P001
Zm00001d028948_P001
Zm00001d038543_P004
Zm00001d038545_P001
Zm00001d041430_P001
Zm00001d043144_P001
Zm00001d047597_P001
Zm00001d052415_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G56690.1	Zm00001d005003_P002	AT3G56800.1	11346951
AT3G56690.1	Zm00001d008278_P001	AT3G56800.1	11346951
AT3G56690.1	Zm00001d010649_P001	AT3G56800.1	11346951
AT3G56690.1	Zm00001d028948_P001	AT3G56800.1	11346951
AT3G56690.1	Zm00001d038543_P004	AT3G56800.1	11346951
AT3G56690.1	Zm00001d038545_P001	AT3G56800.1	11346951
AT3G56690.1	Zm00001d041430_P001	AT3G56800.1	11346951
AT3G56690.1	Zm00001d043144_P001	AT3G56800.1	11346951
AT3G56690.1	Zm00001d047597_P001	AT3G56800.1	11346951
AT3G56690.1	Zm00001d052415_P001	AT3G56800.1	11346951

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES09632	Sorghum	cytosol, plastid	89.65	91.19
TraesCS1B01G089700.1	Wheat	cytosol, plastid	70.45	72.17
HORVU1Hr1G015310.16	Barley	cytosol, plastid	71.24	71.24
TraesCS1A01G071300.1	Wheat	cytosol, plastid	70.75	70.75
TraesCS1D01G073600.1	Wheat	cytosol, plastid	70.75	70.75
TraesCS4B01G108300.1	Wheat	plastid	70.35	70.7
TraesCS4A01G204700.1	Wheat	cytosol, plastid	70.55	70.48
TraesCS4D01G105500.2	Wheat	cytosol, plastid	70.15	70.08
HORVU4Hr1G016200.10	Barley	cytosol, plastid	69.15	69.09
GSMUA_Achr6P29120_001	Banana	cytosol	38.71	64.83
PGSC0003DMT400018483	Potato	cytosol	22.99	56.34
CDX72118	Canola	plastid	44.48	47.35
Solyc10g078320.1.1	Tomato	nucleus	45.07	45.9
VIT_08s0040g00910.t01	Wine grape	cytosol	48.26	45.8
Bra007262.1-P	Field mustard	plastid	43.98	45.1
AT3G56690.1	Thale cress	cytosol, plastid	45.57	44.81
KRH66707	Soybean	plastid	46.57	44.74
CDY56774	Canola	plastid	45.17	44.6
KRG95054	Soybean	plastid	33.43	43.58
Zm00001d025776_P002	Maize	cytosol	21.49	38.03
Zm00001d045163_P001	Maize	mitochondrion	6.57	37.5
Zm00001d009592_P001	Maize	cytosol	9.75	37.4
Zm00001d032117_P001	Maize	cytosol	11.74	36.88
Zm00001d050303_P001	Maize	cytosol	26.87	34.18
Zm00001d032859_P006	Maize	plasma membrane	27.26	33.83
Zm00001d048409_P001	Maize	cytosol	26.97	33.71
Zm00001d027707_P001	Maize	cytosol, plasma membrane	27.06	33.71
Zm00001d014124_P001	Maize	cytosol, plasma membrane	27.16	33.66
Zm00001d035913_P002	Maize	cytosol, mitochondrion	22.59	30.97
Zm00001d018309_P003	Maize	cytosol	13.03	30.75
Zm00001d053649_P002	Maize	cytosol, mitochondrion	12.04	30.25
Zm00001d015788_P001	Maize	plasma membrane	12.04	30.25
Zm00001d045566_P001	Maize	cytosol, mitochondrion	22.99	30.08
Zm00001d046539_P002	Maize	cytosol, mitochondrion	11.64	29.4
Zm00001d022096_P002	Maize	mitochondrion	21.99	29.19
Zm00001d052078_P003	Maize	cytosol	13.13	28.88
Zm00001d037481_P003	Maize	cytosol, extracellular, plasma membrane	12.24	28.6
Zm00001d053616_P002	Maize	cytosol	11.84	28.2
Zm00001d016439_P003	Maize	cytosol, extracellular, plasma membrane	11.84	28.2
Zm00001d022573_P001	Maize	cytosol, extracellular, plasma membrane	12.54	28.19
Zm00001d028801_P001	Maize	cytosol, extracellular	12.34	27.8
Zm00001d007215_P001	Maize	cytosol	12.64	27.37
Zm00001d018409_P007	Maize	cytosol	12.14	27.23
Zm00001d002717_P001	Maize	mitochondrion	10.45	25.74
Zm00001d027244_P001	Maize	cytosol	9.35	25.68
Zm00001d050616_P002	Maize	plastid	11.04	25.58
Zm00001d053999_P001	Maize	cytosol	10.05	24.57
Zm00001d002462_P010	Maize	mitochondrion	20.0	18.91
Zm00001d049974_P004	Maize	peroxisome	19.4	17.49
Zm00001d015886_P002	Maize	cytosol	8.36	15.5
Zm00001d033491_P001	Maize	cytosol, plasma membrane, plastid	3.48	13.83

Protein Annotations

Gene3D:1.10.8.60	EntrezGene:100502003	Gene3D:3.40.50.300	MapMan:35.1	UniProt:A0A1D6PSJ1	InterPro:AAA+_ATPase
ProteinID:AQK49663.1	ProteinID:AQK49669.1	ProteinID:AQK49675.1	ProteinID:AQK49676.1	InterPro:ATPase_AAA_CS	InterPro:ATPase_AAA_core
ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005516
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0009507
GO:GO:0009535	GO:GO:0009536	GO:GO:0009579	GO:GO:0016020	InterPro:P-loop_NTPase	PFAM:PF00004
ScanProsite:PS00674	PANTHER:PTHR23077	PANTHER:PTHR23077:SF27	SMART:SM00382	SUPFAM:SSF52540	UniParc:UPI0008454F06
EnsemblPlantsGene:Zm00001d049140	EnsemblPlants:Zm00001d049140_P006	EnsemblPlants:Zm00001d049140_T006	SEG:seg	:	:

Description

Calmodulin-interacting protein 111

Coordinates

chr4:+:17525379..17534729

Molecular Weight (calculated)

109138.0 Da

IEP (calculated)

6.393

GRAVY (calculated)

-0.260

Length

1005 amino acids

Sequence
(BLAST)

0001: MPPSKGKKKN PSTSPRPSPR TPSSCPSAGS GTGDGERSVD LPSIAAAAAE QFPALVPRGG SGYFAGIVAE VAPRDGSRGG RLGRLWLSEA AMVGAGMRPG
0101: CFVSVSLISS SSDQLDGFPL INLFEECNRF FDLDLDNDLL YGEAGKNFVV ATVLPSREVP KNGIKLSWDL ACVLGHPFVG RSLFICPLCT LQAPKRSDDV
0201: HILRVMKCKN LYLSLVPPNV GSSKGIESES DYHPERSAMV METPKRGPST PLRKKESHHF ASNNGSSMCL DPTTARSALA DEKINELLHT SALWWLNGRH
0301: LLKGNFVPLS ICGKLSLFVV MGAEPDSSSQ DVLYENGNTL SNAEDSTKSQ ENPVLFLVDR TTKVHLSDSV CTKQLDSDKP GLPSEPHEYD DKRNADFNHS
0401: PTLGGLSKES ATIKGIISFS LADQIGLPRY KGILLYGPPG TGKTSLASSC AYDAGVNLFT INGPEIISHY YGESEQSLYD VFTSAKQAAP AVVSDSVTKL
0501: SDSSSLKHCM SQIFIDELDA IAPSRKDGSE ALSIRMVATL LKLMDEIGPS DRVLLIAATN RPDSIDPALR RPGRLDKEIE IGVPSPGQRM DILRHLLIGV
0601: HHSLTNEEVE SVALATHGFV GADLAAVCNE AALSALRRYI SLKENSIQQL GHPGCSFYKC NSQDTEDSSS LSSSFSKLTM SSYVACMNGG NIKSSESYDD
0701: TDEIPLYVTN KDFDKAKTKV RPSAMREVIL ELPKVRWEDV GGQCSVKEQL IEAIQLPQKC PEAFERLGIR PPRGLLMIGP PGCSKTLMAR AAASEAKLNF
0801: LAVKGPELFS KWVGDSEKAV RSLFAKARAN APAILFFDEI DGLAVTRGQE NDGTSVADRV LSQLLVEMDG LDQRVGVTVI AATNRPDKID PALLRPGRFD
0901: RVLDVQPPDE ADRADIFRIH TRSMPCSADM NLNELARLTE GYTGADIKLI CREAAVAALD ERFDIQEVAM RHFNSAIDRT KPSDVKFFQE LAKQFRRSLT
1001: SLRKQ

Best Arabidopsis Sequence Match ( AT2G03670.1 )
(BLAST)

001: MLETESSVCD NIAGNEKWRA EAEIGGNERA LQALRELIIF PFRYPLEART LGLKWPRGLL LYGPPGTGKT SLVRAVVQEC DAHLIVLSPH SVHRAHAGES
101: EKVLREAFAE ASSHAVSDKP SVIFIDEIDV LCPRRDARRE QDVRIASQLF TLMDSNKPSS SAPRVVVVAS TNRVDAIDPA LRRAGRFDAL VEVSTPNEED
201: RLKILQLYTK KVNLDPSVDL QAIAISCNGY VGADLEALCR EATISASKRS SDSLILTSQD FKIAKSVVGP SINRGITVEI PKVTWDDVGG LKDLKKKLQQ
301: AVEWPIKHSA AFVKMGISPM RGILLHGPPG CSKTTLAKAA ANAAQASFFS LSCAELFSMY VGEGEALLRN TFQRARLASP SIIFFDEADV VACKRGDESS
401: SNSSTVGERL LSTLLTEMDG LEEAKGILVL AATNRPYAID AALMRPGRFD LVLYVPPPDL EARFEILQVH TRNMTLGDDV DLRKIAEETD LFTGAELEGL
501: CRESGTVSLR ENIAATAVFN RHFQTAKSSL KPALTIEEVE TYSSFRKAAK RSDSKPIPIN KKKATSTVFG FSWQLGVLSL LLLATGNYYF NHTKHELLVA
601: SAT

Arabidopsis Description

CDC48BCell division control protein 48 homolog B [Source:UniProtKB/Swiss-Prot;Acc:Q9ZPR1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.