Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU6Hr1G087650.1 | Barley | cytosol, plasma membrane | 92.05 | 42.19 |
| VIT_14s0060g02260.t01 | Wine grape | cytosol | 92.05 | 40.0 |
| Zm00001d037481_P003 | Maize | cytosol, extracellular, plasma membrane | 95.45 | 39.07 |
| TraesCS7B01G036400.1 | Wheat | cytosol | 94.32 | 38.88 |
| KRG96790 | Soybean | mitochondrion | 72.73 | 38.55 |
| VIT_05s0020g01180.t01 | Wine grape | cytosol | 92.61 | 38.53 |
| TraesCS7D01G134800.1 | Wheat | cytosol | 93.75 | 38.46 |
| PGSC0003DMT400063574 | Potato | cytosol | 92.05 | 38.3 |
| Solyc01g099760.2.1 | Tomato | nucleus, plastid | 92.05 | 38.3 |
| KRG92899 | Soybean | cytosol, nucleus | 91.48 | 38.06 |
| KRH33891 | Soybean | endoplasmic reticulum, nucleus | 91.48 | 38.06 |
| CDY27761 | Canola | cytosol | 91.48 | 37.97 |
| Bra001152.1-P | Field mustard | cytosol | 91.48 | 37.97 |
| AT3G05530.1 | Thale cress | cytosol | 91.48 | 37.97 |
| Bra039431.1-P | Field mustard | cytosol | 91.48 | 37.97 |
| Bra040214.1-P | Field mustard | cytosol | 91.48 | 37.97 |
| CDX74142 | Canola | cytosol | 91.48 | 37.97 |
| CDY18801 | Canola | cytosol | 91.48 | 37.97 |
| CDY40714 | Canola | cytosol | 91.48 | 37.97 |
| CDY18782 | Canola | cytosol | 91.48 | 37.97 |
| CDY05176 | Canola | cytosol | 91.48 | 37.97 |
| TraesCS3B01G457100.1 | Wheat | cytosol, golgi | 92.05 | 37.33 |
| TraesCS3A01G421900.1 | Wheat | cytosol | 92.05 | 37.33 |
| TraesCS3D01G417000.1 | Wheat | cytosol | 91.48 | 37.1 |
| KRH68501 | Soybean | nucleus | 89.2 | 36.94 |
| Zm00001d018409_P007 | Maize | cytosol | 89.2 | 35.04 |
| Zm00001d018309_P003 | Maize | cytosol | 49.43 | 20.42 |
| Zm00001d028801_P001 | Maize | cytosol, extracellular | 51.7 | 20.4 |
| Zm00001d022573_P001 | Maize | cytosol, extracellular, plasma membrane | 51.7 | 20.36 |
| Zm00001d053616_P002 | Maize | cytosol | 48.3 | 20.14 |
| Zm00001d016439_P003 | Maize | cytosol, extracellular, plasma membrane | 48.3 | 20.14 |
| Zm00001d007215_P001 | Maize | cytosol | 51.7 | 19.61 |
| Zm00001d052078_P003 | Maize | cytosol | 49.43 | 19.04 |
| Zm00001d015788_P001 | Maize | plasma membrane | 42.61 | 18.75 |
| Zm00001d053649_P002 | Maize | cytosol, mitochondrion | 42.61 | 18.75 |
| Zm00001d046539_P002 | Maize | cytosol, mitochondrion | 42.05 | 18.59 |
| Zm00001d050616_P002 | Maize | plastid | 43.18 | 17.51 |
| Zm00001d015886_P002 | Maize | cytosol | 42.05 | 13.65 |
| Zm00001d009592_P001 | Maize | cytosol | 19.32 | 12.98 |
| Zm00001d032117_P001 | Maize | cytosol | 23.3 | 12.81 |
| Zm00001d025776_P002 | Maize | cytosol | 39.2 | 12.15 |
| Zm00001d048409_P001 | Maize | cytosol | 36.36 | 7.96 |
| Zm00001d014124_P001 | Maize | cytosol, plasma membrane | 36.36 | 7.89 |
| Zm00001d050303_P001 | Maize | cytosol | 35.23 | 7.85 |
| Zm00001d027707_P001 | Maize | cytosol, plasma membrane | 35.8 | 7.81 |
| Zm00001d032859_P006 | Maize | plasma membrane | 35.8 | 7.78 |
| Zm00001d035913_P002 | Maize | cytosol, mitochondrion | 32.39 | 7.78 |
| Zm00001d045566_P001 | Maize | cytosol, mitochondrion | 32.39 | 7.42 |
| Zm00001d022096_P002 | Maize | mitochondrion | 31.82 | 7.4 |
| Zm00001d049140_P006 | Maize | cytosol, plastid | 37.5 | 6.57 |
| Zm00001d002462_P010 | Maize | mitochondrion | 34.09 | 5.64 |
| Zm00001d049974_P004 | Maize | peroxisome | 31.25 | 4.93 |
| Zm00001d002717_P001 | Maize | mitochondrion | 5.68 | 2.45 |
| Zm00001d053999_P001 | Maize | cytosol | 5.68 | 2.43 |
| Zm00001d033491_P001 | Maize | cytosol, plasma membrane, plastid | 0.0 | 0.0 |
| Zm00001d027244_P001 | Maize | cytosol | 0.0 | 0.0 |
Protein Annotations
| Gene3D:1.10.8.60 | Gene3D:3.40.50.300 | MapMan:35.1 | UniProt:A0A1D6NU47 | InterPro:AAA+_ATPase | ProteinID:AQL01693.1 |
| InterPro:ATPase_AAA_core | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005524 |
| GO:GO:0006508 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008233 | GO:GO:0009056 | GO:GO:0009987 |
| GO:GO:0016787 | GO:GO:0019538 | GO:GO:0036402 | GO:GO:1901800 | InterPro:P-loop_NTPase | PFAM:PF00004 |
| InterPro:PSMC3 | PANTHER:PTHR23073 | PANTHER:PTHR23073:SF7 | SMART:SM00382 | SUPFAM:SSF52540 | UniParc:UPI000842F63A |
| EnsemblPlantsGene:Zm00001d045163 | EnsemblPlants:Zm00001d045163_P001 | EnsemblPlants:Zm00001d045163_T001 | : | : | : |
Description
26S protease regulatory subunit 6A homolog A
Coordinates
chr9:-:14786516..14794503
Molecular Weight (calculated)
19584.7 Da
IEP (calculated)
8.903
GRAVY (calculated)
-0.210
Length
176 amino acids
Sequence
(BLAST)
(BLAST)
001: MTHKDRFQKL GIRPPKGVLL YGPPGTGKTL MARACAAQTN ATFLKLAGPQ LVQMFIGDGA KLVRDAFQLA KEKAPCIIFI DEIDAIGTKR FDRYAFYDIF
101: SSCMIHSRKM NVNPDVNFEE LARSTDDFNG AQLKAVCVEA GMLALRRDAT EVTHEDFNEG IVQVQAKKKS SLNYYA
101: SSCMIHSRKM NVNPDVNFEE LARSTDDFNG AQLKAVCVEA GMLALRRDAT EVTHEDFNEG IVQVQAKKKS SLNYYA
001: MATAMAEDTS FEGDQLASMT TDDIGRASRL LANEIRILKE ESQRTNLDLE SVKEKIKENQ EKIKLNKQLP YLVGNIVEIL EMSPEDDAEE DGANIDLDSQ
101: RKGKCVVLKT STRQTIFLPV VGLVDPDTLK PGDLVGVNKD SYLILDTLPS EYDSRVKAME VDEKPTEDYN DIGGLEKQIQ ELVEAIVLPM THKEQFEKLG
201: IRPPKGVLLY GPPGTGKTLM ARACAAQTNA TFLKLAGPQL VQMFIGDGAK LVRDAFLLAK EKSPCIIFID EIDAIGTKRF DSEVSGDREV QRTMLELLNQ
301: LDGFSSDDRI KVIAATNRAD ILDPALMRSG RLDRKIEFPH PTEEARGRIL QIHSRKMNVN ADVNFEELAR STDDFNGAQL KAVCVEAGML ALRRDATEVN
401: HEDFNEGIIQ VQAKKKASLN YYA
101: RKGKCVVLKT STRQTIFLPV VGLVDPDTLK PGDLVGVNKD SYLILDTLPS EYDSRVKAME VDEKPTEDYN DIGGLEKQIQ ELVEAIVLPM THKEQFEKLG
201: IRPPKGVLLY GPPGTGKTLM ARACAAQTNA TFLKLAGPQL VQMFIGDGAK LVRDAFLLAK EKSPCIIFID EIDAIGTKRF DSEVSGDREV QRTMLELLNQ
301: LDGFSSDDRI KVIAATNRAD ILDPALMRSG RLDRKIEFPH PTEEARGRIL QIHSRKMNVN ADVNFEELAR STDDFNGAQL KAVCVEAGML ALRRDATEVN
401: HEDFNEGIIQ VQAKKKASLN YYA
Arabidopsis Description
RPT5B26S proteasome regulatory subunit 6A homolog B [Source:UniProtKB/Swiss-Prot;Acc:O04019]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.