Factsheet for TraesCS7B01G036400.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS3B01G372900.1
TraesCS5A01G206600.2
TraesCS5A01G476700.1
TraesCS5B01G204800.1
TraesCS5B01G489600.1
TraesCS5D01G212800.1
TraesCS5D01G490000.1
TraesCS6A01G311800.1
TraesCS6B01G342000.1
TraesCS6D01G291100.1
TraesCS7A01G238900.1
TraesCS7B01G103800.2
TraesCS7D01G199900.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G05530.1	TraesCS6A01G311800.1	AT1G59900.1	24846764
AT3G05530.1	TraesCS6B01G342000.1	AT1G59900.1	24846764
AT3G05530.1	TraesCS6D01G291100.1	AT1G59900.1	24846764
AT3G05530.1	TraesCS7A01G238900.1	AT1G59900.1	24846764
AT3G05530.1	TraesCS7B01G103800.2	AT1G59900.1	24846764
AT3G05530.1	TraesCS7D01G199900.1	AT1G59900.1	24846764
AT3G05530.1	TraesCS3B01G372900.1	AT3G25860.1	24846764
AT3G05530.1	TraesCS5A01G206600.2	AT3G25860.1	24846764
AT3G05530.1	TraesCS5A01G476700.1	AT3G25860.1	24846764
AT3G05530.1	TraesCS5B01G204800.1	AT3G25860.1	24846764
AT3G05530.1	TraesCS5B01G489600.1	AT3G25860.1	24846764
AT3G05530.1	TraesCS5D01G212800.1	AT3G25860.1	24846764
AT3G05530.1	TraesCS5D01G490000.1	AT3G25860.1	24846764

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G134800.1	Wheat	cytosol	96.72	96.27
Zm00001d045163_P001	Maize	mitochondrion	38.88	94.32
EER87942	Sorghum	cytosol	94.61	93.95
Os02t0803700-01	Rice	cytosol, nucleus, plastid	94.38	93.94
Os06t0173100-01	Rice	cytosol, nucleus, plasma membrane	94.15	93.71
KXG31298	Sorghum	cytosol	93.91	93.69
GSMUA_Achr9P13230_001	Banana	cytosol	88.29	93.09
GSMUA_Achr5P04520_001	Banana	cytosol	87.35	92.1
VIT_14s0060g02260.t01	Wine grape	cytosol	86.89	91.6
VIT_05s0020g01180.t01	Wine grape	cytosol	90.16	91.02
KRH33891	Soybean	endoplasmic reticulum, nucleus	89.93	90.78
TraesCS3B01G457100.1	Wheat	cytosol, golgi	92.04	90.55
KRG92899	Soybean	cytosol, nucleus	89.7	90.54
Solyc01g099760.2.1	Tomato	nucleus, plastid	88.76	89.6
PGSC0003DMT400063574	Potato	cytosol	88.76	89.6
Bra001152.1-P	Field mustard	cytosol	88.52	89.15
CDY40714	Canola	cytosol	88.52	89.15
CDY27761	Canola	cytosol	88.52	89.15
AT3G05530.1	Thale cress	cytosol	88.52	89.15
Bra039431.1-P	Field mustard	cytosol	88.52	89.15
CDX74142	Canola	cytosol	88.52	89.15
CDY05176	Canola	cytosol	88.52	89.15
CDY18801	Canola	cytosol	88.29	88.92
CDY18782	Canola	cytosol	88.29	88.92
Bra040214.1-P	Field mustard	cytosol	88.29	88.92
KRH68501	Soybean	nucleus	85.25	85.65
KRG96790	Soybean	mitochondrion	62.06	79.82
TraesCS4B01G189200.1	Wheat	cytosol	41.69	39.56
TraesCS7B01G280400.1	Wheat	cytosol, unclear	37.0	39.5
TraesCS6B01G207100.1	Wheat	cytosol	38.64	39.47
TraesCS2B01G105700.1	Wheat	cytosol	41.45	39.42
TraesCS6B01G376500.1	Wheat	golgi	39.11	39.2
TraesCS7B01G060900.1	Wheat	golgi	39.11	39.2
TraesCS7B01G254400.1	Wheat	cytosol	38.64	39.01
TraesCS6B01G188500.1	Wheat	cytosol	36.07	38.5
TraesCS2B01G100400.1	Wheat	cytosol, plastid	37.24	38.31
TraesCS2B01G499600.1	Wheat	cytosol	37.24	38.13
TraesCS7B01G468900.1	Wheat	cytosol	34.19	36.68
TraesCS2B01G493900.1	Wheat	cytosol	36.53	34.44
TraesCS2B01G494200.1	Wheat	cytosol	35.83	33.55
TraesCS2B01G373100.1	Wheat	cytosol	29.74	22.32
TraesCS1B01G235400.1	Wheat	cytosol	28.57	19.0
TraesCS3B01G171400.1	Wheat	cytosol	28.57	16.78
TraesCS3B01G172100.1	Wheat	cytosol	30.45	16.46
TraesCS3B01G154400.1	Wheat	cytosol	29.98	16.24
TraesCS1B01G419200.1	Wheat	cytosol	29.98	16.22
TraesCS1B01G259200.1	Wheat	cytosol	29.98	16.22
TraesCS3B01G171200.1	Wheat	cytosol	29.51	15.99
TraesCS3B01G172000.1	Wheat	cytosol	28.81	15.69
TraesCS1B01G235300.1	Wheat	cytosol	29.04	15.5
TraesCS1B01G192400.1	Wheat	cytosol	29.27	15.47
TraesCS1B01G235500.1	Wheat	cytosol	28.81	15.38
TraesCS4B01G268400.1	Wheat	golgi	29.04	15.25
TraesCS4B01G268200.1	Wheat	cytosol	29.04	15.18
TraesCS3B01G487900.1	Wheat	mitochondrion	26.46	15.17
TraesCS3B01G171300.1	Wheat	cytosol	23.18	13.58
TraesCS1B01G089700.1	Wheat	cytosol, plastid	29.27	12.74
TraesCS4B01G108300.1	Wheat	plastid	29.27	12.5
TraesCS5B01G323100.1	Wheat	cytosol	15.93	11.7
TraesCS2B01G480000.3	Wheat	mitochondrion	25.53	11.68
TraesCS7B01G174800.1	Wheat	cytosol	21.55	8.93
TraesCS5B01G299200.1	Wheat	mitochondrion	21.55	8.41

Protein Annotations

Gene3D:1.10.8.60	MapMan:19.2.6.2.1.5	Gene3D:2.40.50.140	InterPro:26S_Psome_P45-like	Gene3D:3.40.50.300	InterPro:AAA+_ATPase
InterPro:ATPase_AAA_CS	InterPro:ATPase_AAA_core	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0030163
GO:GO:0036402	InterPro:P-loop_NTPase	PFAM:PF00004	ScanProsite:PS00674	InterPro:PSMC3	PANTHER:PTHR23073
PANTHER:PTHR23073:SF7	SMART:SM00382	SUPFAM:SSF52540	TIGRFAMs:TIGR01242	EnsemblPlantsGene:TraesCS7B01G036400	EnsemblPlants:TraesCS7B01G036400.1
TIGR:cd00009	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr7B:+:35244451..35250471

Molecular Weight (calculated)

47273.3 Da

IEP (calculated)

4.626

GRAVY (calculated)

-0.408

Length

427 amino acids

Sequence
(BLAST)

001: MSSPAPAAAA PMAVDDAEDD QMASMSVEDV GRASRLLDNE TRVLKDELQR TNLEVETFRA KENQEKIKLN KQLPYLVGNT VEVLEINPDD EAEEDGANID
101: LDSQRKGKCV VLKTSTRQTI FLPVAGLVDP DTLKPGDLVG VNKDSYLILD TLPSDYDSRV KAMEVDEKPT EDYNDVGGLE KQIQELVEAI VLPMTHKDRF
201: QKLGIRPSKG VLLYGPPGTG KTLMARACAA QTNATFLKLA GPQLVQMFIG DGAKLVRDAF QLAKEKAPCI IFIDEIDAIG TKRFDSEVSG DREVQRTMLE
301: LLNQLDGFSS DERIKVIAAT NRADILDPAL LRSGRLDRKI EFPHPSEEAR ARILQIHSRK MNVNPDVNFE ELARSTDDFN GAQLKAVCVE AGMLALRRDA
401: TEVTHEDFNE GIIQVQAKKK SSLNYYA

Best Arabidopsis Sequence Match ( AT3G05530.1 )
(BLAST)

001: MATPMVEDTS SFEEDQLASM STEDITRATR LLDNEIRILK EDAQRTNLEC DSYKEKIKEN QEKIKLNKQL PYLVGNIVEI LEMNPEDDAE EDGANIDLDS
101: QRKGKCVVLK TSTRQTIFLP VVGLVDPDSL KPGDLVGVNK DSYLILDTLP SEYDSRVKAM EVDEKPTEDY NDIGGLEKQI QELVEAIVLP MTHKERFEKL
201: GVRPPKGVLL YGPPGTGKTL MARACAAQTN ATFLKLAGPQ LVQMFIGDGA KLVRDAFQLA KEKAPCIIFI DEIDAIGTKR FDSEVSGDRE VQRTMLELLN
301: QLDGFSSDER IKVIAATNRA DILDPALMRS GRLDRKIEFP HPTEEARARI LQIHSRKMNV HPDVNFEELA RSTDDFNGAQ LKAVCVEAGM LALRRDATEV
401: NHEDFNEGII QVQAKKKASL NYYA

Arabidopsis Description

RPT5A26S proteasome regulatory subunit 6A homolog A [Source:UniProtKB/Swiss-Prot;Acc:Q9SEI2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.