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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 7
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:mitochondrion, plastid
ChloroP:plastid
iPSORT:plastid
MultiLoc:plastid
Predotar:plastid
PProwler:plastid
TargetP:plastid
WoLF PSORT:plastid
YLoc:mitochondrion
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS3A01G143400.1
TraesCS3B01G161700.1
TraesCS3D01G144200.1
TraesCS5A01G119600.1
TraesCS5B01G116300.1
TraesCS5D01G125900.1
TraesCS5D01G126000.1
TraesCS7A01G310700.1
TraesCS7B01G210500.1
TraesCS7D01G307200.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G25860.1 TraesCS5A01G119600.1 AT1G34430.1 21798944
AT3G25860.1 TraesCS5B01G116300.1 AT1G34430.1 21798944
AT3G25860.1 TraesCS5D01G125900.1 AT1G34430.1 21798944
AT3G25860.1 TraesCS5D01G126000.1 AT1G34430.1 21798944
AT3G25860.1 TraesCS7A01G310700.1 AT1G79070.1 21798944
AT3G25860.1 TraesCS7B01G210500.1 AT1G79070.1 21798944
AT3G25860.1 TraesCS7D01G307200.1 AT1G79070.1 21798944
AT3G25860.1 TraesCS3A01G143400.1 AT3G25545.1 21798944
AT3G25860.1 TraesCS3B01G161700.1 AT3G25545.1 21798944
AT3G25860.1 TraesCS3D01G144200.1 AT3G25545.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5B01G204800.1 Wheat plastid 89.87 90.06
TraesCS5D01G212800.1 Wheat plastid 89.22 89.42
HORVU5Hr1G061140.1 Barley plastid 88.36 88.55
TraesCS3B01G372900.1 Wheat plastid 86.64 88.55
OQU89472 Sorghum plastid 73.06 73.86
Zm00001d020426_P001 Maize plastid 71.77 73.35
Os09t0408600-01 Rice plastid 75.22 69.66
GSMUA_Achr3P07350_001 Banana cytosol 57.76 65.85
TraesCS5A01G476700.1 Wheat plastid 66.81 65.4
KRH75381 Soybean plastid 58.19 63.23
Solyc05g009530.2.1 Tomato plastid 58.41 59.04
CDY39183 Canola plastid 59.05 58.05
Bra017345.1-P Field mustard plastid 59.91 58.04
CDX83563 Canola plastid 59.48 57.98
AT3G25860.1 Thale cress plastid 59.91 57.92
CDY13593 Canola plastid 59.48 57.86
Bra025167.1-P Field mustard plastid 59.48 57.86
CDY04184 Canola plastid 59.7 57.83
PGSC0003DMT400033754 Potato plastid 56.9 57.39
VIT_01s0011g03380.t01 Wine grape plastid 60.34 57.38
TraesCS5A01G119600.1 Wheat plastid 54.74 55.7
KRG90801 Soybean endoplasmic reticulum, nucleus 60.13 55.14
TraesCS7A01G305100.1 Wheat mitochondrion 24.78 26.02
TraesCS7A01G014600.4 Wheat golgi, mitochondrion 26.08 22.37
TraesCS6A01G022600.2 Wheat golgi 25.65 22.12
TraesCS4A01G481800.3 Wheat mitochondrion, unclear 25.65 22.08
TraesCS4A01G243500.1 Wheat golgi, mitochondrion, unclear 17.03 18.04
TraesCS2A01G074700.1 Wheat nucleus 19.4 17.61
TraesCS2A01G041100.1 Wheat golgi, nucleus, unclear 16.59 17.3
Protein Annotations
InterPro:2-oxoA_DH_lipoyl-BSInterPro:2-oxoacid_DH_actylTfraseGene3D:2.40.50.100Gene3D:3.30.559.10Gene3D:4.10.320.10MapMan:5.1.2.2.2
InterPro:Biotin_lipoylInterPro:CAT-like_dom_sfncoils:CoilInterPro:E3-bd_dom_sfGO:GO:0003674GO:GO:0003824
GO:GO:0008150GO:GO:0008152GO:GO:0016740GO:GO:0016746InterPro:IPR000089InterPro:IPR004167
InterPro:IPR023213InterPro:IPR036625PFAM:PF00198PFAM:PF00364PFAM:PF02817ScanProsite:PS00189
PFscan:PS50968PFscan:PS51826InterPro:PSBDPANTHER:PTHR23151PANTHER:PTHR23151:SF67SUPFAM:SSF47005
SUPFAM:SSF51230SUPFAM:SSF52777InterPro:Single_hybrid_motifEnsemblPlantsGene:TraesCS5A01G206600EnsemblPlants:TraesCS5A01G206600.2TIGR:cd06849
SEG:seg:::::
Description
No Description!
Coordinates
chr5A:-:417049303..417051620
Molecular Weight (calculated)
48731.3 Da
IEP (calculated)
10.111
GRAVY (calculated)
0.086
Length
464 amino acids
Sequence
(BLAST)
001: MASLASLSIY TVPGRAGRAE SVKAPRRRRM AVVRAKVREI FMPALSSTMT EGKIVSWTTA EGDRVSKGDP VVVVESDKAD MDVETFHDGI IAAVLVPAGG
101: TAPVGAPIAL LAESEEDVAF AQARAQALSK AQGEETPPPH AAATAPPTMA PAPATVTAPT NGIATPHAKK LAKQHRVDIS NVVGTGPNGR ITAADVEAVV
201: GIQPKPKAAP PPPPAARSAP PAGIPLVAAV RQPAVLPPVP GATVVPFTSM QSAVSRNMVE SLSVPTFRVG YAIKTDKLDA LYEKVKLKGV TKTLLLVKAA
301: GMALAQHPVV NASCRDGKSF SYNSSINIAV AVAIEGGLLT PVLEDVDKSD IYLLAQKWRA LLKKTRMKQL QPSEYSSGTF SLSNLGMFGV DRFDAILPPG
401: QGAIMAVGAS RPTVIADKNG FFSIKNEMLE MGVLFLSATI NDVEIAFYTN RRHNNVLTIM ISNI
Best Arabidopsis Sequence Match ( AT1G34430.1 )
(BLAST)
001: MSRLLQTPFL PSVSLPTKTR SSVTGFRVKP RIIPIQAKIR EIFMPALSST MTEGKIVSWV KSEGDKLNKG ESVVVVESDK ADMDVETFYD GYLAAIMVEE
101: GGVAPVGSAI ALLAETEDEI ADAKAKASGG GGGGDSKAPP ASPPTAAVEA PVSVEKKVAA APVSIKAVAA SAVHPASEGG KRIVASPYAK KLAKELKVEL
201: AGLVGSGPMG RIVAKDVEAV AAGGGVQAAV AVKEVVAAPG VELGSVVPFT TMQGAVSRNM VESLGVPTFR VGYTISTDAL DALYKKIKSK GVTMTALLAK
301: ATALALAKHP VVNSSCRDGN SFVYNSSINV AVAVAIDGGL ITPVLQNADK VDIYSLSRKW KELVDKARAK QLQPQEYNTG TFTLSNLGMF GVDRFDAILP
401: PGTGAIMAVG ASQPSVVATK DGRIGMKNQM QVNVTADHRV IYGADLAQFL QTLASIIEDP KDLTF
Arabidopsis Description
EMB3003Dihydrolipoyllysine-residue acetyltransferase component 5 of pyruvate dehydrogenase complex, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9C8P0]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.