Factsheet for TraesCS2A01G074700.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 2
mitochondrion 6

Predictors

GFP

MS/MS

Papers

nucleus: 26228564

msms PMID: 26228564 doi

E Bancel, T Bonnot, M Davanture, G Branlard, M Zivy, P Martre

Blaise Pascal University, UMR1095 Genetics, Diversity and Ecophysiology of Cereals, Avenue des Landais, F-63 170 Aubière, France., CNRS, PAPPSO, UMR 0320/8120 Génétique Quantitative et Évolution - Le Moulon, F-91190 Gif-sur-Yvette, France., INRA, UMR1095 Genetics, Diversity and Ecophysiology of Cereals, 5 chemin de Beaulieu, F-63 039 Clermont-Ferrand, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G073400.1	Wheat	mitochondrion	93.93	94.49
HORVU2Hr1G012440.1	Barley	cytosol	74.56	86.39
EES02874	Sorghum	mitochondrion	75.34	73.61
Zm00001d040670_P004	Maize	mitochondrion	73.97	72.28
VIT_05s0077g02080.t01	Wine grape	cytosol	54.79	60.48
GSMUA_Achr10P...	Banana	mitochondrion	58.12	55.93
AT3G06850.1	Thale cress	mitochondrion, plastid	51.86	54.87
CDX74077	Canola	mitochondrion, plastid	50.68	54.18
CDY08029	Canola	mitochondrion	50.68	53.4
KRH02272	Soybean	mitochondrion	53.03	52.62
PGSC0003DMT400029466	Potato	mitochondrion	51.86	52.48
Solyc01g066520.2.1	Tomato	plastid	51.27	51.88
KRH50815	Soybean	mitochondrion	52.05	51.65
Bra001220.1-P	Field mustard	mitochondrion	49.51	51.21
TraesCS7A01G305100.1	Wheat	mitochondrion	20.16	23.3
TraesCS5A01G476700.1	Wheat	plastid	21.14	22.78
TraesCS5A01G119600.1	Wheat	plastid	19.77	22.15
TraesCS6A01G022600.2	Wheat	golgi	23.09	21.93
TraesCS4A01G481800.3	Wheat	mitochondrion, unclear	21.72	20.59
TraesCS7A01G014600.4	Wheat	golgi, mitochondrion	21.72	20.52
TraesCS4A01G243500.1	Wheat	golgi, mitochondrion, unclear	17.03	19.86
TraesCS5A01G206600.2	Wheat	plastid	17.61	19.4
TraesCS2A01G041100.1	Wheat	golgi, nucleus, unclear	16.24	18.65

Protein Annotations

KEGG:00280+2.3.1.168	KEGG:00640+2.3.1.168	InterPro:2-oxoA_DH_lipoyl-BS	InterPro:2-oxoacid_DH_actylTfrase	Gene3D:2.40.50.100	Gene3D:3.30.559.10
Gene3D:4.10.320.10	MapMan:4.2.7.2.2	InterPro:BCKADH_E2	InterPro:Biotin_lipoyl	InterPro:CAT-like_dom_sf	InterPro:E3-bd_dom_sf
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005739	GO:GO:0006950	GO:GO:0007154	GO:GO:0008150	GO:GO:0008152
GO:GO:0008270	GO:GO:0009605	GO:GO:0009628	GO:GO:0009646	GO:GO:0009744	GO:GO:0009987
GO:GO:0009991	GO:GO:0016407	GO:GO:0016740	GO:GO:0016746	GO:GO:0043617	InterPro:IPR000089
InterPro:IPR004167	InterPro:IPR023213	InterPro:IPR036625	PFAM:PF00198	PFAM:PF00364	PFAM:PF02817
ScanProsite:PS00189	PFscan:PS50968	PFscan:PS51826	InterPro:PSBD	PANTHER:PTHR43178	PANTHER:PTHR43178:SF5
SUPFAM:SSF47005	SUPFAM:SSF51230	SUPFAM:SSF52777	InterPro:Single_hybrid_motif	EnsemblPlantsGene:TraesCS2A01G074700	EnsemblPlants:TraesCS2A01G074700.1
TIGR:cd06849	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr2A:+:33041660..33044647

Molecular Weight (calculated)

55326.6 Da

IEP (calculated)

7.215

GRAVY (calculated)

-0.138

Length

511 amino acids

Sequence
(BLAST)

001: MAWRRLASRS RRCPTIPAAP RPAAPRPRPP AGPAAATPPL RRLLLPLSPP GFAAAAASSP ARLLHAAAVR GGSRWLASDA SASAAREPSA ELVEVPLAQT
101: GEGIAECELL RWFVSEGDHV DEFQQLCEVQ SDKATIEITS RFKGTVHEIQ FAPGDIVKVG ETLLKMIVNG SQVVPHDSLA SSPDIPLGVD TSASPLSEGN
201: APRGSLSTPA VRHLVKQYGL NIDDIKGTGR DGRVLKEDVL NYAASKGLLQ EPPSALEENV GQVELPEGGK SLLDSHFYED KRIPLRGYQR AMVKSMSLAA
301: KVPHFHYLEE INCDALVQLK ASFQKENKDH DVKHTFLPFL IKSLSVALSK YPLLNSSFIE ETNEVTLKGF HNIGVAMATE QGLVVPSIKK VQSLSILEIT
401: KELSRLHEMA LQNRLSTNDI TGGTITLSNI GAIGGKFGSP VLNLPEVAII ALGRIQKLPR FDDEENVYPS SIINVTVGAD HRVVDGATVA RFCNEWKSLV
501: EKPELLLLHM R

Best Arabidopsis Sequence Match ( AT3G06850.2 )
(BLAST)

001: MIARRIWRSH RFLRPFSSSS VCSPPFRVPE YLSQSSSSPA SRPFFVHPPT LMKWGGGSRS WFSNEAMATD SNSGLIDVPL AQTGEGIAEC ELLKWFVKEG
101: DSVEEFQPLC EVQSDKATIE ITSRFKGKVA LISHSPGDII KVGETLVRLA VEDSQDSLLT TDSSEIVTLG GSKQGTENLL GALSTPAVRN LAKDLGIDIN
201: VITGTGKDGR VLKEDVLRFS DQKGFVTDSV SSEHAVIGGD SVSTKASSNF EDKTVPLRGF SRAMVKTMTM ATSVPHFHFV EEINCDSLVE LKQFFKENNT
301: DSTIKHTFLP TLIKSLSMAL TKYPFVNSCF NAESLEIILK GSHNIGVAMA TEHGLVVPNI KNVQSLSLLE ITKELSRLQH LAANNKLNPE DVTGGTITLS
401: NIGAIGGKFG SPLLNLPEVA IIALGRIEKV PKFSKEGTVY PASIMMVNIA ADHRVLDGAT VARFCCQWKE YVEKPELLML QMR

Arabidopsis Description

BCE2Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9M7Z1]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.