CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 9

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d040670_P004	Maize	mitochondrion	90.44	90.44
TraesCS2D01G073400.1	Wheat	mitochondrion	73.42	75.59
TraesCS2A01G074700.1	Wheat	nucleus	73.61	75.34
HORVU2Hr1G012440.1	Barley	cytosol	61.76	73.24
VIT_05s0077g02080.t01	Wine grape	cytosol	54.11	61.12
AT3G06850.1	Thale cress	mitochondrion, plastid	53.54	57.97
CDX74077	Canola	mitochondrion, plastid	52.58	57.53
CDY08029	Canola	mitochondrion	52.39	56.49
GSMUA_Achr10P...	Banana	mitochondrion	57.17	56.31
PGSC0003DMT400029466	Potato	mitochondrion	53.92	55.84
Solyc01g066520.2.1	Tomato	plastid	53.54	55.45
KRH02272	Soybean	mitochondrion	54.3	55.15
KRH50815	Soybean	mitochondrion	53.73	54.56
Bra001220.1-P	Field mustard	mitochondrion	51.05	54.05
KXG37311	Sorghum	mitochondrion	21.99	23.76
OQU89472	Sorghum	plastid	20.84	23.75
EES15031	Sorghum	plastid	20.84	22.95
EES04754	Sorghum	mitochondrion	23.14	22.45
OQU78843	Sorghum	plastid	19.5	22.27
OQU93042	Sorghum	mitochondrion	16.83	18.84

Protein Annotations

KEGG:00280+2.3.1.168	KEGG:00640+2.3.1.168	InterPro:2-oxoA_DH_lipoyl-BS	InterPro:2-oxoacid_DH_actylTfrase	Gene3D:2.40.50.100	Gene3D:3.30.559.10
Gene3D:4.10.320.10	MapMan:4.2.7.2.2	EntrezGene:8079630	InterPro:BCKADH_E2	InterPro:Biotin_lipoyl	UniProt:C5XIU9
InterPro:CAT-like_dom_sf	InterPro:E3-bd_dom_sf	EnsemblPlants:EES02874	ProteinID:EES02874	ProteinID:EES02874.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005739	GO:GO:0006950	GO:GO:0007154	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270
GO:GO:0009605	GO:GO:0009628	GO:GO:0009646	GO:GO:0009744	GO:GO:0009987	GO:GO:0009991
GO:GO:0016407	GO:GO:0016740	GO:GO:0016746	GO:GO:0043617	InterPro:IPR000089	InterPro:IPR004167
InterPro:IPR023213	InterPro:IPR036625	PFAM:PF00198	PFAM:PF00364	PFAM:PF02817	ScanProsite:PS00189
PFscan:PS50968	PFscan:PS51826	InterPro:PSBD	PANTHER:PTHR43178	PANTHER:PTHR43178:SF5	MetaCyc:PWY-5046
MetaCyc:PWY-5136	MetaCyc:PWY-6435	MetaCyc:PWY-6863	MetaCyc:PWY-6945	MetaCyc:PWY-6946	MetaCyc:PWY-6948
MetaCyc:PWY-7094	MetaCyc:PWY-7288	MetaCyc:PWY-7337	MetaCyc:PWY-7338	MetaCyc:PWY-7339	MetaCyc:PWY-7340
MetaCyc:PWY-735	MetaCyc:PWY-7606	MetaCyc:PWY-7654	MetaCyc:PWY-7726	EnsemblPlantsGene:SORBI_3003G148800	SUPFAM:SSF47005
SUPFAM:SSF51230	SUPFAM:SSF52777	unigene:Sbi.918	InterPro:Single_hybrid_motif	UniParc:UPI0001A850CA	RefSeq:XP_002457754.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:-:15620729..15625940

Molecular Weight (calculated)

56387.7 Da

IEP (calculated)

6.959

GRAVY (calculated)

-0.115

Length

523 amino acids

Sequence
(BLAST)

001: MAWARLASRS RLRPAASASA SAAVGRPPNA SPSVPPPTPP TVPAATSAPP LRHLLLLPRH RFAAAASSAS TARLLGARWP QGHGRRCFAS EASAAQAPPG
101: EASELVEVPL AQTGEGIAEC ELLRWFVAEG DQVDEFQPLC EVQSDKATIE ITSRFKGKVH QINFGPGDIV KVGETLLKMI VGDSQIVSPD NIVPSADKSN
201: GVESAVSLSE GNVPSGTLST PAVRHLAKQY GININEIVGT GKDGRVLKED VLNYAVSKGV CKEQSSALEG NIDQVELLEE GKSLLDEHVY EDKKILLRGY
301: QRSMVKSMSL AAKVPHFHYL EEINCDSLVQ LKTTFQNENK DHTIKHTFLP FLIKSLSMAL SKYPILNSSF IEETSEVVFK GSHNIGVAMA TAHGLVVPNI
401: KKVQSLSILE ITKELARLHE MASHNRLSAA DIEGGTITLS NIGAIGGKFG SPLLNLPEVA IIALGRIQKL PRFDDDENVY PSSTINVTIG ADHRVVDGAT
501: VARFCNEWKS LVEKPELLLL HMR

Best Arabidopsis Sequence Match ( AT3G06850.2 )
(BLAST)

001: MIARRIWRSH RFLRPFSSSS VCSPPFRVPE YLSQSSSSPA SRPFFVHPPT LMKWGGGSRS WFSNEAMATD SNSGLIDVPL AQTGEGIAEC ELLKWFVKEG
101: DSVEEFQPLC EVQSDKATIE ITSRFKGKVA LISHSPGDII KVGETLVRLA VEDSQDSLLT TDSSEIVTLG GSKQGTENLL GALSTPAVRN LAKDLGIDIN
201: VITGTGKDGR VLKEDVLRFS DQKGFVTDSV SSEHAVIGGD SVSTKASSNF EDKTVPLRGF SRAMVKTMTM ATSVPHFHFV EEINCDSLVE LKQFFKENNT
301: DSTIKHTFLP TLIKSLSMAL TKYPFVNSCF NAESLEIILK GSHNIGVAMA TEHGLVVPNI KNVQSLSLLE ITKELSRLQH LAANNKLNPE DVTGGTITLS
401: NIGAIGGKFG SPLLNLPEVA IIALGRIEKV PKFSKEGTVY PASIMMVNIA ADHRVLDGAT VARFCCQWKE YVEKPELLML QMR

Arabidopsis Description

BCE2Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9M7Z1]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.