Factsheet for GSMUA_Achr10P02240_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_05s0077g02080.t01	Wine grape	cytosol	53.3	61.12
HORVU2Hr1G012440.1	Barley	cytosol	49.91	60.09
TraesCS2D01G073400.1	Wheat	mitochondrion	55.93	58.46
TraesCS2A01G074700.1	Wheat	nucleus	55.93	58.12
Zm00001d040670_P004	Maize	mitochondrion	56.5	57.36
EES02874	Sorghum	mitochondrion	56.31	57.17
AT3G06850.1	Thale cress	mitochondrion, plastid	50.47	55.49
CDX74077	Canola	mitochondrion, plastid	49.72	55.23
KRH02272	Soybean	mitochondrion	53.48	55.15
KRH50815	Soybean	mitochondrion	53.11	54.76
CDY08029	Canola	mitochondrion	49.91	54.64
Solyc01g066520.2.1	Tomato	plastid	51.04	53.66
PGSC0003DMT400029466	Potato	mitochondrion	50.47	53.07
Bra001220.1-P	Field mustard	mitochondrion	47.83	51.42
GSMUA_Achr9P08540_001	Banana	cytosol	11.49	25.52
GSMUA_Achr3P07350_001	Banana	cytosol	18.83	24.57
GSMUA_AchrUn_...	Banana	mitochondrion	18.08	21.24
GSMUA_Achr3P18670_001	Banana	mitochondrion	18.08	21.24
GSMUA_AchrUn_...	Banana	mitochondrion	18.64	20.0
GSMUA_Achr9P08550_001	Banana	plastid	5.08	19.29
GSMUA_Achr9P01190_001	Banana	cytosol	17.51	18.71
GSMUA_Achr10P...	Banana	mitochondrion, vacuole	22.22	18.58
GSMUA_Achr3P17420_001	Banana	cytosol	7.91	16.87
GSMUA_Achr10P...	Banana	cytosol, mitochondrion, plastid	3.01	15.84

Protein Annotations

KEGG:00280+2.3.1.168	KEGG:00640+2.3.1.168	InterPro:2-oxoA_DH_lipoyl-BS	InterPro:2-oxoacid_DH_actylTfrase	Gene3D:2.40.50.100	Gene3D:3.30.559.10
Gene3D:4.10.320.10	MapMan:4.2.7.2.2	InterPro:BCKADH_E2	InterPro:Biotin_lipoyl	InterPro:CAT-like_dom_sf	InterPro:E3-bd_dom_sf
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005739	GO:GO:0006950	GO:GO:0007154	GO:GO:0008150	GO:GO:0008152
GO:GO:0008270	GO:GO:0009605	GO:GO:0009628	GO:GO:0009646	GO:GO:0009744	GO:GO:0009987
GO:GO:0009991	GO:GO:0016407	GO:GO:0016740	GO:GO:0016746	GO:GO:0043617	EnsemblPlantsGene:GSMUA_Achr10G02240_001
EnsemblPlants:GSMUA_Achr10P02240_001	EnsemblPlants:GSMUA_Achr10T02240_001	InterPro:IPR000089	InterPro:IPR004167	InterPro:IPR023213	InterPro:IPR036625
UniProt:M0REQ1	PFAM:PF00198	PFAM:PF00364	PFAM:PF02817	ScanProsite:PS00189	PFscan:PS50968
PFscan:PS51826	InterPro:PSBD	PANTHER:PTHR43178	PANTHER:PTHR43178:SF5	SUPFAM:SSF47005	SUPFAM:SSF51230
SUPFAM:SSF52777	InterPro:Single_hybrid_motif	UniParc:UPI000295A40F	SEG:seg	:	:

Description

Putative Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex, mitochondrial [Source:GMGC_GENE;Acc:GSMUA_Achr10G02240_001]

Coordinates

chr10:+:6604038..6641839

Molecular Weight (calculated)

58352.6 Da

IEP (calculated)

6.143

GRAVY (calculated)

-0.102

Length

531 amino acids

Sequence
(BLAST)

001: MIPRRSPNPL FLAASMRVSR LPLRRSPAGT PVYAATLQQP VPSPPLESGP SRSDLSSLLP FSPLHDGGRS FTRLSSMEGF CARFTNRRFS SQAWVDVPRG
101: EVVDVTLAQT GEGIAECELL KWFVSEGDLV EEFQRLCEVQ SDKATIEITS RFKGKVVQML YVPGDIVKVG ETLVKIVVDD AQTPFGSEDD ENMTSLDVGS
201: TGLDSQSTSR KPEASGGVLS TPAVRNLAKQ YSVDINDICG TGRNGRVLKE DVLKYAANKN ICKEGPFLLD VVDEHTEELE LLKDGKGFHV DIGDAMCYAD
301: KKIPLRGFQR SMVRSMTMAA KVPHFHYFEE VNCNALVELK AALQKENKDQ SVKLTFLPFL IKSLSMTLSK YPLLNSSFHE ESNEIIMKGC HNIGVAMATP
401: YGLVVPNIKK VQSLTILEIM KELARLQLMA LNNKLNSEDI TGGTITLSNI GAVGGMFGSP LLNLPEVAII AIGQIRKLPR FDDADNVYPA SIANVTIGAD
501: HRIVDGATVA KFCNEWKLLI EKPEFLLLDM R

Best Arabidopsis Sequence Match ( AT3G06850.2 )
(BLAST)

001: MIARRIWRSH RFLRPFSSSS VCSPPFRVPE YLSQSSSSPA SRPFFVHPPT LMKWGGGSRS WFSNEAMATD SNSGLIDVPL AQTGEGIAEC ELLKWFVKEG
101: DSVEEFQPLC EVQSDKATIE ITSRFKGKVA LISHSPGDII KVGETLVRLA VEDSQDSLLT TDSSEIVTLG GSKQGTENLL GALSTPAVRN LAKDLGIDIN
201: VITGTGKDGR VLKEDVLRFS DQKGFVTDSV SSEHAVIGGD SVSTKASSNF EDKTVPLRGF SRAMVKTMTM ATSVPHFHFV EEINCDSLVE LKQFFKENNT
301: DSTIKHTFLP TLIKSLSMAL TKYPFVNSCF NAESLEIILK GSHNIGVAMA TEHGLVVPNI KNVQSLSLLE ITKELSRLQH LAANNKLNPE DVTGGTITLS
401: NIGAIGGKFG SPLLNLPEVA IIALGRIEKV PKFSKEGTVY PASIMMVNIA ADHRVLDGAT VARFCCQWKE YVEKPELLML QMR

Arabidopsis Description

BCE2Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9M7Z1]
SUBAcon: [plastid,mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.