Factsheet for GSMUA_Achr9P08540_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P17420_001	Banana	cytosol	56.07	53.82
GSMUA_Achr3P07350_001	Banana	cytosol	77.82	45.7
PGSC0003DMT400023831	Potato	plastid	88.7	45.69
Solyc11g017250.1.1	Tomato	plastid	89.12	45.51
GSMUA_AchrUn_...	Banana	mitochondrion	30.96	14.95
GSMUA_Achr10P...	Banana	cytosol, mitochondrion, plastid	5.86	13.86
GSMUA_Achr10P...	Banana	mitochondrion, vacuole	33.47	12.6
GSMUA_Achr3P18670_001	Banana	mitochondrion	22.59	11.95
GSMUA_AchrUn_...	Banana	mitochondrion	22.59	11.95
GSMUA_Achr10P...	Banana	mitochondrion	25.52	11.49
GSMUA_Achr9P01190_001	Banana	cytosol	23.43	11.27
GSMUA_Achr9P08550_001	Banana	plastid	0.0	0.0

Protein Annotations

EnsemblPlants:GSMUA_Achr9P08540_001	EnsemblPlants:GSMUA_Achr9T08540_001	EnsemblPlantsGene:GSMUA_Achr9G08540_001	Gene3D:3.30.559.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016740	GO:GO:0016746	InterPro:2-oxoacid_DH_actylTfrase	InterPro:CAT-like_dom_sf
InterPro:IPR023213	PANTHER:PTHR23151	PANTHER:PTHR23151:SF61	PFAM:PF00198	SEG:seg	SUPFAM:SSF52777
UniParc:UPI0002958439	UniProt:M0TYL3	MapMan:5.1.2.2.2	:	:	:

Description

Putative Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex [Source:GMGC_GENE;Acc:GSMUA_Achr9G08540_001]

Coordinates

chr9:-:5471084..5474171

Molecular Weight (calculated)

25446.9 Da

IEP (calculated)

9.540

GRAVY (calculated)

0.141

Length

239 amino acids

Sequence
(BLAST)

001: MGRIVAKDAP TPLAIELGTV VSFTTMQGAV SKNMVESLSV PTFRVGYTIT TNALDDLYKK IKSKGVTMTA LLAKATAIAL TKHPVVNSSC RDGKSFTYNS
101: SINIAVAVAI DGGLITPVLQ DADKVDIYSL SRKWKELVDK ARAKQLQPHE YSTGTFTLSN LGMFGVDRFD AILPPGTGAI MAVGASQPTV VAAKDGRIGL
201: KSQMQVNVTA DHRVIYGADL AAFLQTLAKI IEEPSDLTL

Best Arabidopsis Sequence Match ( AT1G34430.1 )
(BLAST)

001: MSRLLQTPFL PSVSLPTKTR SSVTGFRVKP RIIPIQAKIR EIFMPALSST MTEGKIVSWV KSEGDKLNKG ESVVVVESDK ADMDVETFYD GYLAAIMVEE
101: GGVAPVGSAI ALLAETEDEI ADAKAKASGG GGGGDSKAPP ASPPTAAVEA PVSVEKKVAA APVSIKAVAA SAVHPASEGG KRIVASPYAK KLAKELKVEL
201: AGLVGSGPMG RIVAKDVEAV AAGGGVQAAV AVKEVVAAPG VELGSVVPFT TMQGAVSRNM VESLGVPTFR VGYTISTDAL DALYKKIKSK GVTMTALLAK
301: ATALALAKHP VVNSSCRDGN SFVYNSSINV AVAVAIDGGL ITPVLQNADK VDIYSLSRKW KELVDKARAK QLQPQEYNTG TFTLSNLGMF GVDRFDAILP
401: PGTGAIMAVG ASQPSVVATK DGRIGMKNQM QVNVTADHRV IYGADLAQFL QTLASIIEDP KDLTF

Arabidopsis Description

EMB3003Dihydrolipoyllysine-residue acetyltransferase component 5 of pyruvate dehydrogenase complex, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9C8P0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.