Factsheet for GSMUA_AchrUn_randomP15700_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 8

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG92074	Soybean	cytosol, mitochondrion	18.18	81.82
TraesCS7B01G205500.1	Wheat	mitochondrion	62.02	69.46
TraesCS7A01G305100.1	Wheat	mitochondrion	62.02	69.46
KXG37311	Sorghum	mitochondrion	64.85	66.32
Zm00001d034531_P001	Maize	mitochondrion	64.04	64.3
Os06t0499900-01	Rice	mitochondrion	62.83	64.26
CDX73652	Canola	mitochondrion	23.84	63.1
TraesCS7D01G301900.1	Wheat	golgi	63.23	59.73
HORVU7Hr1G072650.1	Barley	mitochondrion	63.23	59.73
VIT_13s0074g00150.t01	Wine grape	mitochondrion	65.86	51.26
Solyc11g007720.1.1	Tomato	nucleus, unclear	62.42	47.98
KRH34708	Soybean	mitochondrion	63.64	46.6
Bra033446.1-P	Field mustard	mitochondrion	60.2	46.49
CDX95323	Canola	mitochondrion	60.0	46.33
KRG92075	Soybean	mitochondrion	46.87	44.79
CDY23199	Canola	mitochondrion, plastid	60.2	43.25
AT3G52200.2	Thale cress	mitochondrion	61.21	42.5
Bra006910.1-P	Field mustard	mitochondrion	54.14	36.71
GSMUA_Achr9P08540_001	Banana	cytosol	14.95	30.96
GSMUA_Achr10P...	Banana	mitochondrion, vacuole	38.79	30.24
GSMUA_Achr3P07350_001	Banana	cytosol	24.24	29.48
GSMUA_Achr9P08550_001	Banana	plastid	7.88	27.86
GSMUA_Achr3P17420_001	Banana	cytosol	12.93	25.7
GSMUA_AchrUn_...	Banana	mitochondrion	22.63	24.78
GSMUA_Achr3P18670_001	Banana	mitochondrion	22.22	24.34
GSMUA_Achr10P...	Banana	cytosol, mitochondrion, plastid	4.65	22.77
GSMUA_Achr9P01190_001	Banana	cytosol	21.82	21.73
GSMUA_Achr10P...	Banana	mitochondrion	20.0	18.64

Protein Annotations

InterPro:2-oxoA_DH_lipoyl-BS	InterPro:2-oxoacid_DH_actylTfrase	MapMan:2.2.1.2	Gene3D:2.40.50.100	Gene3D:3.30.559.10	Gene3D:4.10.320.10
InterPro:Biotin_lipoyl	InterPro:CAT-like_dom_sf	InterPro:E3-bd_dom_sf	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016740	GO:GO:0016746	EnsemblPlantsGene:GSMUA_AchrUn_randomG15700_001	EnsemblPlants:GSMUA_AchrUn_randomP15700_001	EnsemblPlants:GSMUA_AchrUn_randomT15700_001
InterPro:IPR000089	InterPro:IPR004167	InterPro:IPR023213	InterPro:IPR036625	UniProt:M0U9H9	PFAM:PF00198
PFAM:PF00364	PFAM:PF02817	ScanProsite:PS00189	PFscan:PS50968	PFscan:PS51826	InterPro:PSBD
PANTHER:PTHR23151	PANTHER:PTHR23151:SF9	SUPFAM:SSF47005	SUPFAM:SSF51230	SUPFAM:SSF52777	InterPro:Single_hybrid_motif
UniParc:UPI00029514AE	SEG:seg	:	:	:	:

Description

Dihydrolipoyllysine-residue acetyltransferase component 1 of pyruvate dehydrogenase complex, mitochondrial [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG15700_001]

Coordinates

chrchrUn_random:-:74548373..74587150

Molecular Weight (calculated)

53332.4 Da

IEP (calculated)

7.372

GRAVY (calculated)

-0.058

Length

495 amino acids

Sequence
(BLAST)

001: MANFRSLLLG LSRARSASLF GIGSSKYSRN CAVSSPSGGS LYVLSKKLLV QVHLFSSAGL PSHMVLGMPA LSPTMNQGNI ARWRKNEGDK IEVGDVLCEI
101: ETDKATLEFE SLEEGFLAKI LAPEGSKDVL VGQPIAITVE NPDDVKSIPA DICKGFEAKG EESTKEWTDT AEHKVSIPKA NFSRISPSAK LLIAHHGLEP
201: SSLWASGPRG TLLKGDVLAA IKSGVQSTGA HKSDQELVAA STSTLKPTVH QLSQSAVPLH DTDTHEDFLN SQIRKVIAKR LLESKQHIPH LYLSSDVILD
301: PLLAFRKELK EQYNVKVSVN DIVIKAVALA LRNVPEVNVC WNDEKGEPAL CDSIDISVAV ATEKGLMTPI IRNADQKSLS AISLEVKELA EKARGGKLKP
401: DQYQGGTFSI SNLGMFPVDH FCAIINPPQA CILAVGQGNK VVEPVIGIDG VEKPAVITKM SLKLSADHRI FDGQLGSKFL SALASNFSDI RRLLL

Best Arabidopsis Sequence Match ( AT3G52200.1 )
(BLAST)

001: MVLPLFRRAA IARTSSLLRA RLFAPASEFH SRFSNGLYHL DDKISSSNGV RSASIDLITR MDDSSPKPIL RFGVQNFSST GPISQTVLAM PALSPTMSHG
101: NVVKWMKKEG DKVEVGDVLC EIETDKATVE FESQEEGFLA KILVTEGSKD IPVNEPIAIM VEEEDDIKNV PATIEGGRDG KEETSAHQVM KPDESTQQKS
201: SIQPDASDLP PHVVLEMPAL SPTMNQGNIA KWWKKEGDKI EVGDVIGEIE TDKATLEFES LEEGYLAKIL IPEGSKDVAV GKPIALIVED AESIEAIKSS
301: SAGSSEVDTV KEVPDSVVDK PTERKAGFTK ISPAAKLLIL EHGLEASSIE ASGPYGTLLK SDVVAAIASG KASKSSASTK KKQPSKETPS KSSSTSKPSV
401: TQSDNNYEDF PNSQIRKIIA KRLLESKQKI PHLYLQSDVV LDPLLAFRKE LQENHGVKVS VNDIVIKAVA VALRNVRQAN AFWDAEKGDI VMCDSVDISI
501: AVATEKGLMT PIIKNADQKS ISAISLEVKE LAQKARSGKL APHEFQGGTF SISNLGMYPV DNFCAIINPP QAGILAVGRG NKVVEPVIGL DGIEKPSVVT
601: KMNVTLSADH RIFDGQVGAS FMSELRSNFE DVRRLLL

Arabidopsis Description

LTA3Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex [Source:UniProtKB/TrEMBL;Acc:F4J5T2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.