CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH34708	Soybean	mitochondrion	93.63	71.75
VIT_13s0074g00150.t01	Wine grape	mitochondrion	68.73	55.97
Solyc11g007720.1.1	Tomato	nucleus, unclear	62.16	50.0
Bra033446.1-P	Field mustard	mitochondrion	58.49	47.27
CDX95323	Canola	mitochondrion	58.3	47.11
TraesCS7A01G305100.1	Wheat	mitochondrion	40.15	47.06
GSMUA_AchrUn_...	Banana	mitochondrion	44.79	46.87
TraesCS7B01G205500.1	Wheat	mitochondrion	39.77	46.61
Os06t0499900-01	Rice	mitochondrion	43.24	46.28
KXG37311	Sorghum	mitochondrion	43.05	46.07
Zm00001d034531_P001	Maize	mitochondrion	42.86	45.03
CDY23199	Canola	mitochondrion, plastid	58.3	43.83
AT3G52200.2	Thale cress	mitochondrion	58.69	42.64
TraesCS7D01G301900.1	Wheat	golgi	41.31	40.84
HORVU7Hr1G072650.1	Barley	mitochondrion	41.31	40.84
Bra006910.1-P	Field mustard	mitochondrion	52.12	36.99
KRH06095	Soybean	mitochondrion	28.76	27.24
KRH47526	Soybean	mitochondrion	28.57	27.06
KRH75381	Soybean	plastid	18.34	22.25
KRG91819	Soybean	endoplasmic reticulum, nucleus	18.53	20.65
KRH34962	Soybean	plastid	18.53	20.47
CDX73652	Canola	mitochondrion	6.95	19.25
KRH14369	Soybean	nucleus	16.99	18.97
KRH73773	Soybean	mitochondrion	16.8	18.75
KRG90801	Soybean	endoplasmic reticulum, nucleus	17.76	18.18
KRH02272	Soybean	mitochondrion	16.41	16.5
KRH50815	Soybean	mitochondrion	16.02	16.12
KRG92074	Soybean	cytosol, mitochondrion	0.0	0.0

Protein Annotations

InterPro:2-oxoA_DH_lipoyl-BS	InterPro:2-oxoacid_DH_actylTfrase	Gene3D:2.40.50.100	Gene3D:3.30.559.10	Gene3D:4.10.320.10	MapMan:50.2.3
UniProt:A0A0R0EDH2	EMBL:ACUP02012728	InterPro:Biotin_lipoyl	InterPro:CAT-like_dom_sf	InterPro:E3-bd_dom_sf	EnsemblPlantsGene:GLYMA_20G1895001
GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016740	GO:GO:0016746
InterPro:IPR000089	InterPro:IPR004167	InterPro:IPR023213	InterPro:IPR036625	EnsemblPlants:KRG92075	ProteinID:KRG92075
ProteinID:KRG92075.1	PFAM:PF00198	PFAM:PF00364	PFAM:PF02817	ScanProsite:PS00189	PFscan:PS50968
PFscan:PS51826	InterPro:PSBD	PANTHER:PTHR23151	PANTHER:PTHR23151:SF9	SUPFAM:SSF47005	SUPFAM:SSF51230
SUPFAM:SSF52777	InterPro:Single_hybrid_motif	UniParc:UPI0006EDC02C	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr20:-:42799971..42811350

Molecular Weight (calculated)

56486.0 Da

IEP (calculated)

5.228

GRAVY (calculated)

-0.358

Length

518 amino acids

Sequence
(BLAST)

001: MALSRLRHPL FSRSLLILSS PARSLSRTSY SSIFTLGGDH HNIIRPASCS RLTGIHDRSL KSKWTDVKYF SSSDSSHEVL GMPALSPTMT QGNIAKWRKK
101: EGEKIEVGDV LCEIETDKAT LEFESLEEGF LAKILVPEGS KDVPVGQPIA ITVEDENDIQ NVPASAGGET RVEEKKPTRE DVTDERKSES TSAIINASEL
201: PPHVLLEMPA LSPTMNQGNI AKWRKQEGDK IEVGDILCEI ETDKATLEFE TLEEGYLAKI LAPEGSKEVA VGHPIAITVE DASDIEAIMN SVSRSSTNQQ
301: KAPQRDTKSE AKAQKNNIIR ISPAAKLLIT EYGLDASTLN ATGPYGTLLK GDVLSAIKSG KLSPKPASSK EKVSSFQSHQ QVAASQESKS DLKLSDAYED
401: FPNSQIRKVI AKRLLDSKQN TPHLYLSSDV VLDPLLSLRK DLKEQYDVKV SVNDIIVKVV AAALRNVPEA NAYWNVETGE VVLNDSIDIC IAVATEKGLM
501: TPIIKNADQK TISAISSE

Best Arabidopsis Sequence Match ( AT3G52200.1 )
(BLAST)

001: MVLPLFRRAA IARTSSLLRA RLFAPASEFH SRFSNGLYHL DDKISSSNGV RSASIDLITR MDDSSPKPIL RFGVQNFSST GPISQTVLAM PALSPTMSHG
101: NVVKWMKKEG DKVEVGDVLC EIETDKATVE FESQEEGFLA KILVTEGSKD IPVNEPIAIM VEEEDDIKNV PATIEGGRDG KEETSAHQVM KPDESTQQKS
201: SIQPDASDLP PHVVLEMPAL SPTMNQGNIA KWWKKEGDKI EVGDVIGEIE TDKATLEFES LEEGYLAKIL IPEGSKDVAV GKPIALIVED AESIEAIKSS
301: SAGSSEVDTV KEVPDSVVDK PTERKAGFTK ISPAAKLLIL EHGLEASSIE ASGPYGTLLK SDVVAAIASG KASKSSASTK KKQPSKETPS KSSSTSKPSV
401: TQSDNNYEDF PNSQIRKIIA KRLLESKQKI PHLYLQSDVV LDPLLAFRKE LQENHGVKVS VNDIVIKAVA VALRNVRQAN AFWDAEKGDI VMCDSVDISI
501: AVATEKGLMT PIIKNADQKS ISAISLEVKE LAQKARSGKL APHEFQGGTF SISNLGMYPV DNFCAIINPP QAGILAVGRG NKVVEPVIGL DGIEKPSVVT
601: KMNVTLSADH RIFDGQVGAS FMSELRSNFE DVRRLLL

Arabidopsis Description

LTA3Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex [Source:UniProtKB/TrEMBL;Acc:F4J5T2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.