CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, mitochondrion

Predictor Summary:

cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion
Any Predictor:	cytosol, mitochondrion
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX73652	Canola	mitochondrion	75.45	44.38
TraesCS7B01G205500.1	Wheat	mitochondrion	76.36	19.0
TraesCS7A01G305100.1	Wheat	mitochondrion	76.36	19.0
GSMUA_AchrUn_...	Banana	mitochondrion	81.82	18.18
KXG37311	Sorghum	mitochondrion	78.18	17.77
Zm00001d034531_P001	Maize	mitochondrion	77.27	17.24
Os06t0499900-01	Rice	mitochondrion	75.45	17.15
TraesCS7D01G301900.1	Wheat	golgi	77.27	16.22
HORVU7Hr1G072650.1	Barley	mitochondrion	77.27	16.22
VIT_13s0074g00150.t01	Wine grape	mitochondrion	87.27	15.09
Solyc11g007720.1.1	Tomato	nucleus, unclear	84.55	14.44
KRH34708	Soybean	mitochondrion	88.18	14.35
CDX95323	Canola	mitochondrion	78.18	13.42
Bra033446.1-P	Field mustard	mitochondrion	78.18	13.42
AT3G52200.2	Thale cress	mitochondrion	80.91	12.48
CDY23199	Canola	mitochondrion, plastid	78.18	12.48
Bra006910.1-P	Field mustard	mitochondrion	74.55	11.23
KRH06095	Soybean	mitochondrion	48.18	9.69
KRH47526	Soybean	mitochondrion	48.18	9.69
KRG91819	Soybean	endoplasmic reticulum, nucleus	38.18	9.03
KRH34962	Soybean	plastid	38.18	8.96
KRG90801	Soybean	endoplasmic reticulum, nucleus	40.0	8.7
KRH75381	Soybean	plastid	30.0	7.73
KRH14369	Soybean	nucleus	31.82	7.54
KRH73773	Soybean	mitochondrion	31.82	7.54
KRH02272	Soybean	mitochondrion	28.18	6.02
KRH50815	Soybean	mitochondrion	27.27	5.83
KRG92075	Soybean	mitochondrion	0.0	0.0

Protein Annotations

InterPro:2-oxoacid_DH_actylTfrase	Gene3D:3.30.559.10	MapMan:50.2.3	UniProt:A0A0R0EPQ2	EMBL:ACUP02012727	InterPro:CAT-like_dom_sf
EnsemblPlantsGene:GLYMA_20G1895002	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016740
GO:GO:0016746	InterPro:IPR023213	EnsemblPlants:KRG92074	ProteinID:KRG92074	ProteinID:KRG92074.1	PFAM:PF00198
PANTHER:PTHR23151	PANTHER:PTHR23151:SF9	SUPFAM:SSF52777	UniParc:UPI0006EDF38D	:	:

Description

hypothetical protein

Coordinates

chr20:-:42796128..42798469

Molecular Weight (calculated)

11677.3 Da

IEP (calculated)

10.263

GRAVY (calculated)

0.166

Length

110 amino acids

Sequence
(BLAST)

001: VKELAAKARA GKLKPHEFQG GTFSISNLGM FPVDKFCAII NPPQACILAV GRGNKVVEPV IGTDGIEKPS IATKLSLTLS ADHRVFDGKV GGAFLSALQS
101: NFSDIRRLLL

Best Arabidopsis Sequence Match ( AT3G52200.1 )
(BLAST)

001: MVLPLFRRAA IARTSSLLRA RLFAPASEFH SRFSNGLYHL DDKISSSNGV RSASIDLITR MDDSSPKPIL RFGVQNFSST GPISQTVLAM PALSPTMSHG
101: NVVKWMKKEG DKVEVGDVLC EIETDKATVE FESQEEGFLA KILVTEGSKD IPVNEPIAIM VEEEDDIKNV PATIEGGRDG KEETSAHQVM KPDESTQQKS
201: SIQPDASDLP PHVVLEMPAL SPTMNQGNIA KWWKKEGDKI EVGDVIGEIE TDKATLEFES LEEGYLAKIL IPEGSKDVAV GKPIALIVED AESIEAIKSS
301: SAGSSEVDTV KEVPDSVVDK PTERKAGFTK ISPAAKLLIL EHGLEASSIE ASGPYGTLLK SDVVAAIASG KASKSSASTK KKQPSKETPS KSSSTSKPSV
401: TQSDNNYEDF PNSQIRKIIA KRLLESKQKI PHLYLQSDVV LDPLLAFRKE LQENHGVKVS VNDIVIKAVA VALRNVRQAN AFWDAEKGDI VMCDSVDISI
501: AVATEKGLMT PIIKNADQKS ISAISLEVKE LAQKARSGKL APHEFQGGTF SISNLGMYPV DNFCAIINPP QAGILAVGRG NKVVEPVIGL DGIEKPSVVT
601: KMNVTLSADH RIFDGQVGAS FMSELRSNFE DVRRLLL

Arabidopsis Description

LTA3Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex [Source:UniProtKB/TrEMBL;Acc:F4J5T2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.