Factsheet for Os06t0499900-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 7
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
EpiLoc:	mitochondrion
iPSORT:	secretory
MultiLoc:	mitochondrion
Plant-mPloc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

mitochondrion: 19010998
mitochondrion: 23027867

msms PMID: 23027867 doi

G Liu, H Tian, YQ Huang, J Hu, YX Ji, SQ Li, YQ Feng, L Guo, YG Zhu

State Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan 430072, China.

msms PMID: 19010998 doi

S Huang, NL Taylor, R Narsai, H Eubel, J Whelan, AH Millar

Australian Research Council Centre of Excellence in Plant Energy Biology, M316, University of Western Australia, Crawley, 6009 Western Australia, Australia.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG37311	Sorghum	mitochondrion	83.68	83.68
Zm00001d034531_P001	Maize	mitochondrion	84.09	82.56
TraesCS7A01G305100.1	Wheat	mitochondrion	75.0	82.13
TraesCS7B01G205500.1	Wheat	mitochondrion	74.79	81.9
KRG92074	Soybean	cytosol, mitochondrion	17.15	75.45
TraesCS7D01G301900.1	Wheat	golgi	78.31	72.33
HORVU7Hr1G072650.1	Barley	mitochondrion	77.89	71.95
GSMUA_AchrUn_...	Banana	mitochondrion	64.26	62.83
CDX73652	Canola	mitochondrion	23.55	60.96
VIT_13s0074g00150.t01	Wine grape	mitochondrion	68.18	51.89
Solyc11g007720.1.1	Tomato	nucleus, unclear	63.43	47.67
Bra033446.1-P	Field mustard	mitochondrion	60.95	46.02
CDX95323	Canola	mitochondrion	60.95	46.02
KRH34708	Soybean	mitochondrion	62.19	44.53
KRG92075	Soybean	mitochondrion	46.28	43.24
CDY23199	Canola	mitochondrion, plastid	61.16	42.96
AT3G52200.2	Thale cress	mitochondrion	60.95	41.37
Bra006910.1-P	Field mustard	mitochondrion	54.34	36.03
Os07t0410100-01	Rice	mitochondrion	38.22	34.2
Os06t0105400-02	Rice	mitochondrion	38.02	33.45
Os02t0105200-01	Rice	mitochondrion	37.81	33.39
Os04t0394200-01	Rice	mitochondrion	25.21	27.73
Os02t0514700-00	Rice	mitochondrion	22.73	27.64
Os08t0431300-01	Rice	plastid	25.83	26.32
Os12t0182200-01	Rice	plastid	25.0	25.91
Os09t0408600-01	Rice	plastid	25.41	24.55
Os01t0314100-01	Rice	mitochondrion	23.35	21.61
Os01t0314000-01	Rice	cytosol	0.83	0.75

Protein Annotations

KEGG:00010+2.3.1.12	KEGG:00020+2.3.1.12	KEGG:00620+2.3.1.12	InterPro:2-oxoA_DH_lipoyl-BS	InterPro:2-oxoacid_DH_actylTfrase	MapMan:2.2.1.2
Gene3D:2.40.50.100	Gene3D:3.30.559.10	Gene3D:4.10.320.10	EntrezGene:4341113	EMBL:AK072554	ProteinID:BAD45370.1
ProteinID:BAD45742.1	ProteinID:BAF19619.1	ProteinID:BAS97922.1	InterPro:Biotin_lipoyl	InterPro:CAT-like_dom_sf	InterPro:E3-bd_dom_sf
GO:GO:0003674	GO:GO:0003824	GO:GO:0004742	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005739	GO:GO:0005759	GO:GO:0006090	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016740	GO:GO:0016746	GO:GO:0045254	InterPro:IPR000089	InterPro:IPR004167
InterPro:IPR023213	InterPro:IPR036625	InterPro:LAT1	EnsemblPlantsGene:Os06g0499900	EnsemblPlants:Os06t0499900-01	PFAM:PF00198
PFAM:PF00364	PFAM:PF02817	ScanProsite:PS00189	PFscan:PS50968	PFscan:PS51826	InterPro:PSBD
PANTHER:PTHR23151	PANTHER:PTHR23151:SF9	UniProt:Q654L9	SUPFAM:SSF47005	SUPFAM:SSF51230	SUPFAM:SSF52777
InterPro:Single_hybrid_motif	TIGRFAMs:TIGR01349	UniParc:UPI000043A284	RefSeq:XP_015643505.1	SEG:seg	:

Description

Similar to Dihydrolipoamide acetyltransferase (E2) subunit of PDC (Fragment). (Os06t0499900-01)

Coordinates

chr6:-:17597802..17609666

Molecular Weight (calculated)

52386.8 Da

IEP (calculated)

6.955

GRAVY (calculated)

-0.207

Length

484 amino acids

Sequence
(BLAST)

001: MANIRALLIG LVRARGSLVD IGRCVSSSRP SYLASLGRHY KVPMEIRWLS STGFPPHLVV GMPALSPTMN QGNIAKWRKQ EGEKIEVGDV ICEIETDKAT
101: LEFESLEEGY LAKILAPEGS KDVQVGQPIA VTVEDLEDIK NIPADASFGG EQKEQSIASE AQKVETDAAK ESSIITRISP AAKLLIKEHR LDQSVLNASG
201: PRGTLLKGDV LAALKLGASS SSTKQKNAPA APSSQPTHDF QAQSVTIPQQ NDAYEDIPNS QIRKVIAKRL LESKQTTPHL YLSQDVILDP LLAFRNELKE
301: QHGVKVSVND IVIKAVALAL RNVPEANAYW NNDKEQAQKC VSVDISIAVA TEKGLMTPII RNADQKTISA ISSEVKQLAE KARAGKLAPN EFQGGTFSIS
401: NLGMYPVDHF CAIINPPQSG ILAVGRGNKI IEPVVDSDGT EKATVVTKMS LTLSADHRVF DGQVGGKFFT ELSQNFGDIR RLLL

Best Arabidopsis Sequence Match ( AT3G52200.1 )
(BLAST)

001: MVLPLFRRAA IARTSSLLRA RLFAPASEFH SRFSNGLYHL DDKISSSNGV RSASIDLITR MDDSSPKPIL RFGVQNFSST GPISQTVLAM PALSPTMSHG
101: NVVKWMKKEG DKVEVGDVLC EIETDKATVE FESQEEGFLA KILVTEGSKD IPVNEPIAIM VEEEDDIKNV PATIEGGRDG KEETSAHQVM KPDESTQQKS
201: SIQPDASDLP PHVVLEMPAL SPTMNQGNIA KWWKKEGDKI EVGDVIGEIE TDKATLEFES LEEGYLAKIL IPEGSKDVAV GKPIALIVED AESIEAIKSS
301: SAGSSEVDTV KEVPDSVVDK PTERKAGFTK ISPAAKLLIL EHGLEASSIE ASGPYGTLLK SDVVAAIASG KASKSSASTK KKQPSKETPS KSSSTSKPSV
401: TQSDNNYEDF PNSQIRKIIA KRLLESKQKI PHLYLQSDVV LDPLLAFRKE LQENHGVKVS VNDIVIKAVA VALRNVRQAN AFWDAEKGDI VMCDSVDISI
501: AVATEKGLMT PIIKNADQKS ISAISLEVKE LAQKARSGKL APHEFQGGTF SISNLGMYPV DNFCAIINPP QAGILAVGRG NKVVEPVIGL DGIEKPSVVT
601: KMNVTLSADH RIFDGQVGAS FMSELRSNFE DVRRLLL

Arabidopsis Description

LTA3Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex [Source:UniProtKB/TrEMBL;Acc:F4J5T2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.