Factsheet for Os01t0314000-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Os02t0708400-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G26910.1	Os02t0708400-01	AT3G27960.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os01t0314100-01	Rice	mitochondrion	1.32	1.34
Solyc12g005080.1.1	Tomato	nucleus	0.75	1.08
VIT_19s0090g00750.t01	Wine grape	cytosol	0.75	1.02
Os02t0514700-00	Rice	mitochondrion	0.75	1.01
Os07t0410100-01	Rice	mitochondrion	0.94	0.92
Bra035551.1-P	Field mustard	mitochondrion	0.75	0.92
Os02t0105200-01	Rice	mitochondrion	0.94	0.91
Os04t0394200-01	Rice	mitochondrion	0.75	0.91
KRH73773	Soybean	mitochondrion	0.75	0.86
AT4G26910.1	Thale cress	mitochondrion	0.75	0.86
KRH14369	Soybean	nucleus	0.75	0.86
AT5G55070.1	Thale cress	mitochondrion	0.75	0.86
CDY19918	Canola	mitochondrion	0.75	0.86
CDY20790	Canola	mitochondrion	0.75	0.86
CDY17300	Canola	mitochondrion	0.75	0.86
Bra002934.1-P	Field mustard	mitochondrion	0.75	0.86
CDY06613	Canola	mitochondrion	0.75	0.86
Solyc07g064800.2.1	Tomato	extracellular, nucleus	0.75	0.85
PGSC0003DMT400057449	Potato	mitochondrion	0.75	0.85
PGSC0003DMT400071652	Potato	mitochondrion	0.75	0.85
VIT_10s0116g01480.t01	Wine grape	mitochondrion	0.75	0.85
Bra016809.1-P	Field mustard	mitochondrion, plastid	0.75	0.84
CDY21016	Canola	mitochondrion, plastid	0.75	0.84
CDY31217	Canola	mitochondrion, plastid	0.75	0.83
Os06t0499900-01	Rice	mitochondrion	0.75	0.83
Bra028992.1-P	Field mustard	mitochondrion	0.75	0.81
CDY12012	Canola	plastid	0.75	0.77
CDY36727	Canola	plastid	0.75	0.75
Os06t0105400-02	Rice	mitochondrion	0.75	0.73
Os08t0431300-01	Rice	plastid	0.57	0.63
Os09t0408600-01	Rice	plastid	0.57	0.6
Os12t0182200-01	Rice	plastid	0.19	0.21
GSMUA_Achr10P...	Banana	cytosol, mitochondrion, plastid	0.0	0.0

Protein Annotations

EnsemblPlants:Os01t0314000-01	EnsemblPlantsGene:Os01g0314000	EntrezGene:9272492	InterPro:DUF3615	PANTHER:PTHR33120	PANTHER:PTHR33120:SF6
PFAM:PF12274	ProteinID:BAB92782.1	ProteinID:BAS71798.1	ProteinID:BAS71799.1	ProteinID:EAZ11629.1	RefSeq:XP_015612442.1
SEG:seg	UniParc:UPI00000A85BF	UniProt:Q8LQ82	MapMan:35.2	:	:

Description

Protein of unknown function DUF3615 domain containing protein. (Os01t0314000-01);Protein of unknown function DUF3615 domain containing protein. (Os01t0314000-02);Protein of unknown function DUF3615 domain containing protein. (Os01t0314000-03)

Coordinates

chr1:-:11801395..11803815

Molecular Weight (calculated)

58897.7 Da

IEP (calculated)

4.632

GRAVY (calculated)

-0.517

Length

530 amino acids

Sequence
(BLAST)

001: MNEEVVSAGS PLKASSSPPP LCSFGIWSDQ RKSPRLPWWK QQFISESEED DDEVMPPASH VVEDSDEGEE EEDDDDDDDD DEKVVPPPTP TPPPPQAPEE
101: EEEEARALRR SLLSLIHIDY IEAIRRLPAA DLRTALARGV LVGGHCYGPL HHPADNILLN SIWYAAAFPL HADDRIDVAV ITANSLSRAV QRSLDGLVAS
201: LRHRRPDLSR DDALRHLRAD LRAAVASARG SPPPPLPAES DSEAEAAAYR AAQHPKPAAL AHFLATVLPA VVTDAASVLA GKPSLSSSDI ARVSAMLAPS
301: PLPDEPPQPP LRERSPKIIR IINDRRNNLR GWYKILLQLA NAALRKYAQQ TGEEYELHTI YGETFLKDRN ERAEYIHINF MASPSSCQCL QASPVCFFAE
401: VLRPPRFKYH EADITLCCIV RPSPNDADSC HGCLIENHRI DHPEAGMRFC GKKHSKMDPN GYGHGWDWPS IADVEYRFFD PDKDVGLVEY LDGVITDIKA
501: RIRDLSIRDE DDSDEDSSDD DISGYSMRFV

Best Arabidopsis Sequence Match ( AT2G35330.2 )
(BLAST)

001: MGCTVREKHV RPNRKTRSVK PEFDPCCLLD RTALSKSIVE SSLKHLVYHP GLLDSCPESN PSGSFEDNNG WGYCTEEQLE DILLKHLEYL YNEAISKLVG
101: SGYDEDVALR AVLSNGYCYG GMDVMTNILH NSLAYLKSNT GEGSNVNNED QSETVFTDLR QLEEYSLAGM VYLLQQVKPN LSKGDAMWCL LMSELHVGRA
201: STMDIPSSGK GDSSNVGVGG ASSTVNGVGG AIAPALCRFH GGWGFGNGKG PKFSGNGFSL HSEELTLQRE IDCPRRFNLS PSMKSLLREN VAAFAAGYRA
301: SMEQKKQVQM QSETSGTSLS CTAAATHSEK CEQPHVFGSE ECFSSVLEKF RDLNLDDNVD SAPEELKDDA LIGLLQQVQD LKKQLKERKD WAQKKAMQAA
401: QKVSDELSEL KSLRSEREEI QRVKKGKQTR EDSTLKKLSE MENALRKASG QVDKANAVVR ALENESAEIR AEMEASKLSA SESLTACMEA SKKEKKCLKK
501: LLAWEKQKMK LQDEITAEKE KIKALNRALA QITQEEKEYE AKWRQEQKAK EQVLAQVEEE QRSKEAIEAS NKRKVESLRL KIEIDFQRHK DDLQRLEQEL
601: SRLNKASSTD SSLQSNNTSH TKVKSDKSKG ETMSKLLEEL NRLDGSYEKE ANYDRECLIC MKDEVSVVFL PCAHQVVCAS CSDSFMGSGK ATCPCCRAPV
701: QQRIRVFGAS S

Arabidopsis Description

RING/U-box superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8L7B1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.