Factsheet for Os06t0105400-02

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Os02t0105200-01	mitochondrion, mitochondrion, mitochondrion
Os06t0105400-02	mitochondrion, mitochondrion, mitochondrion
Os07t0410100-01	mitochondrion, mitochondrion, mitochondrion

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G54220.1	Os02t0105200-01	AT1G54220.1	24846799
AT1G54220.1	Os06t0105400-02	AT1G54220.1	24846799
AT1G54220.1	Os07t0410100-01	AT1G54220.1	24846799
AT1G54220.1	Os02t0105200-01	AT3G13930.1	24846799
AT1G54220.1	Os06t0105400-02	AT3G13930.1	24846799
AT1G54220.1	Os07t0410100-01	AT3G13930.1	24846799
AT3G13930.1	Os02t0105200-01	AT3G13930.1	24846799
AT3G13930.1	Os06t0105400-02	AT3G13930.1	24846799
AT3G13930.1	Os07t0410100-01	AT3G13930.1	24846799

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G011600.1	Wheat	golgi, mitochondrion	82.55	83.92
TraesCS7A01G014600.4	Wheat	golgi, mitochondrion	82.36	83.73
TraesCS4A01G481800.3	Wheat	mitochondrion, unclear	82.0	83.67
HORVU7Hr1G001330.9	Barley	plastid	82.73	78.86
Os07t0410100-01	Rice	mitochondrion	74.55	75.79
Os02t0105200-01	Rice	mitochondrion	74.55	74.82
KRH47526	Soybean	mitochondrion	64.0	64.35
KRH06095	Soybean	mitochondrion	63.45	63.8
VIT_11s0016g01870.t01	Wine grape	mitochondrion	62.91	63.25
AT3G13930.1	Thale cress	mitochondrion	61.64	62.89
VIT_09s0002g01800.t01	Wine grape	mitochondrion	63.45	62.88
Bra001531.1-P	Field mustard	mitochondrion, plastid	52.55	62.02
AT1G54220.1	Thale cress	mitochondrion	60.55	61.78
CDX82504	Canola	plastid	60.36	61.71
Bra027386.1-P	Field mustard	mitochondrion	55.64	61.2
Solyc07g006790.2.1	Tomato	plastid	61.45	61.12
Bra037976.1-P	Field mustard	mitochondrion	59.82	60.81
CDX97529	Canola	mitochondrion	62.0	60.68
PGSC0003DMT400048225	Potato	mitochondrion	60.73	60.51
CDY33075	Canola	mitochondrion, plastid	60.91	60.36
CDX75740	Canola	mitochondrion, plastid	61.45	60.25
CDY55206	Canola	mitochondrion	55.82	59.96
CDY24058	Canola	mitochondrion	59.82	59.28
GSMUA_Achr10P...	Banana	mitochondrion, vacuole	64.91	56.22
Os06t0499900-01	Rice	mitochondrion	33.45	38.02
Os12t0182200-01	Rice	plastid	25.45	29.98
Os08t0431300-01	Rice	plastid	25.09	29.05
Os04t0394200-01	Rice	mitochondrion	22.36	27.95
Os02t0514700-00	Rice	mitochondrion	19.09	26.38
Os09t0408600-01	Rice	plastid	23.64	25.95
Os01t0314100-01	Rice	mitochondrion	21.27	22.37
Os01t0314000-01	Rice	cytosol	0.73	0.75

Protein Annotations

KEGG:00010+2.3.1.12	KEGG:00020+2.3.1.12	KEGG:00620+2.3.1.12	InterPro:2-oxoA_DH_lipoyl-BS	InterPro:2-oxoacid_DH_actylTfrase	MapMan:2.2.1.2
Gene3D:2.40.50.100	Gene3D:3.30.559.10	Gene3D:4.10.320.10	EntrezGene:4339859	ProteinID:BAD67701.1	ProteinID:BAF18469.1
ProteinID:BAS95740.1	InterPro:Biotin_lipoyl	InterPro:CAT-like_dom_sf	InterPro:E3-bd_dom_sf	GO:GO:0003674	GO:GO:0003824
GO:GO:0004742	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739
GO:GO:0005759	GO:GO:0006090	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016740
GO:GO:0016746	GO:GO:0045254	InterPro:IPR000089	InterPro:IPR004167	InterPro:IPR023213	InterPro:IPR036625
InterPro:LAT1	EnsemblPlantsGene:Os06g0105400	EnsemblPlants:Os06t0105400-02	PFAM:PF00198	PFAM:PF00364	PFAM:PF02817
ScanProsite:PS00189	PFscan:PS50968	PFscan:PS51826	InterPro:PSBD	PANTHER:PTHR43178	PANTHER:PTHR43178:SF4
UniProt:Q5VS74	SUPFAM:SSF47005	SUPFAM:SSF51230	SUPFAM:SSF52777	InterPro:Single_hybrid_motif	TIGRFAMs:TIGR01349
UniParc:UPI0000457C53	RefSeq:XP_015640864.1	SEG:seg	:	:	:

Description

Similar to dihydrolipoamide S-acetyltransferase. (Os06t0105400-01);Similar to Dihydrolipoamide S-acetyltransferase (EC 2.3.1.12). (Os06t0105400-02)

Coordinates

chr6:-:370273..374951

Molecular Weight (calculated)

59773.1 Da

IEP (calculated)

6.790

GRAVY (calculated)

-0.419

Length

550 amino acids

Sequence
(BLAST)

001: MALLLRHSPK LRRAHAILGC ERGTVVRHFS SSTCSSLVKE DTVSSSNLHP EYAKKIGGSD FSHDRQSGKE LQNFKVSPQE ASRASNFMRA SKYGMPITAN
101: GVHSLFSCGQ VVPSRCFSSG ADLPPHQEIG MPSLSPTMTE GNIARWVKKE GDKVSPGEVL CEVETDKATV EMECMEEGYL AKIIHGDGAK EIKVGEIIAV
201: TVEEEEDIGK FKDYKAPSSA ESAAPAESKP QSEPTEPKKE KEQPKAPEPK ATKTEESFLS EDRTFSSPIA RKLAEDNNVP LSSIKGTGPD GRILKADIED
301: YLASVAKGAK KETAAAPGLG YVDLPNTQIR KVTANRLLHS KQTIPHYYLT VDTRVDKLIK LRSELNPLQD TSGGKKISIN DLVIKAAALA LRNVPECNSS
401: WMNDFIRQYH NVNINVAVQT EDGLFVPVIR DADKKGLATI ADEVKQLAQR ARDNSLKPED YEGGTFTVSN LGGPFGIKQF CAIVNPPQSA ILAIGSAEKR
501: VIPGAEGQFE VGSFMSATLS CDHRVIDGAI GAEWMKAFKG YIENPTTMLL

Best Arabidopsis Sequence Match ( AT1G54220.2 )
(BLAST)

001: MAYASRIINH SKKLKDVSTL LRRENAATIR YYSNTNRAPL NREDTFNSRL GYPPLERISI CSTSTLPVSI IFSTTRSNLS SAMGRPIFGK EFSCLMQSAR
101: GFSSGSDLPP HQEIGMPSLS PTMTEGNIAR WLKKEGDKVA PGEVLCEVET DKATVEMECM EEGYLAKIVK AEGSKEIQVG EVIAITVEDE EDIGKFKDYT
201: PSSTADAAPT KAEPTPAPPK EEKVKQPSSP PEPKASKPST PPTGDRVFAS PLARKLAEDN NVPLSDIEGT GPEGRIVKAD IDEYLASSGK GATAKPSKST
301: DSKAPALDYV DIPHSQIRKV TASRLAFSKQ TIPHYYLTVD TCVDKLMALR SQLNSFKEAS GGKRISVNDL VVKAAALALR KVPQCNSSWT DDYIRQFKNV
401: NINVAVQTEN GLYVPVVKDA DRKGLSTIGE EVRLLAQKAK ENSLKPEDYE GGTFTVSNLG GPFGIKQFCA VVNPPQAAIL AVGSAEKRVV PGNGPDQFNF
501: ASYMPVTLSC DHRVVDGAIG AEWLKAFKGY IENPKSMLL

Arabidopsis Description

Acetyltransferase component of pyruvate dehydrogenase complex [Source:UniProtKB/TrEMBL;Acc:A0A178W5Y1]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.