Factsheet for Bra037976.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 8

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra001531.1-P	mitochondrion
Bra027386.1-P	mitochondrion
Bra037976.1-P	mitochondrion

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G54220.1	Bra037976.1-P	AT1G54220.1	24846799
AT1G54220.1	Bra001531.1-P	AT3G13930.1	24846799
AT1G54220.1	Bra027386.1-P	AT3G13930.1	24846799

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY24058	Canola	mitochondrion	98.52	96.04
AT1G54220.1	Thale cress	mitochondrion	87.06	87.38
Bra027386.1-P	Field mustard	mitochondrion	72.27	78.2
Bra001531.1-P	Field mustard	mitochondrion, plastid	66.54	77.25
KRH06095	Soybean	mitochondrion	67.28	66.54
VIT_11s0016g01870.t01	Wine grape	mitochondrion	66.91	66.18
VIT_09s0002g01800.t01	Wine grape	mitochondrion	67.84	66.13
KRH47526	Soybean	mitochondrion	66.54	65.81
Solyc07g006790.2.1	Tomato	plastid	66.91	65.46
PGSC0003DMT400048225	Potato	mitochondrion	65.99	64.67
HORVU6Hr1G003770.1	Barley	cytosol, mitochondrion	61.74	62.55
EES04754	Sorghum	mitochondrion	62.29	62.52
TraesCS6D01G024400.1	Wheat	golgi, mitochondrion	62.48	62.36
TraesCS6B01G028600.1	Wheat	mitochondrion	61.18	62.22
TraesCS7D01G011600.1	Wheat	golgi, mitochondrion	61.92	61.92
TraesCS6A01G022600.2	Wheat	golgi	61.55	61.9
TraesCS7A01G014600.4	Wheat	golgi, mitochondrion	61.74	61.74
TraesCS4A01G481800.3	Wheat	mitochondrion, unclear	61.0	61.22
Zm00001d053580_P002	Maize	mitochondrion	61.92	60.8
Os07t0410100-01	Rice	mitochondrion	59.89	59.89
Os02t0105200-01	Rice	mitochondrion	60.63	59.85
Os06t0105400-02	Rice	mitochondrion	60.81	59.82
HORVU7Hr1G001330.9	Barley	plastid	60.63	56.85
Zm00001d016365_P002	Maize	mitochondrion	62.29	54.62
GSMUA_Achr10P...	Banana	mitochondrion, vacuole	61.74	52.6
Bra033446.1-P	Field mustard	mitochondrion	38.26	32.29
Bra028057.1-P	Field mustard	plastid	26.8	31.87
Bra025167.1-P	Field mustard	plastid	28.1	31.87
Bra017345.1-P	Field mustard	plastid	27.91	31.52
Bra035551.1-P	Field mustard	mitochondrion	21.81	27.13
Bra002934.1-P	Field mustard	mitochondrion	22.74	26.39
Bra028992.1-P	Field mustard	mitochondrion	22.74	24.9
Bra001220.1-P	Field mustard	mitochondrion	22.74	24.9
Bra016809.1-P	Field mustard	mitochondrion, plastid	21.81	24.84
Bra006910.1-P	Field mustard	mitochondrion	32.9	24.38
Bra040295.1-P	Field mustard	mitochondrion	8.13	17.12

Protein Annotations

KEGG:00010+2.3.1.12	KEGG:00020+2.3.1.12	KEGG:00620+2.3.1.12	InterPro:2-oxoA_DH_lipoyl-BS	InterPro:2-oxoacid_DH_actylTfrase	MapMan:2.2.1.2
Gene3D:2.40.50.100	Gene3D:3.30.559.10	Gene3D:4.10.320.10	InterPro:Biotin_lipoyl	EnsemblPlantsGene:Bra037976	EnsemblPlants:Bra037976.1
EnsemblPlants:Bra037976.1-P	InterPro:CAT-like_dom_sf	InterPro:E3-bd_dom_sf	GO:GO:0003674	GO:GO:0003824	GO:GO:0004742
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005759
GO:GO:0006090	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016740	GO:GO:0016746
GO:GO:0045254	InterPro:IPR000089	InterPro:IPR004167	InterPro:IPR023213	InterPro:IPR036625	InterPro:LAT1
UniProt:M4FA62	PFAM:PF00198	PFAM:PF00364	PFAM:PF02817	ScanProsite:PS00189	PFscan:PS50968
PFscan:PS51826	InterPro:PSBD	PANTHER:PTHR43178	PANTHER:PTHR43178:SF1	SUPFAM:SSF47005	SUPFAM:SSF51230
SUPFAM:SSF52777	InterPro:Single_hybrid_motif	TIGRFAMs:TIGR01349	UniParc:UPI000253E700	SEG:seg	:

Description

AT1G54220 (E=1e-240) | dihydrolipoamide S-acetyltransferase, putative

Coordinates

chrA06:+:329032..332810

Molecular Weight (calculated)

58513.6 Da

IEP (calculated)

7.700

GRAVY (calculated)

-0.395

Length

541 amino acids

Sequence
(BLAST)

001: MAYASRILNH SKKLKDVSTL LRREQAASIR YFSSTNRAPL SREDAFSAHL GFSPVERMTK CSTDIVSICF SNTRTTLRSR VGRPRLGNHF SCSMQSVRGF
101: SSGSDLPPHQ EIGMPSLSPT MTEAGNIAKW LKKEGDKVAP GEVLCEVETD KATVEMECME EGFLAKIVKA EGSKEIQVGE VIAITVEDEE DIGKFKDYTP
201: SSTADASPPK ADAAPPKTDA APPPPKEEKA SPPEPKTSKP GPPPTGDRVF ASPLARKLAE DNNVSLSSIK GTGPEGRIVK ADIEDYLASG GKEATAKQSK
301: VTDSKVPALD YVDIPHSQIR KVTASRLAFS KQTIPHYYLT VDACVDKLMG LRSQLNSFQE ASGGKRISVN DLVVKAAALA LRKVPQCNSS WTDDYIRQFK
401: NVNINVAVQT ENGLYVPVVK DADKKGLSTI GEEVRLLAQK AKENTLKPED YEGGTFTVSN LGGPFGIKQF CAVVNPPQAA ILAVGSAEKR VVPGNGPDEY
501: NFASYMPVTL SCDHRVVDGA IGAEWLKAFK GYIENPESML L

Best Arabidopsis Sequence Match ( AT1G54220.2 )
(BLAST)

001: MAYASRIINH SKKLKDVSTL LRRENAATIR YYSNTNRAPL NREDTFNSRL GYPPLERISI CSTSTLPVSI IFSTTRSNLS SAMGRPIFGK EFSCLMQSAR
101: GFSSGSDLPP HQEIGMPSLS PTMTEGNIAR WLKKEGDKVA PGEVLCEVET DKATVEMECM EEGYLAKIVK AEGSKEIQVG EVIAITVEDE EDIGKFKDYT
201: PSSTADAAPT KAEPTPAPPK EEKVKQPSSP PEPKASKPST PPTGDRVFAS PLARKLAEDN NVPLSDIEGT GPEGRIVKAD IDEYLASSGK GATAKPSKST
301: DSKAPALDYV DIPHSQIRKV TASRLAFSKQ TIPHYYLTVD TCVDKLMALR SQLNSFKEAS GGKRISVNDL VVKAAALALR KVPQCNSSWT DDYIRQFKNV
401: NINVAVQTEN GLYVPVVKDA DRKGLSTIGE EVRLLAQKAK ENSLKPEDYE GGTFTVSNLG GPFGIKQFCA VVNPPQAAIL AVGSAEKRVV PGNGPDQFNF
501: ASYMPVTLSC DHRVVDGAIG AEWLKAFKGY IENPKSMLL

Arabidopsis Description

Acetyltransferase component of pyruvate dehydrogenase complex [Source:UniProtKB/TrEMBL;Acc:A0A178W5Y1]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.