Factsheet for Bra028992.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 4
mitochondrion 8

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra035551.1-P	Field mustard	mitochondrion	83.0	94.25
Bra002934.1-P	Field mustard	mitochondrion	87.45	92.7
AT5G55070.1	Thale cress	mitochondrion	86.03	91.59
CDY36727	Canola	plastid	92.51	85.42
Solyc12g005080.1.1	Tomato	nucleus	59.11	78.92
VIT_19s0090g00750.t01	Wine grape	cytosol	56.28	70.92
Solyc07g064800.2.1	Tomato	extracellular, nucleus	67.0	70.73
PGSC0003DMT400071652	Potato	mitochondrion	67.41	70.7
PGSC0003DMT400057449	Potato	mitochondrion	66.19	69.87
VIT_10s0116g01480.t01	Wine grape	mitochondrion	65.99	68.92
Os04t0394200-01	Rice	mitochondrion	61.34	68.86
TraesCS4D01G070200.1	Wheat	mitochondrion	60.93	68.72
Os02t0514700-00	Rice	mitochondrion	55.26	68.59
GSMUA_Achr3P18670_001	Banana	mitochondrion	62.75	68.58
GSMUA_AchrUn_...	Banana	mitochondrion	62.75	68.58
TraesCS4B01G071300.1	Wheat	mitochondrion	60.73	68.49
KRH14369	Soybean	nucleus	64.17	68.32
TraesCS4A01G243500.1	Wheat	golgi, mitochondrion, unclear	60.53	68.26
KRH73773	Soybean	mitochondrion	63.56	67.67
TraesCS2D01G039500.2	Wheat	mitochondrion	60.53	67.19
TraesCS2A01G041100.1	Wheat	golgi, nucleus, unclear	60.32	66.97
TraesCS2B01G053600.1	Wheat	mitochondrion	57.69	66.74
Bra016809.1-P	Field mustard	mitochondrion, plastid	63.97	66.53
Zm00001d025258_P009	Maize	mitochondrion	59.92	66.37
OQU93042	Sorghum	mitochondrion	61.13	64.67
GSMUA_Achr9P01190_001	Banana	cytosol	63.56	63.18
Zm00001d003923_P002	Maize	mitochondrion	60.32	63.0
HORVU4Hr1G011850.1	Barley	mitochondrion, plastid	60.53	62.82
Bra001531.1-P	Field mustard	mitochondrion, plastid	22.27	23.61
Bra027386.1-P	Field mustard	mitochondrion	23.28	23.0
Bra037976.1-P	Field mustard	mitochondrion	24.9	22.74
Bra017345.1-P	Field mustard	plastid	19.64	20.25
Bra025167.1-P	Field mustard	plastid	19.43	20.13
Bra028057.1-P	Field mustard	plastid	18.22	19.78
Bra033446.1-P	Field mustard	mitochondrion	25.3	19.5
Bra001220.1-P	Field mustard	mitochondrion	18.62	18.62
Os01t0314100-01	Rice	mitochondrion	19.03	17.97
Bra006910.1-P	Field mustard	mitochondrion	22.06	14.93
Bra040295.1-P	Field mustard	mitochondrion	6.28	12.06
Os01t0314000-01	Rice	cytosol	0.81	0.75

Protein Annotations

KEGG:00020+2.3.1.61	KEGG:00310+2.3.1.61	InterPro:2-oxoA_DH_lipoyl-BS	InterPro:2-oxoacid_DH_actylTfrase	MapMan:2.3.4.2	Gene3D:2.40.50.100
Gene3D:3.30.559.10	InterPro:Biotin_lipoyl	EnsemblPlantsGene:Bra028992	EnsemblPlants:Bra028992.1	EnsemblPlants:Bra028992.1-P	InterPro:CAT-like_dom_sf
GO:GO:0003674	GO:GO:0003824	GO:GO:0004149	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006091	GO:GO:0006099	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016740	GO:GO:0016746	GO:GO:0045252	InterPro:IPR000089	InterPro:IPR023213	UniProt:M4EJM6
PFAM:PF00198	PFAM:PF00364	ScanProsite:PS00189	PFscan:PS50968	PANTHER:PTHR43416	PANTHER:PTHR43416:SF5
SUPFAM:SSF51230	SUPFAM:SSF52777	InterPro:Single_hybrid_motif	InterPro:SucB	TIGRFAMs:TIGR01347	UniParc:UPI000253FE82
SEG:seg	:	:	:	:	:

Description

AT5G55070 (E=5e-210) | 2-oxoacid dehydrogenase family protein

Coordinates

chrA03:-:5758727..5761561

Molecular Weight (calculated)

53741.5 Da

IEP (calculated)

9.752

GRAVY (calculated)

-0.183

Length

494 amino acids

Sequence
(BLAST)

001: MLRAVIRRAS SRVSSASSLV SLPFFFLSRS VPYFVIRSFQ KYDTSSLFQG FGKSLQSSRV AASTQSFHSV SSTDTLVPRG SHARSFHHRS CPGCPDCSRT
101: VSSSFRGTTL QRWVRPFSSD SGDVVEAVVP HMGESITDGT LASFLKKPGD RVEADEAIAQ IETDKVTIDI ASPASGVIQE FLVKEGDTVE PGNKVAIIST
201: SADAVSHVAP SEKTAEKLAA KPSPPPAEEP KVESTKVAEK PKAPSPPPPT KQSAKEPQLP PKDRERRVPM TRLRKRVATR LKDSQNTFAL LTTFNEVDMT
301: NLMKLRSQYK DAFFEKHGVK LGLMSGFIKA AVSALQHQPV VNAVIDGDDI IYRDYVDISI AVGTSKGLVV PVIRGADQMN FADIEKTINS LAKKANEGTI
401: SIDEMAGGSF TVSNGGVYGS LISTPIINPP QSAILGMHSI VQRPMVVGGI VVPRPMMYVA RTYDHRLIDG IEAVYFLRRI KDVVEDPQRL LLDI

Best Arabidopsis Sequence Match ( AT5G55070.1 )
(BLAST)

001: MMLRAVFRRA SIRGSSSASG LGKSLQSSRV AVSAQFHSVS ATETLVPRGN HAHSFHHRSC PGCPDCSRTI INGYQGTALQ RWVRPFSSDS GDVVEAVVPH
101: MGESITDGTL AAFLKKPGDR VEADEAIAQI ETDKVTIDIA SPASGVIQEF LVKEGDTVEP GNKVARISTS ADAVSHVAPS EKAPEKPAPK PSPPAEKPKV
201: ESTKVAEKPK APSPPPPPPS KQSAKEPQLP PKDRERRVPM TRLRKRVATR LKDSQNTFAL LTTFNEVDMT NLMKLRSQYK DAFLEKHGVK LGLMSGFIKA
301: AVSALQHQPV VNAVIDGDDI IYRDYVDISI AVGTSKGLVV PVIRDADKMN FADIEKTING LAKKATEGTI SIDEMAGGSF TVSNGGVYGS LISTPIINPP
401: QSAILGMHSI VQRPMVVGGS VVPRPMMYVA LTYDHRLIDG REAVYFLRRI KDVVEDPQRL LLDI

Arabidopsis Description

Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FLQ4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.